RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeastyeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PML39YML107C LDB16P25587 256 aa3.45□□□□□ -1.86
PML39YML107C CHK1P38147 527 aa3.45□□□□□ -1.86
PML39YML107C JLP2P40206 208 aa3.45□□□□□ -1.86
PML39YML107C GAT2P40209 560 aa3.45□□□□□ -1.86
PML39YML107C YIL029CP40538 142 aa3.45□□□□□ -1.86
PML39YML107C BUD27P43573 796 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
PML39YML107C TOM22P49334 152 aa3.45□□□□□ -1.86
PML39YML107C NUP116Q02630 1113 aa3.45□□□□□ -1.86
PML39YML107C CCE1Q03702 353 aa3.45□□□□□ -1.86
PML39YML107C PRP42Q03776 544 aaKnown RBP3.45□□□□□ -1.86
PML39YML107C RPN9Q04062 393 aaKnown RBP3.45□□□□□ -1.86
PML39YML107C IMA2Q08295 589 aa3.45□□□□□ -1.86
PML39YML107C RUP1Q12242 671 aa3.45□□□□□ -1.86
PML39YML107C HRT3Q12347 344 aa3.45□□□□□ -1.86
PML39YML107C ERP4Q12450 207 aa3.45□□□□□ -1.86
PML39YML107C ADH2P00331 348 aaKnown RBP3.44□□□□□ -1.86
PML39YML107C COX3P00420 269 aa3.44□□□□□ -1.86
PML39YML107C CYC3P06182 269 aa3.44□□□□□ -1.86
PML39YML107C ARO3P14843 370 aaKnown RBP3.44□□□□□ -1.86
PML39YML107C YCL068CP25593 260 aa3.44□□□□□ -1.86
PML39YML107C CDC60P26637 1090 aaKnown RBP3.44□□□□□ -1.86
PML39YML107C LTV1P34078 463 aa3.44□□□□□ -1.86
PML39YML107C RRP1P35178 278 aaPredicted RBP3.44□□□□□ -1.86
PML39YML107C SWD3P38123 315 aa3.44□□□□□ -1.86
PML39YML107C COX14P39103 70 aa3.44□□□□□ -1.86
PML39YML107C ALF1P53904 254 aa3.44□□□□□ -1.86
PML39YML107C MTQ1P53944 314 aa3.44□□□□□ -1.86
PML39YML107C HSP104P31539 908 aaKnown RBP3.43□□□□□ -1.86
PML39YML107C NIP1P32497 812 aaKnown RBP3.43□□□□□ -1.86
PML39YML107C MRPL4P36517 319 aa3.43□□□□□ -1.86
PML39YML107C PRE5P40302 234 aaKnown RBP3.43□□□□□ -1.86
PML39YML107C YPS6P40583 537 aa3.43□□□□□ -1.86
PML39YML107C MDE1P47095 244 aa3.43□□□□□ -1.86
PML39YML107C RSC1P53236 928 aa3.43□□□□□ -1.86
PML39YML107C IRC25Q07951 179 aa3.43□□□□□ -1.86
PML39YML107C RAX1Q08760 435 aa3.43□□□□□ -1.86
PML39YML107C NCA2Q12374 616 aa3.43□□□□□ -1.86
PML39YML107C SNU66Q12420 587 aaPredicted RBP3.43□□□□□ -1.86
PML39YML107C CEX1Q12453 761 aa3.43□□□□□ -1.86
PML39YML107C MRPL10P36520 322 aa3.42□□□□□ -1.86
PML39YML107C MMF1P40185 145 aaKnown RBP3.42□□□□□ -1.86
PML39YML107C YJL055WP47044 245 aa3.42□□□□□ -1.86
PML39YML107C ADA2Q02336 434 aa3.42□□□□□ -1.86
PML39YML107C SNT309Q06091 175 aaPredicted RBP3.42□□□□□ -1.86
PML39YML107C YLR456WQ06199 204 aa3.42□□□□□ -1.86
PML39YML107C TMC1Q08422 150 aaPredicted RBP3.42□□□□□ -1.86
PML39YML107C UAF30Q08747 228 aa3.42□□□□□ -1.86
PML39YML107C SPE3Q12074 293 aaKnown RBP3.42□□□□□ -1.86
PML39YML107C ISY1P21374 235 aaPredicted RBP3.41□□□□□ -1.86
PML39YML107C KAR9P32526 644 aa3.41□□□□□ -1.86
PML39YML107C COX13P32799 129 aa3.41□□□□□ -1.86
PML39YML107C PEX5P35056 612 aa3.41□□□□□ -1.86
PML39YML107C INM1P38710 295 aa3.41□□□□□ -1.86
PML39YML107C STN1P38960 494 aa3.41□□□□□ -1.86
PML39YML107C LCB2P40970 561 aa3.41□□□□□ -1.86
PML39YML107C TOS3P43637 560 aa3.41□□□□□ -1.86
PML39YML107C VPS9P54787 451 aa3.41□□□□□ -1.86
PML39YML107C WTM1Q12363 437 aaKnown RBP3.41□□□□□ -1.86
PML39YML107C ATP1P07251 545 aaKnown RBP3.4□□□□□ -1.87
PML39YML107C ALG1P16661 449 aa3.4□□□□□ -1.87
PML39YML107C MNE1P24720 663 aa3.4□□□□□ -1.87
PML39YML107C PHO91P27514 894 aa3.4□□□□□ -1.87
PML39YML107C SKN1P33336 771 aa3.4□□□□□ -1.87
PML39YML107C RRP46P53256 223 aaPredicted RBP3.4□□□□□ -1.87
PML39YML107C ADD37Q03233 198 aa3.4□□□□□ -1.87
PML39YML107C RBD2Q12270 262 aa3.4□□□□□ -1.87
PML39YML107C YRF1-1P0CX20 1796 aa3.4□□□□□ -1.87
PML39YML107C YRF1-5P0CX21 1796 aa3.4□□□□□ -1.87
PML39YML107C YRF1-8P0CX22 1796 aa3.4□□□□□ -1.87
PML39YML107C SLM5P25345 492 aaKnown RBP3.39□□□□□ -1.87
PML39YML107C CSE2P33308 149 aa3.39□□□□□ -1.87
PML39YML107C SBE22P38814 852 aa3.39□□□□□ -1.87
PML39YML107C MAM33P40513 266 aa3.39□□□□□ -1.87
PML39YML107C ROG1P53118 685 aa3.39□□□□□ -1.87
PML39YML107C MRM2P53123 320 aa3.39□□□□□ -1.87
PML39YML107C SHY1P53266 389 aa3.39□□□□□ -1.87
PML39YML107C YMR027WQ04371 470 aa3.39□□□□□ -1.87
PML39YML107C YDR341CQ05506 607 aaKnown RBP3.39□□□□□ -1.87
PML39YML107C FDH1Q08911 376 aa3.39□□□□□ -1.87
PML39YML107C RPN5Q12250 445 aaKnown RBP3.39□□□□□ -1.87
PML39YML107C CAP2P13517 287 aa3.38□□□□□ -1.87
PML39YML107C EXG1P23776 448 aaKnown RBP3.38□□□□□ -1.87
PML39YML107C YHR131CP38835 850 aa3.38□□□□□ -1.87
PML39YML107C GDI1P39958 451 aaKnown RBP3.38□□□□□ -1.87
PML39YML107C HAC1P41546 238 aa3.38□□□□□ -1.87
PML39YML107C YJR085CP47131 105 aaKnown RBP3.38□□□□□ -1.87
PML39YML107C SPR6Q01684 191 aa3.38□□□□□ -1.87
PML39YML107C MHR1Q06630 226 aa3.38□□□□□ -1.87
PML39YML107C MDM36Q06820 579 aa3.38□□□□□ -1.87
PML39YML107C NSE1Q07913 336 aa3.38□□□□□ -1.87
PML39YML107C LOT6Q07923 191 aa3.38□□□□□ -1.87
PML39YML107C EAF3Q12432 401 aa3.38□□□□□ -1.87
PML39YML107C IZH2Q12442 317 aa3.38□□□□□ -1.87
PML39YML107C VPS13Q07878 3144 aa3.38□□□□□ -1.87
PML39YML107C PHA2P32452 334 aa3.37□□□□□ -1.87
PML39YML107C NRP1P32770 719 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
PML39YML107C YKL097CP34245 136 aa3.37□□□□□ -1.87
PML39YML107C LRP1P38801 184 aaKnown RBP3.37□□□□□ -1.87
PML39YML107C GPI16P38875 610 aa3.37□□□□□ -1.87
PML39YML107C ATM1P40416 690 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms