RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C SRP72P38688 640 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C GRE3P38715 327 aaKnown RBP RIP-Chip data1.04□□□□□ -2.24not detected
VAM6YDL077C YHL008CP38750 627 aa1.04□□□□□ -2.24
VAM6YDL077C YHK8P38776 514 aa1.04□□□□□ -2.24
VAM6YDL077C SMF2P38778 549 aa1.04□□□□□ -2.24
VAM6YDL077C CYC2P38909 366 aa1.04□□□□□ -2.24
VAM6YDL077C STN1P38960 494 aa1.04□□□□□ -2.24
VAM6YDL077C END3P39013 349 aa1.04□□□□□ -2.24
VAM6YDL077C PAC2P39937 518 aa1.04□□□□□ -2.24
VAM6YDL077C VAB2P40003 282 aa1.04□□□□□ -2.24
VAM6YDL077C ALG8P40351 577 aa1.04□□□□□ -2.24
VAM6YDL077C ARG2P40360 574 aa1.04□□□□□ -2.24
VAM6YDL077C YIL166CP40445 542 aa1.04□□□□□ -2.24
VAM6YDL077C RPL10P41805 221 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C GLR1P41921 483 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C AIM23P47015 356 aa1.04□□□□□ -2.24
VAM6YDL077C ACF4P47129 309 aa1.04□□□□□ -2.24
VAM6YDL077C MTR3P48240 250 aaPredicted RBP1.04□□□□□ -2.24
VAM6YDL077C RAI1P53063 387 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C YNR068CP53754 272 aa1.04□□□□□ -2.24
VAM6YDL077C MRPL22P53881 309 aa1.04□□□□□ -2.24
VAM6YDL077C MAP1Q01662 387 aaKnown RBP RIP-Chip data1.04□□□□□ -2.24not detected
VAM6YDL077C NGL2Q03264 515 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C RSN1Q03516 953 aa1.04□□□□□ -2.24
VAM6YDL077C MUS81Q04149 632 aaPredicted RBP1.04□□□□□ -2.24
VAM6YDL077C COA4Q05809 96 aa1.04□□□□□ -2.24
VAM6YDL077C ECM7Q06200 448 aa1.04□□□□□ -2.24
VAM6YDL077C YLR446WQ06204 433 aa1.04□□□□□ -2.24
VAM6YDL077C SMD2Q06217 110 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C FRQ1Q06389 190 aa1.04□□□□□ -2.24
VAM6YDL077C MHR1Q06630 226 aa1.04□□□□□ -2.24
VAM6YDL077C MRL1Q06815 381 aa1.04□□□□□ -2.24
VAM6YDL077C SSK1Q07084 712 aa1.04□□□□□ -2.24
VAM6YDL077C FRE3Q08905 711 aa1.04□□□□□ -2.24
VAM6YDL077C THP3Q12049 470 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C ATX2Q12067 313 aa1.04□□□□□ -2.24
VAM6YDL077C SPC3Q12133 184 aa1.04□□□□□ -2.24
VAM6YDL077C YOR342CQ12182 319 aa1.04□□□□□ -2.24
VAM6YDL077C LCB4Q12246 624 aa1.04□□□□□ -2.24
VAM6YDL077C PAA1Q12447 191 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C RMD5Q12508 421 aa1.04□□□□□ -2.24
VAM6YDL077C PTC5Q12511 572 aa1.04□□□□□ -2.24
VAM6YDL077C YPL119C-AQ3E751 87 aa1.04□□□□□ -2.24
VAM6YDL077C ISN1Q99312 450 aa1.04□□□□□ -2.24
VAM6YDL077C MYO1P08964 1928 aa1.04□□□□□ -2.24
VAM6YDL077C CYC1P00044 109 aaPredicted RBP1.04□□□□□ -2.24
VAM6YDL077C QCR2P07257 368 aa1.04□□□□□ -2.24
VAM6YDL077C HTS1P07263 546 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C GCY1P14065 312 aaKnown RBP RIP-Chip data1.04□□□□□ -2.24not detected
VAM6YDL077C SEC59P20048 519 aa1.04□□□□□ -2.24
VAM6YDL077C HOP1P20050 605 aa1.04□□□□□ -2.24
VAM6YDL077C PRP2P20095 876 aaPredicted RBP1.04□□□□□ -2.24
VAM6YDL077C SIR1P21691 654 aa1.04□□□□□ -2.24
VAM6YDL077C AIM17P23180 465 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C RRT12P25381 491 aa1.04□□□□□ -2.24
VAM6YDL077C ARO7P32178 256 aa1.04□□□□□ -2.24
VAM6YDL077C RPD3P32561 433 aa1.04□□□□□ -2.24
VAM6YDL077C SCM4P32564 187 aa1.04□□□□□ -2.24
VAM6YDL077C PIN4P34217 668 aaKnown RBP RIP-Chip data1.04□□□□□ -2.24not detected
VAM6YDL077C YKL102CP34249 101 aa1.04□□□□□ -2.24
VAM6YDL077C YUH1P35127 236 aa1.04□□□□□ -2.24
VAM6YDL077C DHR2P36009 735 aaPredicted RBP1.04□□□□□ -2.24
VAM6YDL077C YKL023WP36103 277 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C YBR139WP38109 508 aa1.04□□□□□ -2.24
VAM6YDL077C MCM7P38132 845 aa1.04□□□□□ -2.24
VAM6YDL077C YBR284WP38150 797 aa1.04□□□□□ -2.24
VAM6YDL077C ECM2P38241 364 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C YBR137WP38276 179 aa1.04□□□□□ -2.24
VAM6YDL077C GND1P38720 489 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C ARN2P38724 620 aa1.04□□□□□ -2.24
VAM6YDL077C YHR078WP38799 552 aa1.04□□□□□ -2.24
VAM6YDL077C BZZ1P38822 633 aa1.04□□□□□ -2.24
VAM6YDL077C NDT80P38830 627 aa1.04□□□□□ -2.24
VAM6YDL077C PFS1P38872 237 aa1.04□□□□□ -2.24
VAM6YDL077C AIM46P38885 310 aa1.04□□□□□ -2.24
VAM6YDL077C HSP10P38910 106 aa1.04□□□□□ -2.24
VAM6YDL077C MLH1P38920 769 aa1.04□□□□□ -2.24
VAM6YDL077C FAA3P39002 694 aa1.04□□□□□ -2.24
VAM6YDL077C STT3P39007 718 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C FLC2P39719 783 aa1.04□□□□□ -2.24
VAM6YDL077C YEL025CP39991 1188 aa1.04□□□□□ -2.24
VAM6YDL077C HEM14P40012 539 aa1.04□□□□□ -2.24
VAM6YDL077C PCL6P40038 420 aa1.04□□□□□ -2.24
VAM6YDL077C YMR134WP40207 237 aa1.04□□□□□ -2.24
VAM6YDL077C TOK1P40310 691 aa1.04□□□□□ -2.24
VAM6YDL077C PAU15P40585 124 aa1.04□□□□□ -2.24
VAM6YDL077C IMA5P40884 581 aa1.04□□□□□ -2.24
VAM6YDL077C CIN1P40987 1014 aa1.04□□□□□ -2.24
VAM6YDL077C MOB2P43563 287 aa1.04□□□□□ -2.24
VAM6YDL077C PHO86P46956 311 aa1.04□□□□□ -2.24
VAM6YDL077C YJL132WP47014 750 aa1.04□□□□□ -2.24
VAM6YDL077C IBA57P47158 497 aa1.04□□□□□ -2.24
VAM6YDL077C YJR141WP47172 347 aaPredicted RBP1.04□□□□□ -2.24
VAM6YDL077C YJR149WP47177 404 aa1.04□□□□□ -2.24
VAM6YDL077C GPG1P53130 126 aa1.04□□□□□ -2.24
VAM6YDL077C RIM8P53179 542 aa1.04□□□□□ -2.24
VAM6YDL077C YGR016WP53209 190 aa1.04□□□□□ -2.24
VAM6YDL077C DRN1P53255 507 aaKnown RBP1.04□□□□□ -2.24
VAM6YDL077C YGR127WP53275 312 aa1.04□□□□□ -2.24
VAM6YDL077C YGR168CP53293 376 aa1.04□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms