RNA–Protein interactions for RNA: YPR184W

GDB1, Transcript of Glycogen debranching enzyme, yeast

Gene GDB1, Length 4,611 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDB1	YPR184W	NSG2	P53898	299 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	ARP4	P80428	489 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	YSA1	Q01976	231 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	YLR456W	Q06199	204 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	FLC1	Q08967	793 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	SRL2	Q12020	392 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	YBR085C-A	O43137	85 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	RHO1	P06780	209 aa	Known RBP	4.85	□□□□□ -1.63
GDB1	YPR184W	PRP2	P20095	876 aa	Predicted RBP	4.85	□□□□□ -1.63
GDB1	YPR184W	UBC8	P28263	218 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	CYS4	P32582	507 aa	Known RBP	4.85	□□□□□ -1.63
GDB1	YPR184W	MRT4	P33201	236 aa	Known RBP	4.85	□□□□□ -1.63
GDB1	YPR184W	MOT2	P34909	587 aa	Known RBP	4.85	□□□□□ -1.63
GDB1	YPR184W	MRP8	P35719	219 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	PEX18	P38855	283 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	UTP7	P40055	554 aa	Known RBP	4.85	□□□□□ -1.63
GDB1	YPR184W	SLZ1	P40167	298 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	AYR1	P40471	297 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	PHB1	P40961	287 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	YNL320W	P42840	284 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	PHO86	P46956	311 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	SNP1	Q00916	300 aa	Predicted RBP	4.85	□□□□□ -1.63
GDB1	YPR184W	SWP1	Q02795	286 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	PLP1	Q04004	230 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	RRG8	Q06109	277 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	YOR338W	Q99326	363 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	NUP1	P20676	1076 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	CMK2	P22517	447 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	DOT6	P40059	670 aa	Known RBP	4.85	□□□□□ -1.63
GDB1	YPR184W	RAD17	P48581	401 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	PKP2	P53170	491 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	MTQ2	Q03920	221 aa	Predicted RBP	4.85	□□□□□ -1.63
GDB1	YPR184W	YHC1	Q05900	231 aa	Known RBP	4.85	□□□□□ -1.63
GDB1	YPR184W	DCR2	Q05924	578 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	APC2	Q12440	853 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	TEF1	P02994	458 aa	Known RBP	4.85	□□□□□ -1.63
GDB1	YPR184W	BI2	P03873	423 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	YHR214C-D	P0CX93	97 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	DIT1	P21623	536 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	MED8	P38304	223 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	LTP1	P40347	161 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	TIR3	P40552	269 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	GPI8	P49018	411 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	PHB2	P50085	310 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	BAG7	Q12128	409 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	VAM3	Q12241	283 aa		4.85	□□□□□ -1.63
GDB1	YPR184W	AMD1	P15274	810 aa	Known RBP	4.84	□□□□□ -1.63
GDB1	YPR184W	SEF1	P34228	1148 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	RCK1	P38622	512 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	MLH1	P38920	769 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	LYS1	P38998	373 aa	RIP-Chip data	4.84	□□□□□ -1.63	not detected
GDB1	YPR184W	ZRG8	P40021	1076 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	MNT3	P40549	630 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	AIF1	P52923	378 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	GND2	P53319	492 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	PRM1	P53835	661 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	YOL159C	Q08300	171 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	DCI1	Q08558	271 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	RDI1	Q12434	202 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	URA4	P20051	364 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	HXT1	P32465	570 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	PDB1	P32473	366 aa	Known RBP	4.84	□□□□□ -1.63
GDB1	YPR184W	YOR062C	P36025	268 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	ARP1	P38696	384 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	YER121W	P40076	114 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	BUD17	P53727	317 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	SAM50	P53969	484 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	SKO1	Q02100	647 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	YKR011C	Q02209	353 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	NUP100	Q02629	959 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	VPS36	Q06696	566 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	IRC25	Q07951	179 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	CYT1	P07143	309 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	CAF4	P36130	643 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	DTR1	P38125	572 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	PRE3	P38624	215 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	ARN1	P38731	627 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	YHR210C	P38893	341 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	SER33	P40510	469 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	YIP1	P53039	248 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	PUS2	P53167	370 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	MKC7	P53379	596 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	YNL011C	P53980	444 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	SUR7	P54003	302 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	RSM23	Q01163	450 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	CTF19	Q02732	369 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	YMR034C	Q05131	434 aa	Predicted RBP	4.84	□□□□□ -1.63
GDB1	YPR184W	NBA1	Q08229	501 aa	Known RBP	4.84	□□□□□ -1.63
GDB1	YPR184W	MCH5	Q08777	521 aa		4.84	□□□□□ -1.63
GDB1	YPR184W	RPB5	P20434	215 aa		4.84	□□□□□ -1.64
GDB1	YPR184W	YCK2	P23292	546 aa	Known RBP	4.84	□□□□□ -1.64
GDB1	YPR184W	AHC2	P25649	128 aa		4.84	□□□□□ -1.64
GDB1	YPR184W	TMA19	P35691	167 aa	Known RBP	4.84	□□□□□ -1.64
GDB1	YPR184W	CCZ1	P38273	704 aa		4.84	□□□□□ -1.64
GDB1	YPR184W	SET5	P38890	526 aa	Known RBP	4.84	□□□□□ -1.64
GDB1	YPR184W	CHL4	P38907	458 aa		4.84	□□□□□ -1.64
GDB1	YPR184W	SHO1	P40073	367 aa		4.84	□□□□□ -1.64
GDB1	YPR184W	ARK1	P53974	638 aa		4.84	□□□□□ -1.64
GDB1	YPR184W	YNL018C	P53976	612 aa		4.84	□□□□□ -1.64
GDB1	YPR184W	YPD1	Q07688	167 aa		4.84	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms