RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C SFI1Q12369 946 aa2.37□□□□□ -2.03
AFB1YLR040C YRF1-4O13559 1382 aa2.36□□□□□ -2.03
AFB1YLR040C TY1B-AO13527 1196 aaKnown RBP2.36□□□□□ -2.03
AFB1YLR040C BYE1P36106 594 aa2.36□□□□□ -2.03
AFB1YLR040C PCF11P39081 626 aaPredicted RBP2.36□□□□□ -2.03
AFB1YLR040C HAL1Q01766 294 aa2.36□□□□□ -2.03
AFB1YLR040C NUP116Q02630 1113 aa2.36□□□□□ -2.03
AFB1YLR040C DON1Q05610 365 aa2.36□□□□□ -2.03
AFB1YLR040C IRC25Q07951 179 aa2.36□□□□□ -2.03
AFB1YLR040C COX3P00420 269 aa2.35□□□□□ -2.03
AFB1YLR040C CLN1P20437 546 aa2.35□□□□□ -2.03
AFB1YLR040C ADK2P26364 225 aa2.35□□□□□ -2.03
AFB1YLR040C ERV1P27882 189 aa2.35□□□□□ -2.03
AFB1YLR040C NUP2P32499 720 aa2.35□□□□□ -2.03
AFB1YLR040C NFU1P32860 256 aa2.35□□□□□ -2.03
AFB1YLR040C RRN10P38204 145 aa2.35□□□□□ -2.03
AFB1YLR040C SBE22P38814 852 aa2.35□□□□□ -2.03
AFB1YLR040C SFH5P47008 294 aa2.35□□□□□ -2.03
AFB1YLR040C SRB7P47822 140 aa2.35□□□□□ -2.03
AFB1YLR040C KAP120Q02932 1032 aa2.35□□□□□ -2.03
AFB1YLR040C AFI1Q99222 893 aa2.35□□□□□ -2.03
AFB1YLR040C NAT1P12945 854 aaKnown RBP2.34□□□□□ -2.03
AFB1YLR040C FUR1P18562 216 aaKnown RBP2.34□□□□□ -2.03
AFB1YLR040C URA4P20051 364 aa2.34□□□□□ -2.03
AFB1YLR040C URA7P28274 579 aaKnown RBP2.34□□□□□ -2.03
AFB1YLR040C CHK1P38147 527 aa2.34□□□□□ -2.03
AFB1YLR040C AIM10P39965 576 aaKnown RBP2.34□□□□□ -2.03
AFB1YLR040C GAB1P41733 394 aa2.34□□□□□ -2.03
AFB1YLR040C MDE1P47095 244 aa2.34□□□□□ -2.03
AFB1YLR040C OCA2P53949 197 aa2.34□□□□□ -2.03
AFB1YLR040C ACL4Q03771 387 aa2.34□□□□□ -2.03
AFB1YLR040C YDR131CQ03899 556 aa2.34□□□□□ -2.03
AFB1YLR040C PLP2Q12017 286 aa2.34□□□□□ -2.03
AFB1YLR040C BUG1Q12191 341 aa2.34□□□□□ -2.03
AFB1YLR040C IMA3P0CW40 589 aa2.33□□□□□ -2.04
AFB1YLR040C IMA4P0CW41 589 aa2.33□□□□□ -2.04
AFB1YLR040C ARO3P14843 370 aaKnown RBP2.33□□□□□ -2.04
AFB1YLR040C REC107P21651 314 aa2.33□□□□□ -2.04
AFB1YLR040C BRF1P29056 596 aa2.33□□□□□ -2.04
AFB1YLR040C NIP1P32497 812 aaKnown RBP2.33□□□□□ -2.04
AFB1YLR040C MMS4P38257 691 aa2.33□□□□□ -2.04
AFB1YLR040C UTP18P40362 594 aaPredicted RBP2.33□□□□□ -2.04
AFB1YLR040C SIM1P40472 476 aa2.33□□□□□ -2.04
AFB1YLR040C ADA2Q02336 434 aa2.33□□□□□ -2.04
AFB1YLR040C CCE1Q03702 353 aa2.33□□□□□ -2.04
AFB1YLR040C URH1Q04179 340 aa2.33□□□□□ -2.04
AFB1YLR040C YMR130WQ04223 302 aa2.33□□□□□ -2.04
AFB1YLR040C DCS1Q06151 350 aa2.33□□□□□ -2.04
AFB1YLR040C MMR1Q06324 491 aa2.33□□□□□ -2.04
AFB1YLR040C IMA2Q08295 589 aa2.33□□□□□ -2.04
AFB1YLR040C CUE5Q08412 411 aaKnown RBP2.33□□□□□ -2.04
AFB1YLR040C ATG34Q12292 412 aa2.33□□□□□ -2.04
AFB1YLR040C IZH2Q12442 317 aa2.33□□□□□ -2.04
AFB1YLR040C ADE4P04046 510 aaKnown RBP2.32□□□□□ -2.04
AFB1YLR040C HSP26P15992 214 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
AFB1YLR040C YCL068CP25593 260 aa2.32□□□□□ -2.04
AFB1YLR040C PHA2P32452 334 aa2.32□□□□□ -2.04
AFB1YLR040C JNM1P36224 373 aa2.32□□□□□ -2.04
AFB1YLR040C MIG3P39943 394 aa2.32□□□□□ -2.04
AFB1YLR040C RPT4P53549 437 aaKnown RBP2.32□□□□□ -2.04
AFB1YLR040C MTQ1P53944 314 aa2.32□□□□□ -2.04
AFB1YLR040C VPS72Q03388 795 aa2.32□□□□□ -2.04
AFB1YLR040C TPT1Q12272 230 aaKnown RBP2.32□□□□□ -2.04
AFB1YLR040C YDL012CQ12489 107 aa2.32□□□□□ -2.04
AFB1YLR040C YKL097CP34245 136 aa2.31□□□□□ -2.04
AFB1YLR040C MRP21P38175 177 aa2.31□□□□□ -2.04
AFB1YLR040C NOC2P39744 710 aaKnown RBP2.31□□□□□ -2.04
AFB1YLR040C SER3P40054 469 aa2.31□□□□□ -2.04
AFB1YLR040C YIL029CP40538 142 aa2.31□□□□□ -2.04
AFB1YLR040C YPS6P40583 537 aa2.31□□□□□ -2.04
AFB1YLR040C MRM2P53123 320 aa2.31□□□□□ -2.04
AFB1YLR040C RRP9Q06506 573 aaKnown RBP2.31□□□□□ -2.04
AFB1YLR040C RAX1Q08760 435 aa2.31□□□□□ -2.04
AFB1YLR040C NAM2P11325 894 aa2.3□□□□□ -2.04
AFB1YLR040C MSI1P13712 422 aa2.3□□□□□ -2.04
AFB1YLR040C EXG1P23776 448 aaKnown RBP2.3□□□□□ -2.04
AFB1YLR040C TFB1P32776 642 aa2.3□□□□□ -2.04
AFB1YLR040C HEL1P36113 551 aa2.3□□□□□ -2.04
AFB1YLR040C SLM4P38247 162 aa2.3□□□□□ -2.04
AFB1YLR040C CAK1P43568 368 aaPredicted RBP2.3□□□□□ -2.04
AFB1YLR040C COS1P53822 381 aa2.3□□□□□ -2.04
AFB1YLR040C ERB1Q04660 807 aaKnown RBP2.3□□□□□ -2.04
AFB1YLR040C SNU66Q12420 587 aaPredicted RBP2.3□□□□□ -2.04
AFB1YLR040C PDX1P16451 410 aa2.29□□□□□ -2.04
AFB1YLR040C RPC53P25441 422 aa2.29□□□□□ -2.04
AFB1YLR040C RRP1P35178 278 aaPredicted RBP2.29□□□□□ -2.04
AFB1YLR040C ASC1P38011 319 aaKnown RBP2.29□□□□□ -2.04
AFB1YLR040C YBR056WP38081 501 aa2.29□□□□□ -2.04
AFB1YLR040C CHS6P40955 746 aa2.29□□□□□ -2.04
AFB1YLR040C TCB2P48231 1178 aa2.29□□□□□ -2.04
AFB1YLR040C TOM22P49334 152 aa2.29□□□□□ -2.04
AFB1YLR040C BNS1P50084 137 aa2.29□□□□□ -2.04
AFB1YLR040C STD1Q02794 444 aa2.29□□□□□ -2.04
AFB1YLR040C RPN9Q04062 393 aaKnown RBP2.29□□□□□ -2.04
AFB1YLR040C YLR345WQ06137 509 aa2.29□□□□□ -2.04
AFB1YLR040C VPS54Q12071 889 aa2.29□□□□□ -2.04
AFB1YLR040C YGK3Q12222 375 aaPredicted RBP2.29□□□□□ -2.04
AFB1YLR040C FAB1P34756 2278 aa2.28□□□□□ -2.04
AFB1YLR040C HOM3P10869 527 aa2.28□□□□□ -2.04
AFB1YLR040C CAP2P13517 287 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms