RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C SPT10P35208 640 aa2.67□□□□□ -1.98
ATG38YLR211C RTC2P38279 296 aa2.67□□□□□ -1.98
ATG38YLR211C RRP4P38792 359 aaKnown RBP2.67□□□□□ -1.98
ATG38YLR211C COS5P47187 383 aa2.67□□□□□ -1.98
ATG38YLR211C BNS1P50084 137 aa2.67□□□□□ -1.98
ATG38YLR211C MTQ1P53944 314 aa2.67□□□□□ -1.98
ATG38YLR211C ADA2Q02336 434 aa2.67□□□□□ -1.98
ATG38YLR211C COS7Q07788 383 aa2.67□□□□□ -1.98
ATG38YLR211C MSI1P13712 422 aa2.66□□□□□ -1.98
ATG38YLR211C YME2P32843 850 aa2.66□□□□□ -1.98
ATG38YLR211C CHK1P38147 527 aa2.66□□□□□ -1.98
ATG38YLR211C YER186CP40101 306 aa2.66□□□□□ -1.98
ATG38YLR211C NDE1P40215 560 aa2.66□□□□□ -1.98
ATG38YLR211C SIM1P40472 476 aa2.66□□□□□ -1.98
ATG38YLR211C RRP45Q05636 305 aaKnown RBP2.66□□□□□ -1.98
ATG38YLR211C SMF3Q12078 473 aaPredicted RBP2.66□□□□□ -1.98
ATG38YLR211C SEO1P39709 593 aa2.65□□□□□ -1.99
ATG38YLR211C DFG10P40526 253 aa2.65□□□□□ -1.99
ATG38YLR211C YIL029CP40538 142 aa2.65□□□□□ -1.99
ATG38YLR211C RIF2Q06208 395 aa2.65□□□□□ -1.99
ATG38YLR211C RAX1Q08760 435 aa2.65□□□□□ -1.99
ATG38YLR211C HSP42Q12329 375 aa2.65□□□□□ -1.99
ATG38YLR211C JID1Q12350 301 aa2.65□□□□□ -1.99
ATG38YLR211C SNU66Q12420 587 aaPredicted RBP2.65□□□□□ -1.99
ATG38YLR211C COX3P00420 269 aa2.64□□□□□ -1.99
ATG38YLR211C IMA3P0CW40 589 aa2.64□□□□□ -1.99
ATG38YLR211C IMA4P0CW41 589 aa2.64□□□□□ -1.99
ATG38YLR211C RED1P14291 827 aa2.64□□□□□ -1.99
ATG38YLR211C CLN1P20437 546 aa2.64□□□□□ -1.99
ATG38YLR211C AAT2P23542 418 aaKnown RBP2.64□□□□□ -1.99
ATG38YLR211C YCL068CP25593 260 aa2.64□□□□□ -1.99
ATG38YLR211C PTI1P39927 425 aaPredicted RBP2.64□□□□□ -1.99
ATG38YLR211C OXA1P39952 402 aa2.64□□□□□ -1.99
ATG38YLR211C EGT2P42835 1041 aa2.64□□□□□ -1.99
ATG38YLR211C BIR1P47134 954 aa2.64□□□□□ -1.99
ATG38YLR211C MRM2P53123 320 aa2.64□□□□□ -1.99
ATG38YLR211C YGR018CP53211 109 aa2.64□□□□□ -1.99
ATG38YLR211C COS1P53822 381 aa2.64□□□□□ -1.99
ATG38YLR211C IMA2Q08295 589 aa2.64□□□□□ -1.99
ATG38YLR211C YGK3Q12222 375 aaPredicted RBP2.64□□□□□ -1.99
ATG38YLR211C TPT1Q12272 230 aaKnown RBP2.64□□□□□ -1.99
ATG38YLR211C NIP1P32497 812 aaKnown RBP2.63□□□□□ -1.99
ATG38YLR211C ATG18P43601 500 aa2.63□□□□□ -1.99
ATG38YLR211C YGL138CP53122 345 aa2.63□□□□□ -1.99
ATG38YLR211C CRH1P53301 507 aa2.63□□□□□ -1.99
ATG38YLR211C MRPS16Q02608 121 aa2.63□□□□□ -1.99
ATG38YLR211C CCE1Q03702 353 aa2.63□□□□□ -1.99
ATG38YLR211C URH1Q04179 340 aa2.63□□□□□ -1.99
ATG38YLR211C LIP2Q06005 328 aa2.63□□□□□ -1.99
ATG38YLR211C DNL4Q08387 944 aaPredicted RBP2.63□□□□□ -1.99
ATG38YLR211C ATG34Q12292 412 aa2.63□□□□□ -1.99
ATG38YLR211C RPB5P20434 215 aa2.62□□□□□ -1.99
ATG38YLR211C DPH5P32469 300 aaPredicted RBP2.62□□□□□ -1.99
ATG38YLR211C RRP1P35178 278 aaPredicted RBP2.62□□□□□ -1.99
ATG38YLR211C ANR2P36090 516 aaPredicted RBP2.62□□□□□ -1.99
ATG38YLR211C RRN10P38204 145 aa2.62□□□□□ -1.99
ATG38YLR211C NTC20P38302 140 aaPredicted RBP2.62□□□□□ -1.99
ATG38YLR211C MST27P53176 234 aa2.62□□□□□ -1.99
ATG38YLR211C YGR250CP53316 781 aaKnown RBP2.62□□□□□ -1.99
ATG38YLR211C SKO1Q02100 647 aa2.62□□□□□ -1.99
ATG38YLR211C MDM36Q06820 579 aa2.62□□□□□ -1.99
ATG38YLR211C MFG1Q07684 458 aa2.62□□□□□ -1.99
ATG38YLR211C DIS3Q08162 1001 aaKnown RBP2.62□□□□□ -1.99
ATG38YLR211C TY1B-AO13527 1196 aaKnown RBP2.61□□□□□ -1.99
ATG38YLR211C ADH1P00330 348 aaKnown RBP2.61□□□□□ -1.99
ATG38YLR211C COX4P04037 155 aa2.61□□□□□ -1.99
ATG38YLR211C CLC1P17891 233 aa2.61□□□□□ -1.99
ATG38YLR211C EXG1P23776 448 aaKnown RBP2.61□□□□□ -1.99
ATG38YLR211C CLB3P24870 427 aa2.61□□□□□ -1.99
ATG38YLR211C YKL097CP34245 136 aa2.61□□□□□ -1.99
ATG38YLR211C YHK8P38776 514 aa2.61□□□□□ -1.99
ATG38YLR211C COX14P39103 70 aa2.61□□□□□ -1.99
ATG38YLR211C ALD5P40047 520 aaKnown RBP2.61□□□□□ -1.99
ATG38YLR211C YFR057WP43625 151 aa2.61□□□□□ -1.99
ATG38YLR211C TDA1Q03533 586 aa2.61□□□□□ -1.99
ATG38YLR211C VHS1Q03785 461 aa2.61□□□□□ -1.99
ATG38YLR211C YET2Q04210 160 aa2.61□□□□□ -1.99
ATG38YLR211C COG4Q06096 861 aa2.61□□□□□ -1.99
ATG38YLR211C RRP9Q06506 573 aaKnown RBP2.61□□□□□ -1.99
ATG38YLR211C NDE2Q07500 545 aa2.61□□□□□ -1.99
ATG38YLR211C PSK1P31374 1356 aa2.61□□□□□ -1.99
ATG38YLR211C IES6P32617 166 aa2.6□□□□□ -1.99
ATG38YLR211C MPE1P35728 441 aaKnown RBP2.6□□□□□ -1.99
ATG38YLR211C OM14P38325 134 aa2.6□□□□□ -1.99
ATG38YLR211C RTN1Q04947 295 aaKnown RBP2.6□□□□□ -1.99
ATG38YLR211C IES4Q08561 116 aa2.6□□□□□ -1.99
ATG38YLR211C ADE4P04046 510 aaKnown RBP2.59□□□□□ -1.99
ATG38YLR211C CAP2P13517 287 aa2.59□□□□□ -1.99
ATG38YLR211C YPS6P40583 537 aa2.59□□□□□ -1.99
ATG38YLR211C CHS6P40955 746 aa2.59□□□□□ -1.99
ATG38YLR211C GPD2P41911 440 aaKnown RBP2.59□□□□□ -1.99
ATG38YLR211C LCB3P47013 409 aa2.59□□□□□ -1.99
ATG38YLR211C OCA2P53949 197 aa2.59□□□□□ -1.99
ATG38YLR211C CMS1Q07897 291 aaKnown RBP2.59□□□□□ -1.99
ATG38YLR211C YPQ1Q12010 308 aa2.59□□□□□ -1.99
ATG38YLR211C URA4P20051 364 aa2.58□□□□□ -2
ATG38YLR211C PRR1P28708 518 aa2.58□□□□□ -2
ATG38YLR211C RPN12P32496 274 aa2.58□□□□□ -2
ATG38YLR211C LSM5P40089 93 aaKnown RBP2.58□□□□□ -2
ATG38YLR211C KAP120Q02932 1032 aa2.58□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms