RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	HOG1	P32485	435 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	PRS2	P38620	318 aa	Known RBP	3.86	□□□□□ -1.79
ATG2	YNL242W	FHL1	P39521	936 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	YEL028W	P39989	153 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	FMC1	P40491	155 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	MEP2	P41948	499 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	YJR030C	P47101	745 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	PUS4	P48567	403 aa	Known RBP	3.86	□□□□□ -1.79
ATG2	YNL242W	APM1	Q00776	475 aa	Predicted RBP	3.86	□□□□□ -1.79
ATG2	YNL242W	SRP1	Q02821	542 aa	Known RBP	3.86	□□□□□ -1.79
ATG2	YNL242W	MET31	Q03081	177 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	YMR178W	Q03219	274 aa	Known RBP	3.86	□□□□□ -1.79
ATG2	YNL242W	YLR224W	Q05947	369 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	DUS3	Q06053	668 aa	Known RBP	3.86	□□□□□ -1.79
ATG2	YNL242W	YLR345W	Q06137	509 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	MRI1	Q06489	411 aa	Known RBP	3.86	□□□□□ -1.79
ATG2	YNL242W	FMP40	Q08968	688 aa	Predicted RBP	3.86	□□□□□ -1.79
ATG2	YNL242W	YOR289W	Q12012	251 aa	Predicted RBP	3.86	□□□□□ -1.79
ATG2	YNL242W	ALG7	P07286	448 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	TRM1	P15565	570 aa	Known RBP	3.86	□□□□□ -1.79
ATG2	YNL242W	FUR1	P18562	216 aa	Known RBP	3.86	□□□□□ -1.79
ATG2	YNL242W	IDP1	P21954	428 aa	Known RBP	3.86	□□□□□ -1.79
ATG2	YNL242W	MNE1	P24720	663 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	FUN26	P31381	517 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	SIP1	P32578	815 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	LHP1	P33399	275 aa	Known RBP	3.86	□□□□□ -1.79
ATG2	YNL242W	CPR5	P35176	225 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	MRPL3	P36516	390 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	DHH1	P39517	506 aa	Known RBP	3.86	□□□□□ -1.79
ATG2	YNL242W	FMP52	P40008	231 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	HXT9	P40885	567 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	ATG18	P43601	500 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	RPS10B	P46784	105 aa	Known RBP	3.86	□□□□□ -1.79
ATG2	YNL242W	GCV1	P48015	400 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	SCY1	P53009	804 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	PRM8	P53174	237 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	YPR003C	P53394	754 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	SVL3	Q03088	825 aa	Known RBP	3.86	□□□□□ -1.79
ATG2	YNL242W	YDR249C	Q03787	373 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	OPI10	Q08202	246 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	RPS10A	Q08745	105 aa	Predicted RBP	3.86	□□□□□ -1.79
ATG2	YNL242W	TRM8	Q12009	286 aa		3.86	□□□□□ -1.79
ATG2	YNL242W	AI4	P03878	556 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	PEP4	P07267	405 aa	Known RBP	3.85	□□□□□ -1.79
ATG2	YNL242W	SST2	P11972	698 aa	Known RBP	3.85	□□□□□ -1.79
ATG2	YNL242W	SAM35	P14693	329 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	VPS17	P32913	551 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	SBE22	P38814	852 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	AFG3	P39925	761 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	HAT2	P39984	401 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	MTR3	P48240	250 aa	Predicted RBP	3.85	□□□□□ -1.79
ATG2	YNL242W	SPT20	P50875	604 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	EFR3	Q03653	782 aa	Known RBP	3.85	□□□□□ -1.79
ATG2	YNL242W	ARA2	Q04212	335 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	RNH1	Q04740	348 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	TYW1	Q08960	810 aa	Known RBP	3.85	□□□□□ -1.79
ATG2	YNL242W	CHL1	P22516	861 aa	Predicted RBP	3.85	□□□□□ -1.79
ATG2	YNL242W	THI4	P32318	326 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	LST4	P34239	828 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	ZRT3	P34240	503 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	ALG3	P38179	458 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	CCZ1	P38273	704 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	IMD2	P38697	523 aa	Known RBP	3.85	□□□□□ -1.79
ATG2	YNL242W	RPS20	P38701	121 aa	Known RBP	3.85	□□□□□ -1.79
ATG2	YNL242W	AIM18	P38884	321 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	SOP4	P39543	234 aa	Predicted RBP	3.85	□□□□□ -1.79
ATG2	YNL242W	COA1	P40452	197 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	RET2	P43621	546 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	ZAP1	P47043	880 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	MOG1	P47123	218 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	RUB1	Q03919	77 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	YMR034C	Q05131	434 aa	Predicted RBP	3.85	□□□□□ -1.79
ATG2	YNL242W	SWC7	Q06707	132 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	ATP14	Q12349	124 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	RPS1B	P23248	255 aa	Known RBP	3.85	□□□□□ -1.79
ATG2	YNL242W	EMC1	P25574	760 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	RPS1A	P33442	255 aa	Known RBP	3.85	□□□□□ -1.79
ATG2	YNL242W	UBX7	P38349	436 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	ARP1	P38696	384 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	MDM31	P38880	579 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	ERG10	P41338	398 aa	Known RBP	3.85	□□□□□ -1.79
ATG2	YNL242W	DIA3	P52290	468 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	BOL2	P53082	120 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	YGR168C	P53293	376 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	TIM44	Q01852	431 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	RSF1	Q05043	376 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	YLR283W	Q05867	314 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	ARV1	Q06541	321 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	YOL131W	Q08270	108 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.85	□□□□□ -1.79	not detected
ATG2	YNL242W	GUP2	Q08929	609 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	NUS1	Q12063	375 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	DCN1	Q12395	269 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	GIS3	Q12418	502 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	TMA7	Q3E764	64 aa	Known RBP	3.85	□□□□□ -1.79
ATG2	YNL242W	RIB3	Q99258	208 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	CDC4	P07834	779 aa		3.85	□□□□□ -1.79
ATG2	YNL242W	RPS18A	P0CX55	146 aa	Known RBP	3.85	□□□□□ -1.79
ATG2	YNL242W	RPS18B	P0CX56	146 aa	Predicted RBP	3.85	□□□□□ -1.79
ATG2	YNL242W	CDC23	P16522	626 aa		3.85	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 282.4 ms