RNA–Protein interactions for RNA: YFL028C

CAF16, Transcript of Part of evolutionarily-conserved CCR4-NOT regulatory complex, yeastyeast

Gene CAF16, Length 870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF16YFL028C PHO84P25297 587 aaKnown RBP4.52□□□□□ -1.69
CAF16YFL028C ERG1P32476 496 aaKnown RBP4.52□□□□□ -1.69
CAF16YFL028C SMI1P32566 505 aa4.52□□□□□ -1.69
CAF16YFL028C YNK1P36010 153 aaKnown RBP4.52□□□□□ -1.69
CAF16YFL028C DAD2P36162 133 aa4.52□□□□□ -1.69
CAF16YFL028C YSW1P38280 609 aa4.52□□□□□ -1.69
CAF16YFL028C RRP3P38712 501 aaKnown RBP4.52□□□□□ -1.69
CAF16YFL028C RRP4P38792 359 aaKnown RBP4.52□□□□□ -1.69
CAF16YFL028C HMF1P40037 129 aaKnown RBP4.52□□□□□ -1.69
CAF16YFL028C YJR011CP47086 261 aaPredicted RBP4.52□□□□□ -1.69
CAF16YFL028C CUE3P53137 624 aaKnown RBP4.52□□□□□ -1.69
CAF16YFL028C PCP1P53259 346 aa4.52□□□□□ -1.69
CAF16YFL028C PGA2P53903 129 aa4.52□□□□□ -1.69
CAF16YFL028C RPL6AQ02326 176 aaKnown RBP4.52□□□□□ -1.69
CAF16YFL028C YDR061WQ12298 539 aa4.52□□□□□ -1.69
CAF16YFL028C CLN3P13365 580 aa4.51□□□□□ -1.69
CAF16YFL028C EXO70P19658 623 aa4.51□□□□□ -1.69
CAF16YFL028C BMH1P29311 267 aaKnown RBP4.51□□□□□ -1.69
CAF16YFL028C TVP38P36164 337 aa4.51□□□□□ -1.69
CAF16YFL028C ADH5P38113 351 aaKnown RBP4.51□□□□□ -1.69
CAF16YFL028C SIF2P38262 535 aa4.51□□□□□ -1.69
CAF16YFL028C PCA1P38360 1216 aa4.51□□□□□ -1.69
CAF16YFL028C YTA12P40341 825 aa4.51□□□□□ -1.69
CAF16YFL028C FIS1P40515 155 aa4.51□□□□□ -1.69
CAF16YFL028C RLI1Q03195 608 aaKnown RBP4.51□□□□□ -1.69
CAF16YFL028C YMR254CQ04838 102 aa4.51□□□□□ -1.69
CAF16YFL028C FUS2Q05670 677 aa4.51□□□□□ -1.69
CAF16YFL028C UBX3Q12229 455 aa4.51□□□□□ -1.69
CAF16YFL028C COX3P00420 269 aa4.5□□□□□ -1.69
CAF16YFL028C YPT1P01123 206 aaKnown RBP4.5□□□□□ -1.69
CAF16YFL028C CKA2P19454 339 aa4.5□□□□□ -1.69
CAF16YFL028C UIP5P36137 443 aa4.5□□□□□ -1.69
CAF16YFL028C SIP3P38717 1229 aa4.5□□□□□ -1.69
CAF16YFL028C ISC1P40015 477 aaKnown RBP4.5□□□□□ -1.69
CAF16YFL028C GUF1P46943 645 aa4.5□□□□□ -1.69
CAF16YFL028C TRS85P46944 698 aa4.5□□□□□ -1.69
CAF16YFL028C DIG1Q03063 452 aaKnown RBP4.5□□□□□ -1.69
CAF16YFL028C YMR034CQ05131 434 aaPredicted RBP4.5□□□□□ -1.69
CAF16YFL028C MRPL51Q06090 140 aaPredicted RBP4.5□□□□□ -1.69
CAF16YFL028C SYO1Q07395 620 aa4.5□□□□□ -1.69
CAF16YFL028C MLH2Q07980 695 aa4.5□□□□□ -1.69
CAF16YFL028C DDP1Q99321 188 aaKnown RBP4.5□□□□□ -1.69
CAF16YFL028C RIF1P29539 1916 aa4.5□□□□□ -1.69
CAF16YFL028C STF1P01098 86 aa4.49□□□□□ -1.69
CAF16YFL028C ADE4P04046 510 aaKnown RBP4.49□□□□□ -1.69
CAF16YFL028C TCP1P12612 559 aaKnown RBP4.49□□□□□ -1.69
CAF16YFL028C SNA3P14359 133 aa4.49□□□□□ -1.69
CAF16YFL028C GLN3P18494 730 aa4.49□□□□□ -1.69
CAF16YFL028C DAP2P18962 818 aa4.49□□□□□ -1.69
CAF16YFL028C HNM1P19807 563 aa4.49□□□□□ -1.69
CAF16YFL028C ISY1P21374 235 aaPredicted RBP4.49□□□□□ -1.69
CAF16YFL028C RME1P32338 300 aaKnown RBP4.49□□□□□ -1.69
CAF16YFL028C RSM22P36056 628 aa4.49□□□□□ -1.69
CAF16YFL028C MLH1P38920 769 aa4.49□□□□□ -1.69
CAF16YFL028C PHO86P46956 311 aa4.49□□□□□ -1.69
CAF16YFL028C IRC15Q02733 499 aa4.49□□□□□ -1.69
CAF16YFL028C BNA5Q05979 453 aa4.49□□□□□ -1.69
CAF16YFL028C YEH2Q07950 538 aa4.49□□□□□ -1.69
CAF16YFL028C YDL009CQ12210 107 aa4.49□□□□□ -1.69
CAF16YFL028C TFB5Q3E7C1 72 aaPredicted RBP4.49□□□□□ -1.69
CAF16YFL028C AMD1P15274 810 aaKnown RBP4.48□□□□□ -1.69
CAF16YFL028C ECM25P32525 599 aa4.48□□□□□ -1.69
CAF16YFL028C TRS65P32893 560 aa4.48□□□□□ -1.69
CAF16YFL028C YKT6P36015 200 aaKnown RBP4.48□□□□□ -1.69
CAF16YFL028C FRE2P36033 711 aa4.48□□□□□ -1.69
CAF16YFL028C MRPL4P36517 319 aa4.48□□□□□ -1.69
CAF16YFL028C YCR041WP37265 110 aa4.48□□□□□ -1.69
CAF16YFL028C OLA1P38219 394 aaKnown RBP4.48□□□□□ -1.69
CAF16YFL028C PCF11P39081 626 aaPredicted RBP4.48□□□□□ -1.69
CAF16YFL028C SAD1P43589 448 aa4.48□□□□□ -1.69
CAF16YFL028C ROG1P53118 685 aa4.48□□□□□ -1.69
CAF16YFL028C ARK1P53974 638 aa4.48□□□□□ -1.69
CAF16YFL028C GIP3Q03016 1276 aa4.48□□□□□ -1.69
CAF16YFL028C RPN9Q04062 393 aaKnown RBP4.48□□□□□ -1.69
CAF16YFL028C RPL22AP05749 121 aaKnown RBP4.47□□□□□ -1.69
CAF16YFL028C YFL068WP0CX99 160 aa4.47□□□□□ -1.69
CAF16YFL028C YLL066W-AP0CY00 160 aa4.47□□□□□ -1.69
CAF16YFL028C YLL067W-AP0CY01 160 aa4.47□□□□□ -1.69
CAF16YFL028C PHO91P27514 894 aa4.47□□□□□ -1.69
CAF16YFL028C RRP1P35178 278 aaPredicted RBP4.47□□□□□ -1.69
CAF16YFL028C ASK1P35734 292 aa4.47□□□□□ -1.69
CAF16YFL028C ELP2P42935 788 aa4.47□□□□□ -1.69
CAF16YFL028C MDE1P47095 244 aa4.47□□□□□ -1.69
CAF16YFL028C AZR1P50080 613 aa4.47□□□□□ -1.69
CAF16YFL028C YIP1P53039 248 aa4.47□□□□□ -1.69
CAF16YFL028C YIP5P53108 310 aa4.47□□□□□ -1.69
CAF16YFL028C SCW4P53334 386 aaKnown RBP4.47□□□□□ -1.69
CAF16YFL028C DBP9Q06218 594 aaKnown RBP4.47□□□□□ -1.69
CAF16YFL028C PML1Q07930 204 aaPredicted RBP4.47□□□□□ -1.69
CAF16YFL028C SMC5Q08204 1093 aa4.47□□□□□ -1.69
CAF16YFL028C YLL056CQ12177 298 aa4.47□□□□□ -1.69
CAF16YFL028C YDR524C-BQ3E6R4 66 aa4.47□□□□□ -1.69
CAF16YFL028C YAR066WP0CX18 203 aa4.46□□□□□ -1.7
CAF16YFL028C YHR214WP0CX19 203 aa4.46□□□□□ -1.7
CAF16YFL028C YSC83P32792 385 aa4.46□□□□□ -1.7
CAF16YFL028C RPS0AP32905 252 aaKnown RBP4.46□□□□□ -1.7
CAF16YFL028C SIP2P34164 415 aaKnown RBP4.46□□□□□ -1.7
CAF16YFL028C GDT1P38301 280 aaPredicted RBP4.46□□□□□ -1.7
CAF16YFL028C SPC97P38863 823 aa4.46□□□□□ -1.7
CAF16YFL028C GPI16P38875 610 aa4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 89.7 ms