RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeast

Gene VPS71, Length 843 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS71	YML041C	DSE3	Q08729	430 aa		4.19	□□□□□ -1.74
VPS71	YML041C	RRP36	Q12481	300 aa	Predicted RBP	4.19	□□□□□ -1.74
VPS71	YML041C	RAD61	Q99359	647 aa		4.19	□□□□□ -1.74
VPS71	YML041C	CDC37	P06101	506 aa	Known RBP	4.18	□□□□□ -1.74
VPS71	YML041C	STE3	P06783	470 aa		4.18	□□□□□ -1.74
VPS71	YML041C	CDC21	P06785	304 aa		4.18	□□□□□ -1.74
VPS71	YML041C	THR4	P16120	514 aa	Known RBP	4.18	□□□□□ -1.74
VPS71	YML041C	RAD57	P25301	460 aa		4.18	□□□□□ -1.74
VPS71	YML041C	ITR1	P30605	584 aa		4.18	□□□□□ -1.74
VPS71	YML041C	YNK1	P36010	153 aa	Known RBP	4.18	□□□□□ -1.74
VPS71	YML041C	INM1	P38710	295 aa		4.18	□□□□□ -1.74
VPS71	YML041C	YHR131C	P38835	850 aa		4.18	□□□□□ -1.74
VPS71	YML041C	SSO2	P39926	295 aa		4.18	□□□□□ -1.74
VPS71	YML041C	DIM1	P41819	318 aa	Known RBP	4.18	□□□□□ -1.74
VPS71	YML041C	RRT5	P43607	289 aa		4.18	□□□□□ -1.74
VPS71	YML041C	GWT1	P47026	490 aa		4.18	□□□□□ -1.74
VPS71	YML041C	RRP46	P53256	223 aa	Predicted RBP	4.18	□□□□□ -1.74
VPS71	YML041C	PCP1	P53259	346 aa		4.18	□□□□□ -1.74
VPS71	YML041C	GPI15	P53961	229 aa		4.18	□□□□□ -1.74
VPS71	YML041C	GIP3	Q03016	1276 aa		4.18	□□□□□ -1.74
VPS71	YML041C	DIG1	Q03063	452 aa	Known RBP	4.18	□□□□□ -1.74
VPS71	YML041C	VPS20	Q04272	221 aa		4.18	□□□□□ -1.74
VPS71	YML041C	SMA2	Q04658	369 aa		4.18	□□□□□ -1.74
VPS71	YML041C	YLR281C	Q05863	155 aa		4.18	□□□□□ -1.74
VPS71	YML041C	SRL1	Q08673	210 aa		4.18	□□□□□ -1.74
VPS71	YML041C	YLL056C	Q12177	298 aa		4.18	□□□□□ -1.74
VPS71	YML041C	ATG34	Q12292	412 aa		4.18	□□□□□ -1.74
VPS71	YML041C	CHS1	P08004	1131 aa		4.17	□□□□□ -1.74
VPS71	YML041C	PUT4	P15380	627 aa		4.17	□□□□□ -1.74
VPS71	YML041C	DBP3	P20447	523 aa	Known RBP	4.17	□□□□□ -1.74
VPS71	YML041C	YCR100C	P25606	316 aa		4.17	□□□□□ -1.74
VPS71	YML041C	LOS1	P33418	1100 aa	Predicted RBP	4.17	□□□□□ -1.74
VPS71	YML041C	FRE2	P36033	711 aa		4.17	□□□□□ -1.74
VPS71	YML041C	YCR041W	P37265	110 aa		4.17	□□□□□ -1.74
VPS71	YML041C	QDR3	P38227	689 aa		4.17	□□□□□ -1.74
VPS71	YML041C	TIF5	P38431	405 aa	Known RBP	4.17	□□□□□ -1.74
VPS71	YML041C	RRP3	P38712	501 aa	Known RBP	4.17	□□□□□ -1.74
VPS71	YML041C	YHR218W	P38899	603 aa		4.17	□□□□□ -1.74
VPS71	YML041C	LYS1	P38998	373 aa	RIP-Chip data	4.17	□□□□□ -1.74	not detected
VPS71	YML041C	RTT102	P53330	157 aa		4.17	□□□□□ -1.74
VPS71	YML041C	SCW4	P53334	386 aa	Known RBP	4.17	□□□□□ -1.74
VPS71	YML041C	ODC1	Q03028	310 aa		4.17	□□□□□ -1.74
VPS71	YML041C	MSC3	Q05812	728 aa		4.17	□□□□□ -1.74
VPS71	YML041C	SGT1	Q08446	395 aa		4.17	□□□□□ -1.74
VPS71	YML041C	CSR2	Q12734	1121 aa		4.17	□□□□□ -1.74
VPS71	YML041C	RNR2	P09938	399 aa	Known RBP	4.16	□□□□□ -1.74
VPS71	YML041C	NFT1	P0CE68	1218 aa		4.16	□□□□□ -1.74
VPS71	YML041C	GLC7	P32598	312 aa	Known RBP	4.16	□□□□□ -1.74
VPS71	YML041C	PPQ1	P32945	549 aa		4.16	□□□□□ -1.74
VPS71	YML041C	RSM22	P36056	628 aa		4.16	□□□□□ -1.74
VPS71	YML041C	RIM2	P38127	377 aa		4.16	□□□□□ -1.74
VPS71	YML041C	MET30	P39014	640 aa		4.16	□□□□□ -1.74
VPS71	YML041C	DHH1	P39517	506 aa	Known RBP	4.16	□□□□□ -1.74
VPS71	YML041C	YLH47	Q06493	454 aa		4.16	□□□□□ -1.74
VPS71	YML041C	RNH203	Q12338	110 aa		4.16	□□□□□ -1.74
VPS71	YML041C	DST1	P07273	309 aa		4.15	□□□□□ -1.75
VPS71	YML041C	IMA3	P0CW40	589 aa		4.15	□□□□□ -1.75
VPS71	YML041C	IMA4	P0CW41	589 aa		4.15	□□□□□ -1.75
VPS71	YML041C	RNA14	P25298	677 aa	Known RBP	4.15	□□□□□ -1.75
VPS71	YML041C	PSO2	P30620	661 aa		4.15	□□□□□ -1.75
VPS71	YML041C	HMX1	P32339	317 aa		4.15	□□□□□ -1.75
VPS71	YML041C	ATP3	P38077	311 aa	Known RBP	4.15	□□□□□ -1.75
VPS71	YML041C	RTT107	P38850	1070 aa		4.15	□□□□□ -1.75
VPS71	YML041C	LIN1	P38852	340 aa	Predicted RBP	4.15	□□□□□ -1.75
VPS71	YML041C	MNN9	P39107	395 aa	Known RBP	4.15	□□□□□ -1.75
VPS71	YML041C	IKS1	P47042	667 aa		4.15	□□□□□ -1.75
VPS71	YML041C	YNR048W	P53740	393 aa		4.15	□□□□□ -1.75
VPS71	YML041C	MMT1	Q03218	510 aa		4.15	□□□□□ -1.75
VPS71	YML041C	YMR310C	Q04867	317 aa	Predicted RBP	4.15	□□□□□ -1.75
VPS71	YML041C	FMP42	Q04991	504 aa		4.15	□□□□□ -1.75
VPS71	YML041C	ERP1	Q05359	219 aa	Known RBP	4.15	□□□□□ -1.75
VPS71	YML041C	IMA2	Q08295	589 aa		4.15	□□□□□ -1.75
VPS71	YML041C	PEX27	Q08580	376 aa		4.15	□□□□□ -1.75
VPS71	YML041C	GAL7	P08431	366 aa		4.14	□□□□□ -1.75
VPS71	YML041C	SPO12	P17123	173 aa		4.14	□□□□□ -1.75
VPS71	YML041C	SAG1	P20840	650 aa		4.14	□□□□□ -1.75
VPS71	YML041C	SLM5	P25345	492 aa	Known RBP	4.14	□□□□□ -1.75
VPS71	YML041C	LSB5	P25369	354 aa		4.14	□□□□□ -1.75
VPS71	YML041C	ATS1	P31386	333 aa		4.14	□□□□□ -1.75
VPS71	YML041C	YSC83	P32792	385 aa		4.14	□□□□□ -1.75
VPS71	YML041C	SPT8	P38915	602 aa		4.14	□□□□□ -1.75
VPS71	YML041C	YER079W	P40052	210 aa	Known RBP	4.14	□□□□□ -1.75
VPS71	YML041C	YFR018C	P43599	363 aa		4.14	□□□□□ -1.75
VPS71	YML041C	HMS2	P47175	358 aa		4.14	□□□□□ -1.75
VPS71	YML041C	RPN14	P53196	417 aa		4.14	□□□□□ -1.75
VPS71	YML041C	FRE4	P53746	719 aa		4.14	□□□□□ -1.75
VPS71	YML041C	YPL068C	Q02749	293 aa		4.14	□□□□□ -1.75
VPS71	YML041C	NUP53	Q03790	475 aa		4.14	□□□□□ -1.75
VPS71	YML041C	SNA4	Q07549	140 aa		4.14	□□□□□ -1.75
VPS71	YML041C	SRL2	Q12020	392 aa		4.14	□□□□□ -1.75
VPS71	YML041C	YPR022C	Q12139	1133 aa		4.14	□□□□□ -1.75
VPS71	YML041C	RPL15A	P05748	204 aa	Known RBP	4.13	□□□□□ -1.75
VPS71	YML041C	YAR066W	P0CX18	203 aa		4.13	□□□□□ -1.75
VPS71	YML041C	YHR214W	P0CX19	203 aa		4.13	□□□□□ -1.75
VPS71	YML041C	MAS1	P10507	462 aa		4.13	□□□□□ -1.75
VPS71	YML041C	TIP1	P27654	210 aa	Predicted RBP	4.13	□□□□□ -1.75
VPS71	YML041C	RGT1	P32862	1170 aa		4.13	□□□□□ -1.75
VPS71	YML041C	SPP381	P38282	291 aa	Predicted RBP	4.13	□□□□□ -1.75
VPS71	YML041C	SHO1	P40073	367 aa		4.13	□□□□□ -1.75
VPS71	YML041C	YIL169C	P40442	995 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms