RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C NOP19P53317 196 aaPredicted RBP6.72□□□□□ -1.33
PUP2YGR253C IRC15Q02733 499 aa6.72□□□□□ -1.33
PUP2YGR253C YPL071CQ02864 156 aa6.72□□□□□ -1.33
PUP2YGR253C YPR091CQ06833 770 aa6.72□□□□□ -1.33
PUP2YGR253C RPN5Q12250 445 aaKnown RBP6.72□□□□□ -1.33
PUP2YGR253C YOR097CQ12274 175 aaPredicted RBP6.72□□□□□ -1.33
PUP2YGR253C TRP3P00937 484 aa6.71□□□□□ -1.34
PUP2YGR253C ALG7P07286 448 aa6.71□□□□□ -1.34
PUP2YGR253C PTC6P25646 442 aa6.71□□□□□ -1.34
PUP2YGR253C HEM3P28789 327 aa6.71□□□□□ -1.34
PUP2YGR253C ERG9P29704 444 aa6.71□□□□□ -1.34
PUP2YGR253C YSC84P32793 468 aa6.71□□□□□ -1.34
PUP2YGR253C EMP70P32802 667 aa6.71□□□□□ -1.34
PUP2YGR253C SSO1P32867 290 aa6.71□□□□□ -1.34
PUP2YGR253C SEC31P38968 1273 aaKnown RBP6.71□□□□□ -1.34
PUP2YGR253C PFK26P40433 827 aaKnown RBP6.71□□□□□ -1.34
PUP2YGR253C MID1P41821 548 aa6.71□□□□□ -1.34
PUP2YGR253C PSA1P41940 361 aaKnown RBP6.71□□□□□ -1.34
PUP2YGR253C RPE1P46969 238 aa6.71□□□□□ -1.34
PUP2YGR253C MPA43P53583 542 aaPredicted RBP6.71□□□□□ -1.34
PUP2YGR253C YLR460CP54007 376 aa6.71□□□□□ -1.34
PUP2YGR253C RHO4Q00246 291 aa6.71□□□□□ -1.34
PUP2YGR253C PFA5Q03289 374 aa6.71□□□□□ -1.34
PUP2YGR253C EFR3Q03653 782 aaKnown RBP6.71□□□□□ -1.34
PUP2YGR253C YDR124WQ04608 324 aa6.71□□□□□ -1.34
PUP2YGR253C YLR446WQ06204 433 aa6.71□□□□□ -1.34
PUP2YGR253C TDA5Q06417 326 aaKnown RBP6.71□□□□□ -1.34
PUP2YGR253C PUN1Q06991 263 aa6.71□□□□□ -1.34
PUP2YGR253C YLL007CQ07799 665 aa6.71□□□□□ -1.34
PUP2YGR253C RCN2Q12044 265 aa6.71□□□□□ -1.34
PUP2YGR253C YKL033W-AQ86ZR7 236 aa6.71□□□□□ -1.34
PUP2YGR253C YOS9Q99220 542 aa6.71□□□□□ -1.34
PUP2YGR253C YFR010W-AP0C5N0 62 aa6.7□□□□□ -1.34
PUP2YGR253C MCM1P11746 286 aa6.7□□□□□ -1.34
PUP2YGR253C GLG1P36143 616 aa6.7□□□□□ -1.34
PUP2YGR253C LIN1P38852 340 aaPredicted RBP6.7□□□□□ -1.34
PUP2YGR253C HRB1P38922 454 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
PUP2YGR253C AIM2P39721 246 aa6.7□□□□□ -1.34
PUP2YGR253C PZF1P39933 429 aa6.7□□□□□ -1.34
PUP2YGR253C SHR5P41912 237 aa6.7□□□□□ -1.34
PUP2YGR253C ARC1P46672 376 aaKnown RBP6.7□□□□□ -1.34
PUP2YGR253C MAD3P47074 515 aa6.7□□□□□ -1.34
PUP2YGR253C CDH1P53197 566 aa6.7□□□□□ -1.34
PUP2YGR253C YGR079WP53249 370 aa6.7□□□□□ -1.34
PUP2YGR253C TPC1P53257 314 aa6.7□□□□□ -1.34
PUP2YGR253C ALG12P53730 551 aa6.7□□□□□ -1.34
PUP2YGR253C IDP3P53982 420 aaKnown RBP6.7□□□□□ -1.34
PUP2YGR253C YPL107WQ02873 248 aa6.7□□□□□ -1.34
PUP2YGR253C MIX14Q04341 121 aa6.7□□□□□ -1.34
PUP2YGR253C SMA2Q04658 369 aa6.7□□□□□ -1.34
PUP2YGR253C GAS2Q06135 555 aa6.7□□□□□ -1.34
PUP2YGR253C HER1Q12276 1246 aa6.7□□□□□ -1.34
PUP2YGR253C YVC1Q12324 675 aa6.7□□□□□ -1.34
PUP2YGR253C MMP1Q12372 583 aa6.7□□□□□ -1.34
PUP2YGR253C SPE4Q12455 300 aa6.7□□□□□ -1.34
PUP2YGR253C HMG1P12683 1054 aa6.69□□□□□ -1.34
PUP2YGR253C MAK32P23060 363 aa6.69□□□□□ -1.34
PUP2YGR253C SHU2P38957 223 aa6.69□□□□□ -1.34
PUP2YGR253C LSM4P40070 187 aaKnown RBP6.69□□□□□ -1.34
PUP2YGR253C XBP1P40489 647 aa6.69□□□□□ -1.34
PUP2YGR253C YIL067CP40514 678 aa6.69□□□□□ -1.34
PUP2YGR253C PTR3P43606 678 aa6.69□□□□□ -1.34
PUP2YGR253C GTO1P48239 356 aa6.69□□□□□ -1.34
PUP2YGR253C GOR1P53839 350 aa6.69□□□□□ -1.34
PUP2YGR253C UBX4P54730 416 aa6.69□□□□□ -1.34
PUP2YGR253C SEI1Q06058 285 aa6.69□□□□□ -1.34
PUP2YGR253C GMC2Q06201 188 aa6.69□□□□□ -1.34
PUP2YGR253C YDL121CQ07541 149 aa6.69□□□□□ -1.34
PUP2YGR253C FDH1Q08911 376 aa6.69□□□□□ -1.34
PUP2YGR253C SLF1Q12034 447 aaKnown RBP6.69□□□□□ -1.34
PUP2YGR253C MDM12Q92328 271 aa6.69□□□□□ -1.34
PUP2YGR253C MTR10Q99189 972 aa6.69□□□□□ -1.34
PUP2YGR253C TAD3Q9URQ3 322 aa6.69□□□□□ -1.34
PUP2YGR253C Q0144Q9ZZW2 109 aa6.69□□□□□ -1.34
PUP2YGR253C TY4B-PA0A0B7P3V8 1104 aa6.68□□□□□ -1.34
PUP2YGR253C STE12P13574 688 aa6.68□□□□□ -1.34
PUP2YGR253C RPB5P20434 215 aa6.68□□□□□ -1.34
PUP2YGR253C ATS1P31386 333 aa6.68□□□□□ -1.34
PUP2YGR253C AAR2P32357 355 aaPredicted RBP6.68□□□□□ -1.34
PUP2YGR253C CAT2P32796 670 aaKnown RBP6.68□□□□□ -1.34
PUP2YGR253C LOS1P33418 1100 aaPredicted RBP6.68□□□□□ -1.34
PUP2YGR253C SNU114P36048 1008 aaKnown RBP6.68□□□□□ -1.34
PUP2YGR253C CAF4P36130 643 aa6.68□□□□□ -1.34
PUP2YGR253C EDS1P38073 919 aa6.68□□□□□ -1.34
PUP2YGR253C HSM3P38348 480 aa6.68□□□□□ -1.34
PUP2YGR253C RIX1P38883 763 aaPredicted RBP6.68□□□□□ -1.34
PUP2YGR253C SOK1P40317 901 aa6.68□□□□□ -1.34
PUP2YGR253C YIL169CP40442 995 aa6.68□□□□□ -1.34
PUP2YGR253C PGU1P47180 361 aa6.68□□□□□ -1.34
PUP2YGR253C NAS6P50086 228 aa6.68□□□□□ -1.34
PUP2YGR253C HOS2P53096 452 aaPredicted RBP6.68□□□□□ -1.34
PUP2YGR253C GIS1Q03833 894 aa6.68□□□□□ -1.34
PUP2YGR253C YRA1Q12159 226 aaKnown RBP6.68□□□□□ -1.34
PUP2YGR253C PSF1Q12488 208 aa6.68□□□□□ -1.34
PUP2YGR253C SKS1Q12505 502 aa6.68□□□□□ -1.34
PUP2YGR253C FLO9P39712 1322 aa6.68□□□□□ -1.34
PUP2YGR253C YPR096CO13587 100 aa6.67□□□□□ -1.34
PUP2YGR253C ATP4P05626 244 aa6.67□□□□□ -1.34
PUP2YGR253C ARF1P11076 181 aaKnown RBP6.67□□□□□ -1.34
PUP2YGR253C ERD1P16151 362 aa6.67□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms