RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeast

Gene RPB7, Length 516 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB7	YDR404C	ERG1	P32476	496 aa	Known RBP	4.24	□□□□□ -1.73
RPB7	YDR404C	SMI1	P32566	505 aa		4.24	□□□□□ -1.73
RPB7	YDR404C	MIC60	P36112	540 aa		4.24	□□□□□ -1.73
RPB7	YDR404C	NDT80	P38830	627 aa		4.24	□□□□□ -1.73
RPB7	YDR404C	TRS85	P46944	698 aa		4.24	□□□□□ -1.73
RPB7	YDR404C	YDR415C	Q04033	374 aa	Predicted RBP	4.24	□□□□□ -1.73
RPB7	YDR404C	SUE1	Q06524	206 aa		4.24	□□□□□ -1.73
RPB7	YDR404C	SYO1	Q07395	620 aa		4.24	□□□□□ -1.73
RPB7	YDR404C	ADE4	P04046	510 aa	Known RBP	4.23	□□□□□ -1.73
RPB7	YDR404C	RPL6B	P05739	176 aa	Known RBP	4.23	□□□□□ -1.73
RPB7	YDR404C	TRX1	P22217	103 aa	Known RBP	4.23	□□□□□ -1.73
RPB7	YDR404C	SPC110	P32380	944 aa		4.23	□□□□□ -1.73
RPB7	YDR404C	ECM25	P32525	599 aa		4.23	□□□□□ -1.73
RPB7	YDR404C	RRP4	P38792	359 aa	Known RBP	4.23	□□□□□ -1.73
RPB7	YDR404C	POP2	P39008	433 aa		4.23	□□□□□ -1.73
RPB7	YDR404C	PCI8	P40512	444 aa		4.23	□□□□□ -1.73
RPB7	YDR404C	EPL1	P43572	832 aa		4.23	□□□□□ -1.73
RPB7	YDR404C	FYV8	P46949	817 aa	Known RBP	4.23	□□□□□ -1.73
RPB7	YDR404C	PHO86	P46956	311 aa		4.23	□□□□□ -1.73
RPB7	YDR404C	PCP1	P53259	346 aa		4.23	□□□□□ -1.73
RPB7	YDR404C	RPL6A	Q02326	176 aa	Known RBP	4.23	□□□□□ -1.73
RPB7	YDR404C	RPN9	Q04062	393 aa	Known RBP	4.23	□□□□□ -1.73
RPB7	YDR404C	CSI1	Q04368	295 aa		4.23	□□□□□ -1.73
RPB7	YDR404C	MRPL51	Q06090	140 aa	Predicted RBP	4.23	□□□□□ -1.73
RPB7	YDR404C	MLH2	Q07980	695 aa		4.23	□□□□□ -1.73
RPB7	YDR404C	ALG1	P16661	449 aa		4.22	□□□□□ -1.73
RPB7	YDR404C	EXO70	P19658	623 aa		4.22	□□□□□ -1.73
RPB7	YDR404C	RPS0A	P32905	252 aa	Known RBP	4.22	□□□□□ -1.73
RPB7	YDR404C	MRPL4	P36517	319 aa		4.22	□□□□□ -1.73
RPB7	YDR404C	ISC1	P40015	477 aa	Known RBP	4.22	□□□□□ -1.73
RPB7	YDR404C	IRC15	Q02733	499 aa		4.22	□□□□□ -1.73
RPB7	YDR404C	RLI1	Q03195	608 aa	Known RBP	4.22	□□□□□ -1.73
RPB7	YDR404C	YDR341C	Q05506	607 aa	Known RBP	4.22	□□□□□ -1.73
RPB7	YDR404C	DBP9	Q06218	594 aa	Known RBP	4.22	□□□□□ -1.73
RPB7	YDR404C	NDL1	Q06568	189 aa		4.22	□□□□□ -1.73
RPB7	YDR404C	YEH2	Q07950	538 aa		4.22	□□□□□ -1.73
RPB7	YDR404C	YDL009C	Q12210	107 aa		4.22	□□□□□ -1.73
RPB7	YDR404C	YDR061W	Q12298	539 aa		4.22	□□□□□ -1.73
RPB7	YDR404C	GLN3	P18494	730 aa		4.21	□□□□□ -1.74
RPB7	YDR404C	HNM1	P19807	563 aa		4.21	□□□□□ -1.74
RPB7	YDR404C	PRO3	P32263	286 aa	Known RBP	4.21	□□□□□ -1.74
RPB7	YDR404C	NIP1	P32497	812 aa	Known RBP	4.21	□□□□□ -1.74
RPB7	YDR404C	YNK1	P36010	153 aa	Known RBP	4.21	□□□□□ -1.74
RPB7	YDR404C	FRE2	P36033	711 aa		4.21	□□□□□ -1.74
RPB7	YDR404C	DRE2	P36152	348 aa		4.21	□□□□□ -1.74
RPB7	YDR404C	OLA1	P38219	394 aa	Known RBP	4.21	□□□□□ -1.74
RPB7	YDR404C	RFS1	P38234	210 aa	Known RBP	4.21	□□□□□ -1.74
RPB7	YDR404C	GDT1	P38301	280 aa	Predicted RBP	4.21	□□□□□ -1.74
RPB7	YDR404C	SLX1	P38324	304 aa		4.21	□□□□□ -1.74
RPB7	YDR404C	RRP3	P38712	501 aa	Known RBP	4.21	□□□□□ -1.74
RPB7	YDR404C	YIL152W	P40455	235 aa		4.21	□□□□□ -1.74
RPB7	YDR404C	NAS2	P40555	220 aa		4.21	□□□□□ -1.74
RPB7	YDR404C	YIR014W	P40570	242 aa		4.21	□□□□□ -1.74
RPB7	YDR404C	PIB2	P53191	635 aa		4.21	□□□□□ -1.74
RPB7	YDR404C	YMR034C	Q05131	434 aa	Predicted RBP	4.21	□□□□□ -1.74
RPB7	YDR404C	HCR1	Q05775	265 aa	Known RBP	4.21	□□□□□ -1.74
RPB7	YDR404C	DSE3	Q08729	430 aa		4.21	□□□□□ -1.74
RPB7	YDR404C	PSY3	Q12318	242 aa		4.21	□□□□□ -1.74
RPB7	YDR404C	PRP8	P33334	2413 aa	Known RBP	4.21	□□□□□ -1.74
RPB7	YDR404C	HIS4	P00815	799 aa	Known RBP	4.2	□□□□□ -1.74
RPB7	YDR404C	SIP2	P34164	415 aa	Known RBP	4.2	□□□□□ -1.74
RPB7	YDR404C	ASK1	P35734	292 aa		4.2	□□□□□ -1.74
RPB7	YDR404C	SPC97	P38863	823 aa		4.2	□□□□□ -1.74
RPB7	YDR404C	GPI16	P38875	610 aa		4.2	□□□□□ -1.74
RPB7	YDR404C	STN1	P38960	494 aa		4.2	□□□□□ -1.74
RPB7	YDR404C	GAT2	P40209	560 aa		4.2	□□□□□ -1.74
RPB7	YDR404C	CHS6	P40955	746 aa		4.2	□□□□□ -1.74
RPB7	YDR404C	MDE1	P47095	244 aa		4.2	□□□□□ -1.74
RPB7	YDR404C	ROG1	P53118	685 aa		4.2	□□□□□ -1.74
RPB7	YDR404C	GIP3	Q03016	1276 aa		4.2	□□□□□ -1.74
RPB7	YDR404C	DIG1	Q03063	452 aa	Known RBP	4.2	□□□□□ -1.74
RPB7	YDR404C	TAF12	Q03761	539 aa		4.2	□□□□□ -1.74
RPB7	YDR404C	VPS74	Q06385	345 aa		4.2	□□□□□ -1.74
RPB7	YDR404C	PML1	Q07930	204 aa	Predicted RBP	4.2	□□□□□ -1.74
RPB7	YDR404C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.2	□□□□□ -1.74
RPB7	YDR404C	CTR86	P25355	563 aa		4.19	□□□□□ -1.74
RPB7	YDR404C	YEL043W	P32618	956 aa		4.19	□□□□□ -1.74
RPB7	YDR404C	YCR041W	P37265	110 aa		4.19	□□□□□ -1.74
RPB7	YDR404C	YPS6	P40583	537 aa		4.19	□□□□□ -1.74
RPB7	YDR404C	YIP1	P53039	248 aa		4.19	□□□□□ -1.74
RPB7	YDR404C	YIP5	P53108	310 aa		4.19	□□□□□ -1.74
RPB7	YDR404C	SCW4	P53334	386 aa	Known RBP	4.19	□□□□□ -1.74
RPB7	YDR404C	YFH1	Q07540	174 aa		4.19	□□□□□ -1.74
RPB7	YDR404C	STF1	P01098	86 aa		4.18	□□□□□ -1.74
RPB7	YDR404C	ILV5	P06168	395 aa	Known RBP	4.18	□□□□□ -1.74
RPB7	YDR404C	YCR100C	P25606	316 aa		4.18	□□□□□ -1.74
RPB7	YDR404C	PHO91	P27514	894 aa		4.18	□□□□□ -1.74
RPB7	YDR404C	FAA1	P30624	700 aa	Known RBP	4.18	□□□□□ -1.74
RPB7	YDR404C	RSM22	P36056	628 aa		4.18	□□□□□ -1.74
RPB7	YDR404C	ARC40	P38328	384 aa	Known RBP	4.18	□□□□□ -1.74
RPB7	YDR404C	PCF11	P39081	626 aa	Predicted RBP	4.18	□□□□□ -1.74
RPB7	YDR404C	YAL037W	P39728	267 aa		4.18	□□□□□ -1.74
RPB7	YDR404C	MOB1	P40484	314 aa		4.18	□□□□□ -1.74
RPB7	YDR404C	ELP2	P42935	788 aa		4.18	□□□□□ -1.74
RPB7	YDR404C	GWT1	P47026	490 aa		4.18	□□□□□ -1.74
RPB7	YDR404C	HMS2	P47175	358 aa		4.18	□□□□□ -1.74
RPB7	YDR404C	YDR541C	Q03049	344 aa		4.18	□□□□□ -1.74
RPB7	YDR404C	SNT309	Q06091	175 aa	Predicted RBP	4.18	□□□□□ -1.74
RPB7	YDR404C	GEP3	Q08622	556 aa		4.18	□□□□□ -1.74
RPB7	YDR404C	REX3	Q12090	404 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 24 ms