RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 CHK1P38147 527 aa2.04□□□□□ -2.08
snR54snR54 RRP4P38792 359 aaKnown RBP2.04□□□□□ -2.08
snR54snR54 OXA1P39952 402 aa2.04□□□□□ -2.08
snR54snR54 SIM1P40472 476 aa2.04□□□□□ -2.08
snR54snR54 EGT2P42835 1041 aa2.04□□□□□ -2.08
snR54snR54 PGU1P47180 361 aa2.04□□□□□ -2.08
snR54snR54 BNS1P50084 137 aa2.04□□□□□ -2.08
snR54snR54 MRPS16Q02608 121 aa2.04□□□□□ -2.08
snR54snR54 VHS1Q03785 461 aa2.04□□□□□ -2.08
snR54snR54 RRP45Q05636 305 aaKnown RBP2.04□□□□□ -2.08
snR54snR54 RKM1Q08961 583 aaPredicted RBP2.04□□□□□ -2.08
snR54snR54 SCEIP03882 235 aa2.03□□□□□ -2.08
snR54snR54 MSI1P13712 422 aa2.03□□□□□ -2.08
snR54snR54 YCL068CP25593 260 aa2.03□□□□□ -2.08
snR54snR54 MRM2P53123 320 aa2.03□□□□□ -2.08
snR54snR54 MRPL19P53875 158 aa2.03□□□□□ -2.08
snR54snR54 TAF12Q03761 539 aa2.03□□□□□ -2.08
snR54snR54 ARX1Q03862 593 aaKnown RBP2.03□□□□□ -2.08
snR54snR54 NDE2Q07500 545 aa2.03□□□□□ -2.08
snR54snR54 RAX1Q08760 435 aa2.03□□□□□ -2.08
snR54snR54 YPQ1Q12010 308 aa2.03□□□□□ -2.08
snR54snR54 COX4P04037 155 aa2.02□□□□□ -2.09
snR54snR54 IMA3P0CW40 589 aa2.02□□□□□ -2.09
snR54snR54 IMA4P0CW41 589 aa2.02□□□□□ -2.09
snR54snR54 PHA2P32452 334 aa2.02□□□□□ -2.09
snR54snR54 YFR057WP43625 151 aa2.02□□□□□ -2.09
snR54snR54 LCB3P47013 409 aa2.02□□□□□ -2.09
snR54snR54 COS5P47187 383 aa2.02□□□□□ -2.09
snR54snR54 CRH1P53301 507 aa2.02□□□□□ -2.09
snR54snR54 CCE1Q03702 353 aa2.02□□□□□ -2.09
snR54snR54 YET2Q04210 160 aa2.02□□□□□ -2.09
snR54snR54 RTN1Q04947 295 aaKnown RBP2.02□□□□□ -2.09
snR54snR54 COS7Q07788 383 aa2.02□□□□□ -2.09
snR54snR54 IMA2Q08295 589 aa2.02□□□□□ -2.09
snR54snR54 DNL4Q08387 944 aaPredicted RBP2.02□□□□□ -2.09
snR54snR54 IES4Q08561 116 aa2.02□□□□□ -2.09
snR54snR54 YGK3Q12222 375 aaPredicted RBP2.02□□□□□ -2.09
snR54snR54 HSP42Q12329 375 aa2.02□□□□□ -2.09
snR54snR54 SNU66Q12420 587 aaPredicted RBP2.02□□□□□ -2.09
snR54snR54 CLB3P24870 427 aa2.01□□□□□ -2.09
snR54snR54 ERG3P32353 365 aa2.01□□□□□ -2.09
snR54snR54 YBR056WP38081 501 aa2.01□□□□□ -2.09
snR54snR54 MRPS9P38120 278 aa2.01□□□□□ -2.09
snR54snR54 RRN10P38204 145 aa2.01□□□□□ -2.09
snR54snR54 NTC20P38302 140 aaPredicted RBP2.01□□□□□ -2.09
snR54snR54 COX14P39103 70 aa2.01□□□□□ -2.09
snR54snR54 TIM17P39515 158 aa2.01□□□□□ -2.09
snR54snR54 ATG18P43601 500 aa2.01□□□□□ -2.09
snR54snR54 YGL138CP53122 345 aa2.01□□□□□ -2.09
snR54snR54 YGR018CP53211 109 aa2.01□□□□□ -2.09
snR54snR54 ECM11Q04110 302 aa2.01□□□□□ -2.09
snR54snR54 TAF11Q04226 346 aa2.01□□□□□ -2.09
snR54snR54 SNT309Q06091 175 aaPredicted RBP2.01□□□□□ -2.09
snR54snR54 DIS3Q08162 1001 aaKnown RBP2.01□□□□□ -2.09
snR54snR54 TPT1Q12272 230 aaKnown RBP2.01□□□□□ -2.09
snR54snR54 PGA3Q12746 312 aaKnown RBP2.01□□□□□ -2.09
snR54snR54 TY1B-AO13527 1196 aaKnown RBP2□□□□□ -2.09
snR54snR54 ADH1P00330 348 aaKnown RBP2□□□□□ -2.09
snR54snR54 RED1P14291 827 aa2□□□□□ -2.09
snR54snR54 SRV2P17555 526 aaKnown RBP2□□□□□ -2.09
snR54snR54 DPH5P32469 300 aaPredicted RBP2□□□□□ -2.09
snR54snR54 YME2P32843 850 aa2□□□□□ -2.09
snR54snR54 YKL097CP34245 136 aa2□□□□□ -2.09
snR54snR54 RRP1P35178 278 aaPredicted RBP2□□□□□ -2.09
snR54snR54 PTI1P39927 425 aaPredicted RBP2□□□□□ -2.09
snR54snR54 NDE1P40215 560 aa2□□□□□ -2.09
snR54snR54 MST27P53176 234 aa2□□□□□ -2.09
snR54snR54 MKC7P53379 596 aa2□□□□□ -2.09
snR54snR54 MDM36Q06820 579 aa2□□□□□ -2.09
snR54snR54 MFG1Q07684 458 aa2□□□□□ -2.09
snR54snR54 RPB5P20434 215 aa1.99□□□□□ -2.09
snR54snR54 PRR1P28708 518 aa1.99□□□□□ -2.09
snR54snR54 YHK8P38776 514 aa1.99□□□□□ -2.09
snR54snR54 OCA2P53949 197 aa1.99□□□□□ -2.09
snR54snR54 TDA1Q03533 586 aa1.99□□□□□ -2.09
snR54snR54 CMS1Q07897 291 aaKnown RBP1.99□□□□□ -2.09
snR54snR54 ATG34Q12292 412 aa1.99□□□□□ -2.09
snR54snR54 ISN1Q99312 450 aa1.99□□□□□ -2.09
snR54snR54 YRF1-4O13559 1382 aa1.98□□□□□ -2.09
snR54snR54 CAP2P13517 287 aa1.98□□□□□ -2.09
snR54snR54 CDC50P25656 391 aa1.98□□□□□ -2.09
snR54snR54 OM14P38325 134 aa1.98□□□□□ -2.09
snR54snR54 CHS6P40955 746 aa1.98□□□□□ -2.09
snR54snR54 GPD2P41911 440 aaKnown RBP1.98□□□□□ -2.09
snR54snR54 YPS5P53057 165 aa1.98□□□□□ -2.09
snR54snR54 URH1Q04179 340 aa1.98□□□□□ -2.09
snR54snR54 COG4Q06096 861 aa1.98□□□□□ -2.09
snR54snR54 PRB1P09232 635 aa1.97□□□□□ -2.09
snR54snR54 HOM3P10869 527 aa1.97□□□□□ -2.09
snR54snR54 CLC1P17891 233 aa1.97□□□□□ -2.09
snR54snR54 URA4P20051 364 aa1.97□□□□□ -2.09
snR54snR54 EXG1P23776 448 aaKnown RBP1.97□□□□□ -2.09
snR54snR54 TFB1P32776 642 aa1.97□□□□□ -2.09
snR54snR54 ANR2P36090 516 aaPredicted RBP1.97□□□□□ -2.09
snR54snR54 MMS4P38257 691 aa1.97□□□□□ -2.09
snR54snR54 ALD5P40047 520 aaKnown RBP1.97□□□□□ -2.09
snR54snR54 HAC1P41546 238 aa1.97□□□□□ -2.09
snR54snR54 AIM24P47127 394 aa1.97□□□□□ -2.09
snR54snR54 COS1P53822 381 aa1.97□□□□□ -2.09
snR54snR54 SKO1Q02100 647 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms