RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W TY2B-OR1Q12113 1770 aa0.57□□□□□ -2.32
PRP39YML046W TY2B-DR1Q12472 1770 aa0.57□□□□□ -2.32
PRP39YML046W TY2B-OR2Q12501 1770 aa0.57□□□□□ -2.32
PRP39YML046W RHO2P06781 192 aa0.56□□□□□ -2.32
PRP39YML046W RPS19AP07280 144 aaKnown RBP0.56□□□□□ -2.32
PRP39YML046W RPS19BP07281 144 aaPredicted RBP0.56□□□□□ -2.32
PRP39YML046W KAR3P17119 729 aa0.56□□□□□ -2.32
PRP39YML046W HAC1P41546 238 aa0.56□□□□□ -2.32
PRP39YML046W SLG1P54867 378 aa0.56□□□□□ -2.32
PRP39YML046W AVL9Q12500 764 aa0.56□□□□□ -2.32
PRP39YML046W YPT6Q99260 215 aa0.56□□□□□ -2.32
PRP39YML046W RAD9P14737 1309 aa0.56□□□□□ -2.32
PRP39YML046W ATP10P18496 279 aa0.56□□□□□ -2.32
PRP39YML046W CHS3P29465 1165 aa0.56□□□□□ -2.32
PRP39YML046W COX13P32799 129 aa0.56□□□□□ -2.32
PRP39YML046W PRY2P36110 329 aa0.56□□□□□ -2.32
PRP39YML046W CCT6P39079 546 aa0.56□□□□□ -2.32
PRP39YML046W COX14P39103 70 aa0.56□□□□□ -2.32
PRP39YML046W JLP2P40206 208 aa0.56□□□□□ -2.32
PRP39YML046W MAM33P40513 266 aa0.56□□□□□ -2.32
PRP39YML046W IGD1P43598 195 aa0.56□□□□□ -2.32
PRP39YML046W PET130P47065 347 aa0.56□□□□□ -2.32
PRP39YML046W RPN14P53196 417 aa0.56□□□□□ -2.32
PRP39YML046W HSP31Q04432 237 aa0.56□□□□□ -2.32
PRP39YML046W RTN1Q04947 295 aaKnown RBP0.56□□□□□ -2.32
PRP39YML046W YRA1Q12159 226 aaKnown RBP0.56□□□□□ -2.32
PRP39YML046W YDR061WQ12298 539 aa0.56□□□□□ -2.32
PRP39YML046W PDR12Q02785 1511 aa0.56□□□□□ -2.32
PRP39YML046W GAL80P04387 435 aa0.55□□□□□ -2.32
PRP39YML046W PUT4P15380 627 aa0.55□□□□□ -2.32
PRP39YML046W ZRC1P20107 442 aa0.55□□□□□ -2.32
PRP39YML046W IDH2P28241 369 aaKnown RBP0.55□□□□□ -2.32
PRP39YML046W AFG1P32317 509 aa0.55□□□□□ -2.32
PRP39YML046W MRS6P32864 603 aaKnown RBP0.55□□□□□ -2.32
PRP39YML046W THI2P38141 450 aa0.55□□□□□ -2.32
PRP39YML046W MUM2P38236 366 aa0.55□□□□□ -2.32
PRP39YML046W KEL1P38853 1164 aaKnown RBP0.55□□□□□ -2.32
PRP39YML046W PCF11P39081 626 aaPredicted RBP0.55□□□□□ -2.32
PRP39YML046W YNL208WP40159 199 aaKnown RBP0.55□□□□□ -2.32
PRP39YML046W GAT2P40209 560 aa0.55□□□□□ -2.32
PRP39YML046W HMS2P47175 358 aa0.55□□□□□ -2.32
PRP39YML046W YGL108CP53139 140 aa0.55□□□□□ -2.32
PRP39YML046W YGR066CP53242 292 aa0.55□□□□□ -2.32
PRP39YML046W YGK3Q12222 375 aaPredicted RBP0.55□□□□□ -2.32
PRP39YML046W SNU66Q12420 587 aaPredicted RBP0.55□□□□□ -2.32
PRP39YML046W URB1P34241 1764 aaKnown RBP0.55□□□□□ -2.32
PRP39YML046W CYM1P32898 989 aa0.54□□□□□ -2.32
PRP39YML046W TOM20P35180 183 aa0.54□□□□□ -2.32
PRP39YML046W MRPL27P36526 146 aaPredicted RBP0.54□□□□□ -2.32
PRP39YML046W YHR054CP38780 354 aa0.54□□□□□ -2.32
PRP39YML046W SHC1P39000 512 aa0.54□□□□□ -2.32
PRP39YML046W ALD5P40047 520 aaKnown RBP0.54□□□□□ -2.32
PRP39YML046W ESL1P40456 1118 aa0.54□□□□□ -2.32
PRP39YML046W CPR7P47103 393 aa0.54□□□□□ -2.32
PRP39YML046W BCH1Q05029 724 aa0.54□□□□□ -2.32
PRP39YML046W YLR345WQ06137 509 aa0.54□□□□□ -2.32
PRP39YML046W PIN3Q06449 215 aa0.54□□□□□ -2.32
PRP39YML046W HRT1Q08273 121 aa0.54□□□□□ -2.32
PRP39YML046W YDL007C-AQ2V2Q0 85 aa0.54□□□□□ -2.32
PRP39YML046W TY3B-IQ7LHG5 1498 aaKnown RBP0.54□□□□□ -2.32
PRP39YML046W TY2B-BQ12491 1770 aa0.54□□□□□ -2.32
PRP39YML046W PRD1P25375 712 aa0.54□□□□□ -2.32
PRP39YML046W RAD14P28519 371 aa0.54□□□□□ -2.32
PRP39YML046W UTR5P32630 166 aa0.54□□□□□ -2.32
PRP39YML046W RRN3P36070 627 aa0.54□□□□□ -2.32
PRP39YML046W UIP5P36137 443 aa0.54□□□□□ -2.32
PRP39YML046W DPH1P40487 425 aaKnown RBP0.54□□□□□ -2.32
PRP39YML046W LYS14P40971 790 aa0.54□□□□□ -2.32
PRP39YML046W EGT2P42835 1041 aa0.54□□□□□ -2.32
PRP39YML046W ATG18P43601 500 aa0.54□□□□□ -2.32
PRP39YML046W SFH5P47008 294 aa0.54□□□□□ -2.32
PRP39YML046W PGU1P47180 361 aa0.54□□□□□ -2.32
PRP39YML046W MST27P53176 234 aa0.54□□□□□ -2.32
PRP39YML046W CLD1P53264 445 aa0.54□□□□□ -2.32
PRP39YML046W BUG1Q12191 341 aa0.54□□□□□ -2.32
PRP39YML046W NAG1Q8TGN9 163 aa0.54□□□□□ -2.32
PRP39YML046W TUS1Q06412 1307 aa0.54□□□□□ -2.32
PRP39YML046W TY1B-JR2P47100 1755 aaKnown RBP0.53□□□□□ -2.32
PRP39YML046W TY1B-ER2Q03619 1755 aa0.53□□□□□ -2.32
PRP39YML046W TY1B-MR1Q04214 1755 aa0.53□□□□□ -2.32
PRP39YML046W TY1B-MR2Q04670 1755 aaKnown RBP0.53□□□□□ -2.32
PRP39YML046W TY1B-LR1Q12088 1755 aaKnown RBP0.53□□□□□ -2.32
PRP39YML046W TY1B-NL1Q12112 1755 aa0.53□□□□□ -2.32
PRP39YML046W TY1B-GR1Q12141 1755 aa0.53□□□□□ -2.32
PRP39YML046W TY1B-BLQ12490 1755 aa0.53□□□□□ -2.32
PRP39YML046W RPL19AP0CX82 189 aaKnown RBP0.53□□□□□ -2.32
PRP39YML046W RPL19BP0CX83 189 aaPredicted RBP0.53□□□□□ -2.32
PRP39YML046W ZIP1P31111 875 aa0.53□□□□□ -2.32
PRP39YML046W DEP1P31385 405 aa0.53□□□□□ -2.32
PRP39YML046W TFB1P32776 642 aa0.53□□□□□ -2.32
PRP39YML046W ECT1P33412 323 aa0.53□□□□□ -2.32
PRP39YML046W AST1P35183 429 aa0.53□□□□□ -2.32
PRP39YML046W SBE22P38814 852 aa0.53□□□□□ -2.32
PRP39YML046W PFS1P38872 237 aa0.53□□□□□ -2.32
PRP39YML046W SPO73P40031 143 aa0.53□□□□□ -2.32
PRP39YML046W YMR147WP40218 223 aaKnown RBP0.53□□□□□ -2.32
PRP39YML046W TFG2P41896 400 aaPredicted RBP0.53□□□□□ -2.32
PRP39YML046W STB1P42845 420 aa0.53□□□□□ -2.32
PRP39YML046W MRM2P53123 320 aa0.53□□□□□ -2.32
PRP39YML046W YGR067CP53243 804 aa0.53□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms