RNA–Protein interactions for RNA: YMR050C

YMR050C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YMR050C, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR050CYMR050C LSB5P25369 354 aa2.52□□□□□ -2.01
YMR050CYMR050C MRPL10P36520 322 aa2.52□□□□□ -2.01
YMR050CYMR050C YBR184WP38299 523 aa2.52□□□□□ -2.01
YMR050CYMR050C TIF11P38912 153 aaKnown RBP2.52□□□□□ -2.01
YMR050CYMR050C PCI8P40512 444 aa2.52□□□□□ -2.01
YMR050CYMR050C SCW11P53189 542 aa2.52□□□□□ -2.01
YMR050CYMR050C GET1P53192 235 aa2.52□□□□□ -2.01
YMR050CYMR050C YNL058CP53947 316 aa2.52□□□□□ -2.01
YMR050CYMR050C YET3Q07451 203 aa2.52□□□□□ -2.01
YMR050CYMR050C GYP1Q08484 637 aa2.52□□□□□ -2.01
YMR050CYMR050C YDR215CQ12240 137 aa2.52□□□□□ -2.01
YMR050CYMR050C ZPS1Q12512 249 aa2.52□□□□□ -2.01
YMR050CYMR050C YOR338WQ99326 363 aa2.52□□□□□ -2.01
YMR050CYMR050C GCN2P15442 1659 aa2.52□□□□□ -2.01
YMR050CYMR050C RPB5P20434 215 aa2.51□□□□□ -2.01
YMR050CYMR050C HIR2P32480 875 aa2.51□□□□□ -2.01
YMR050CYMR050C FRE2P36033 711 aa2.51□□□□□ -2.01
YMR050CYMR050C VRP1P37370 817 aa2.51□□□□□ -2.01
YMR050CYMR050C YBR138CP38277 524 aa2.51□□□□□ -2.01
YMR050CYMR050C INM1P38710 295 aa2.51□□□□□ -2.01
YMR050CYMR050C YHR035WP38769 630 aa2.51□□□□□ -2.01
YMR050CYMR050C FSH1P38777 243 aaKnown RBP2.51□□□□□ -2.01
YMR050CYMR050C UME6P39001 836 aa2.51□□□□□ -2.01
YMR050CYMR050C CEM1P39525 442 aa2.51□□□□□ -2.01
YMR050CYMR050C ATF2P53296 535 aa2.51□□□□□ -2.01
YMR050CYMR050C RNH70P53331 553 aa2.51□□□□□ -2.01
YMR050CYMR050C SMM1P53720 384 aaKnown RBP2.51□□□□□ -2.01
YMR050CYMR050C SNO2P53823 222 aa2.51□□□□□ -2.01
YMR050CYMR050C TDA1Q03533 586 aa2.51□□□□□ -2.01
YMR050CYMR050C CGI121Q03705 181 aaKnown RBP2.51□□□□□ -2.01
YMR050CYMR050C NHX1Q04121 633 aa2.51□□□□□ -2.01
YMR050CYMR050C ATG26Q06321 1198 aa2.51□□□□□ -2.01
YMR050CYMR050C HER1Q12276 1246 aa2.51□□□□□ -2.01
YMR050CYMR050C LPX1Q12405 387 aaKnown RBP2.51□□□□□ -2.01
YMR050CYMR050C RTN2Q12443 393 aa2.51□□□□□ -2.01
YMR050CYMR050C YLR462WO13556 202 aa2.51□□□□□ -2.01
YMR050CYMR050C TDH2P00358 332 aaKnown RBP2.51□□□□□ -2.01
YMR050CYMR050C TDH3P00359 332 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
YMR050CYMR050C MPH2P0CD99 609 aa2.51□□□□□ -2.01
YMR050CYMR050C NFT1P0CE68 1218 aa2.51□□□□□ -2.01
YMR050CYMR050C ZWF1P11412 505 aaKnown RBP2.51□□□□□ -2.01
YMR050CYMR050C URA4P20051 364 aa2.51□□□□□ -2.01
YMR050CYMR050C ERG4P25340 473 aa2.51□□□□□ -2.01
YMR050CYMR050C PUB1P32588 453 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
YMR050CYMR050C PEX6P33760 1030 aa2.51□□□□□ -2.01
YMR050CYMR050C RCN1P36054 211 aa2.51□□□□□ -2.01
YMR050CYMR050C ECM31P38122 312 aa2.51□□□□□ -2.01
YMR050CYMR050C YHL049CP38722 271 aa2.51□□□□□ -2.01
YMR050CYMR050C MET30P39014 640 aa2.51□□□□□ -2.01
YMR050CYMR050C YEL075CP39972 122 aa2.51□□□□□ -2.01
YMR050CYMR050C YER186CP40101 306 aa2.51□□□□□ -2.01
YMR050CYMR050C YER189WP40104 122 aa2.51□□□□□ -2.01
YMR050CYMR050C YFL064CP43540 174 aa2.51□□□□□ -2.01
YMR050CYMR050C IKS1P47042 667 aa2.51□□□□□ -2.01
YMR050CYMR050C LCL3P53153 274 aa2.51□□□□□ -2.01
YMR050CYMR050C COQ9Q05779 260 aa2.51□□□□□ -2.01
YMR050CYMR050C CDC123Q05791 360 aa2.51□□□□□ -2.01
YMR050CYMR050C DCR2Q05924 578 aa2.51□□□□□ -2.01
YMR050CYMR050C UPC2Q12151 913 aa2.51□□□□□ -2.01
YMR050CYMR050C PRS5Q12265 496 aaKnown RBP2.51□□□□□ -2.01
YMR050CYMR050C PEX11Q12462 236 aa2.51□□□□□ -2.01
YMR050CYMR050C APM4Q99186 491 aa2.51□□□□□ -2.01
YMR050CYMR050C CHC1P22137 1653 aaKnown RBP2.51□□□□□ -2.01
YMR050CYMR050C NUP188P52593 1655 aaKnown RBP2.51□□□□□ -2.01
YMR050CYMR050C PHO84P25297 587 aaKnown RBP2.51□□□□□ -2.01
YMR050CYMR050C FLR1P38124 548 aa2.51□□□□□ -2.01
YMR050CYMR050C QNS1P38795 714 aaKnown RBP2.51□□□□□ -2.01
YMR050CYMR050C ECM14P38836 430 aa2.51□□□□□ -2.01
YMR050CYMR050C VMA7P39111 118 aa2.51□□□□□ -2.01
YMR050CYMR050C RPS26AP39938 119 aaKnown RBP2.51□□□□□ -2.01
YMR050CYMR050C RPS26BP39939 119 aaKnown RBP2.51□□□□□ -2.01
YMR050CYMR050C PRE6P40303 254 aaKnown RBP2.51□□□□□ -2.01
YMR050CYMR050C SFH5P47008 294 aa2.51□□□□□ -2.01
YMR050CYMR050C YGL260WP53056 76 aa2.51□□□□□ -2.01
YMR050CYMR050C SYF2P53277 215 aaPredicted RBP2.51□□□□□ -2.01
YMR050CYMR050C ALO1P54783 526 aaKnown RBP2.51□□□□□ -2.01
YMR050CYMR050C TRS31Q03337 283 aa2.51□□□□□ -2.01
YMR050CYMR050C SMA2Q04658 369 aa2.51□□□□□ -2.01
YMR050CYMR050C YPR022CQ12139 1133 aa2.51□□□□□ -2.01
YMR050CYMR050C MMP1Q12372 583 aa2.51□□□□□ -2.01
YMR050CYMR050C PSF1Q12488 208 aa2.51□□□□□ -2.01
YMR050CYMR050C SKS1Q12505 502 aa2.51□□□□□ -2.01
YMR050CYMR050C HSH49Q99181 213 aaPredicted RBP2.51□□□□□ -2.01
YMR050CYMR050C ARF1P11076 181 aaKnown RBP2.51□□□□□ -2.01
YMR050CYMR050C NRP1P32770 719 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
YMR050CYMR050C SSO2P39926 295 aa2.51□□□□□ -2.01
YMR050CYMR050C GTS1P40956 396 aa2.51□□□□□ -2.01
YMR050CYMR050C YAR1P46683 200 aa2.51□□□□□ -2.01
YMR050CYMR050C MUP1P50276 574 aa2.51□□□□□ -2.01
YMR050CYMR050C AAH1P53909 347 aa2.51□□□□□ -2.01
YMR050CYMR050C YNL092WP53934 400 aa2.51□□□□□ -2.01
YMR050CYMR050C RHO3Q00245 231 aaKnown RBP2.51□□□□□ -2.01
YMR050CYMR050C MET31Q03081 177 aa2.51□□□□□ -2.01
YMR050CYMR050C GAS3Q03655 524 aa2.51□□□□□ -2.01
YMR050CYMR050C CUE5Q08412 411 aaKnown RBP2.51□□□□□ -2.01
YMR050CYMR050C YLR122CQ12312 125 aa2.51□□□□□ -2.01
YMR050CYMR050C DCP1Q12517 231 aaPredicted RBP2.51□□□□□ -2.01
YMR050CYMR050C RPL40AP0CH08 128 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C RPL40BP0CH09 128 aaKnown RBP2.5□□□□□ -2.01
YMR050CYMR050C KGD1P20967 1014 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 81.9 ms