RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C MMR1Q06324 491 aa2.25□□□□□ -2.05
CMS1YLR003C ORT1Q12375 292 aa2.25□□□□□ -2.05
CMS1YLR003C TRP1P00912 224 aa2.24□□□□□ -2.05
CMS1YLR003C SCEIP03882 235 aa2.24□□□□□ -2.05
CMS1YLR003C PDE2P06776 526 aa2.24□□□□□ -2.05
CMS1YLR003C MDH1P17505 334 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
CMS1YLR003C RVS161P25343 265 aaKnown RBP2.24□□□□□ -2.05
CMS1YLR003C CDC60P26637 1090 aaKnown RBP2.24□□□□□ -2.05
CMS1YLR003C ITR1P30605 584 aa2.24□□□□□ -2.05
CMS1YLR003C SMY1P32364 656 aaKnown RBP2.24□□□□□ -2.05
CMS1YLR003C UTH1P36135 365 aa2.24□□□□□ -2.05
CMS1YLR003C MIX23P38162 196 aa2.24□□□□□ -2.05
CMS1YLR003C FAD1P38913 306 aa2.24□□□□□ -2.05
CMS1YLR003C PCF11P39081 626 aaPredicted RBP2.24□□□□□ -2.05
CMS1YLR003C TCB2P48231 1178 aa2.24□□□□□ -2.05
CMS1YLR003C GPI15P53961 229 aa2.24□□□□□ -2.05
CMS1YLR003C YMR027WQ04371 470 aa2.24□□□□□ -2.05
CMS1YLR003C YLR345WQ06137 509 aa2.24□□□□□ -2.05
CMS1YLR003C AEP3Q12089 606 aa2.24□□□□□ -2.05
CMS1YLR003C MED2Q12124 431 aa2.24□□□□□ -2.05
CMS1YLR003C MTR10Q99189 972 aa2.24□□□□□ -2.05
CMS1YLR003C RAD61Q99359 647 aa2.24□□□□□ -2.05
CMS1YLR003C NAM2P11325 894 aa2.23□□□□□ -2.05
CMS1YLR003C SPO12P17123 173 aa2.23□□□□□ -2.05
CMS1YLR003C PET123P17558 318 aa2.23□□□□□ -2.05
CMS1YLR003C RAD57P25301 460 aa2.23□□□□□ -2.05
CMS1YLR003C SDH3P33421 198 aa2.23□□□□□ -2.05
CMS1YLR003C MID2P36027 376 aa2.23□□□□□ -2.05
CMS1YLR003C PIM1P36775 1133 aa2.23□□□□□ -2.05
CMS1YLR003C RFC3P38629 340 aa2.23□□□□□ -2.05
CMS1YLR003C LCB2P40970 561 aa2.23□□□□□ -2.05
CMS1YLR003C PIB2P53191 635 aa2.23□□□□□ -2.05
CMS1YLR003C RSC1P53236 928 aa2.23□□□□□ -2.05
CMS1YLR003C HXT11P54862 567 aa2.23□□□□□ -2.05
CMS1YLR003C YMR181CQ03231 154 aa2.23□□□□□ -2.05
CMS1YLR003C DCI1Q08558 271 aa2.23□□□□□ -2.05
CMS1YLR003C RKM1Q08961 583 aaPredicted RBP2.23□□□□□ -2.05
CMS1YLR003C YRM1Q12340 786 aa2.23□□□□□ -2.05
CMS1YLR003C IMA3P0CW40 589 aa2.22□□□□□ -2.05
CMS1YLR003C IMA4P0CW41 589 aa2.22□□□□□ -2.05
CMS1YLR003C CPR2P23285 205 aa2.22□□□□□ -2.05
CMS1YLR003C PCL1P24867 279 aa2.22□□□□□ -2.05
CMS1YLR003C DAL2P25335 343 aa2.22□□□□□ -2.05
CMS1YLR003C CTR86P25355 563 aa2.22□□□□□ -2.05
CMS1YLR003C ATP3P38077 311 aaKnown RBP2.22□□□□□ -2.05
CMS1YLR003C YER079WP40052 210 aaKnown RBP2.22□□□□□ -2.05
CMS1YLR003C SER3P40054 469 aa2.22□□□□□ -2.05
CMS1YLR003C YJL055WP47044 245 aa2.22□□□□□ -2.05
CMS1YLR003C YGR111WP53265 400 aa2.22□□□□□ -2.05
CMS1YLR003C CIK1Q01649 594 aa2.22□□□□□ -2.05
CMS1YLR003C SXM1Q04175 944 aaKnown RBP2.22□□□□□ -2.05
CMS1YLR003C HRI1Q05905 244 aaKnown RBP2.22□□□□□ -2.05
CMS1YLR003C IMA2Q08295 589 aa2.22□□□□□ -2.05
CMS1YLR003C SKI7Q08491 747 aaPredicted RBP2.22□□□□□ -2.05
CMS1YLR003C GPM3Q12326 303 aa2.22□□□□□ -2.05
CMS1YLR003C ERP4Q12450 207 aa2.22□□□□□ -2.05
CMS1YLR003C CDC21P06785 304 aa2.21□□□□□ -2.06
CMS1YLR003C DST1P07273 309 aa2.21□□□□□ -2.06
CMS1YLR003C RIM1P32445 135 aaKnown RBP2.21□□□□□ -2.06
CMS1YLR003C CYS4P32582 507 aaKnown RBP2.21□□□□□ -2.06
CMS1YLR003C MNS1P32906 549 aa2.21□□□□□ -2.06
CMS1YLR003C ZTA1P38230 334 aaKnown RBP2.21□□□□□ -2.06
CMS1YLR003C YBR137WP38276 179 aa2.21□□□□□ -2.06
CMS1YLR003C YAL037WP39728 267 aa2.21□□□□□ -2.06
CMS1YLR003C RHO5P53879 331 aaKnown RBP2.21□□□□□ -2.06
CMS1YLR003C HAL1Q01766 294 aa2.21□□□□□ -2.06
CMS1YLR003C HER2Q03557 464 aa2.21□□□□□ -2.06
CMS1YLR003C TAF12Q03761 539 aa2.21□□□□□ -2.06
CMS1YLR003C TSA2Q04120 196 aa2.21□□□□□ -2.06
CMS1YLR003C RMD5Q12508 421 aa2.21□□□□□ -2.06
CMS1YLR003C ADE4P04046 510 aaKnown RBP2.2□□□□□ -2.06
CMS1YLR003C POP5P28005 173 aa2.2□□□□□ -2.06
CMS1YLR003C MRPL10P36520 322 aa2.2□□□□□ -2.06
CMS1YLR003C PAN6P40459 309 aa2.2□□□□□ -2.06
CMS1YLR003C VHS2P40463 436 aa2.2□□□□□ -2.06
CMS1YLR003C CWC25P53854 179 aaKnown RBP2.2□□□□□ -2.06
CMS1YLR003C NUP116Q02630 1113 aa2.2□□□□□ -2.06
CMS1YLR003C STD1Q02794 444 aa2.2□□□□□ -2.06
CMS1YLR003C PEX25Q02969 394 aa2.2□□□□□ -2.06
CMS1YLR003C MNE1P24720 663 aa2.19□□□□□ -2.06
CMS1YLR003C ASC1P38011 319 aaKnown RBP2.19□□□□□ -2.06
CMS1YLR003C CHK1P38147 527 aa2.19□□□□□ -2.06
CMS1YLR003C OLA1P38219 394 aaKnown RBP2.19□□□□□ -2.06
CMS1YLR003C MSG5P38590 489 aa2.19□□□□□ -2.06
CMS1YLR003C YHR131CP38835 850 aa2.19□□□□□ -2.06
CMS1YLR003C MMF1P40185 145 aaKnown RBP2.19□□□□□ -2.06
CMS1YLR003C YIL029CP40538 142 aa2.19□□□□□ -2.06
CMS1YLR003C SFH5P47008 294 aa2.19□□□□□ -2.06
CMS1YLR003C ROG1P53118 685 aa2.19□□□□□ -2.06
CMS1YLR003C RRP46P53256 223 aaPredicted RBP2.19□□□□□ -2.06
CMS1YLR003C RPT4P53549 437 aaKnown RBP2.19□□□□□ -2.06
CMS1YLR003C ALF1P53904 254 aa2.19□□□□□ -2.06
CMS1YLR003C MMT1Q03218 510 aa2.19□□□□□ -2.06
CMS1YLR003C CCE1Q03702 353 aa2.19□□□□□ -2.06
CMS1YLR003C BCH1Q05029 724 aa2.19□□□□□ -2.06
CMS1YLR003C NDE2Q07500 545 aa2.19□□□□□ -2.06
CMS1YLR003C SRL2Q12020 392 aa2.19□□□□□ -2.06
CMS1YLR003C BUG1Q12191 341 aa2.19□□□□□ -2.06
CMS1YLR003C ATG34Q12292 412 aa2.19□□□□□ -2.06
CMS1YLR003C WTM1Q12363 437 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 125.1 ms