RNA–Protein interactions for RNA: YDR544C

YDR544C, Transcript of Dubious open reading frame, yeast

Gene YDR544C, Length 429 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR544C	YDR544C	LDS2	Q08218	356 aa		0.44	□□□□□ -2.34
YDR544C	YDR544C	SRL2	Q12020	392 aa		0.44	□□□□□ -2.34
YDR544C	YDR544C	RLM1	Q12224	676 aa		0.44	□□□□□ -2.34
YDR544C	YDR544C	TPT1	Q12272	230 aa	Known RBP	0.44	□□□□□ -2.34
YDR544C	YDR544C	AVL9	Q12500	764 aa		0.44	□□□□□ -2.34
YDR544C	YDR544C	YJR112W-A	Q3E743	109 aa		0.44	□□□□□ -2.34
YDR544C	YDR544C	SSM4	P40318	1319 aa		0.43	□□□□□ -2.34
YDR544C	YDR544C	DAL5	P15365	543 aa		0.43	□□□□□ -2.34
YDR544C	YDR544C	MKK1	P32490	508 aa		0.43	□□□□□ -2.34
YDR544C	YDR544C	THI2	P38141	450 aa		0.43	□□□□□ -2.34
YDR544C	YDR544C	COX14	P39103	70 aa		0.43	□□□□□ -2.34
YDR544C	YDR544C	FHL1	P39521	936 aa		0.43	□□□□□ -2.34
YDR544C	YDR544C	RBG1	P39729	369 aa		0.43	□□□□□ -2.34
YDR544C	YDR544C	SAP185	P40856	1058 aa		0.43	□□□□□ -2.34
YDR544C	YDR544C	EGT2	P42835	1041 aa		0.43	□□□□□ -2.34
YDR544C	YDR544C	STB1	P42845	420 aa		0.43	□□□□□ -2.34
YDR544C	YDR544C	YGR021W	P53212	290 aa		0.43	□□□□□ -2.34
YDR544C	YDR544C	YGR066C	P53242	292 aa		0.43	□□□□□ -2.34
YDR544C	YDR544C	NUP116	Q02630	1113 aa		0.43	□□□□□ -2.34
YDR544C	YDR544C	TAF12	Q03761	539 aa		0.43	□□□□□ -2.34
YDR544C	YDR544C	YDL114W	Q07530	308 aa		0.43	□□□□□ -2.34
YDR544C	YDR544C	SMC5	Q08204	1093 aa		0.43	□□□□□ -2.34
YDR544C	YDR544C	TIR4	Q12218	487 aa	Predicted RBP	0.43	□□□□□ -2.34
YDR544C	YDR544C	NAG1	Q8TGN9	163 aa		0.43	□□□□□ -2.34
YDR544C	YDR544C	YOR338W	Q99326	363 aa		0.43	□□□□□ -2.34
YDR544C	YDR544C	GPH1	P06738	902 aa	Known RBP	0.42	□□□□□ -2.34
YDR544C	YDR544C	ADH3	P07246	375 aa	Known RBP	0.42	□□□□□ -2.34
YDR544C	YDR544C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	0.42	□□□□□ -2.34	not detected
YDR544C	YDR544C	RIP1	P08067	215 aa		0.42	□□□□□ -2.34
YDR544C	YDR544C	CHS3	P29465	1165 aa		0.42	□□□□□ -2.34
YDR544C	YDR544C	YPS1	P32329	569 aa		0.42	□□□□□ -2.34
YDR544C	YDR544C	NIP1	P32497	812 aa	Known RBP	0.42	□□□□□ -2.34
YDR544C	YDR544C	SLC1	P33333	303 aa		0.42	□□□□□ -2.34
YDR544C	YDR544C	NIP100	P33420	868 aa		0.42	□□□□□ -2.34
YDR544C	YDR544C	RRN3	P36070	627 aa		0.42	□□□□□ -2.34
YDR544C	YDR544C	YHK8	P38776	514 aa		0.42	□□□□□ -2.34
YDR544C	YDR544C	YAL037W	P39728	267 aa		0.42	□□□□□ -2.34
YDR544C	YDR544C	DPH1	P40487	425 aa	Known RBP	0.42	□□□□□ -2.34
YDR544C	YDR544C	SAS2	P40963	338 aa		0.42	□□□□□ -2.34
YDR544C	YDR544C	AIP1	P46680	615 aa	Known RBP	0.42	□□□□□ -2.34
YDR544C	YDR544C	YJR011C	P47086	261 aa	Predicted RBP	0.42	□□□□□ -2.34
YDR544C	YDR544C	MRM2	P53123	320 aa		0.42	□□□□□ -2.34
YDR544C	YDR544C	RMD9	P53140	646 aa	Known RBP	0.42	□□□□□ -2.34
YDR544C	YDR544C	BET5	Q03630	159 aa		0.42	□□□□□ -2.34
YDR544C	YDR544C	GIR2	Q03768	265 aa	Predicted RBP	0.42	□□□□□ -2.34
YDR544C	YDR544C	YDR387C	Q04162	555 aa		0.42	□□□□□ -2.34
YDR544C	YDR544C	FAR10	Q06001	478 aa		0.42	□□□□□ -2.34
YDR544C	YDR544C	LOT6	Q07923	191 aa		0.42	□□□□□ -2.34
YDR544C	YDR544C	SKM1	Q12469	655 aa		0.42	□□□□□ -2.34
YDR544C	YDR544C	ILV5	P06168	395 aa	Known RBP	0.41	□□□□□ -2.34
YDR544C	YDR544C	SPO12	P17123	173 aa		0.41	□□□□□ -2.34
YDR544C	YDR544C	CKA2	P19454	339 aa		0.41	□□□□□ -2.34
YDR544C	YDR544C	GEX1	P25596	615 aa		0.41	□□□□□ -2.34
YDR544C	YDR544C	RAD14	P28519	371 aa		0.41	□□□□□ -2.34
YDR544C	YDR544C	MSP1	P28737	362 aa		0.41	□□□□□ -2.34
YDR544C	YDR544C	SIN4	P32259	974 aa		0.41	□□□□□ -2.34
YDR544C	YDR544C	ALK2	P32789	676 aa	Predicted RBP	0.41	□□□□□ -2.34
YDR544C	YDR544C	COX13	P32799	129 aa		0.41	□□□□□ -2.34
YDR544C	YDR544C	PTH2	P34222	208 aa		0.41	□□□□□ -2.34
YDR544C	YDR544C	YBL029W	P38201	376 aa		0.41	□□□□□ -2.34
YDR544C	YDR544C	SHE3	P38272	425 aa	Known RBP	0.41	□□□□□ -2.34
YDR544C	YDR544C	YHR054C	P38780	354 aa		0.41	□□□□□ -2.34
YDR544C	YDR544C	LSM12	P38828	187 aa	Known RBP	0.41	□□□□□ -2.34
YDR544C	YDR544C	PEX22	P39718	180 aa		0.41	□□□□□ -2.34
YDR544C	YDR544C	MAM33	P40513	266 aa		0.41	□□□□□ -2.34
YDR544C	YDR544C	AIM24	P47127	394 aa		0.41	□□□□□ -2.34
YDR544C	YDR544C	GPI15	P53961	229 aa		0.41	□□□□□ -2.34
YDR544C	YDR544C	GTR1	Q00582	310 aa		0.41	□□□□□ -2.34
YDR544C	YDR544C	INP2	Q03824	705 aa		0.41	□□□□□ -2.34
YDR544C	YDR544C	YLR345W	Q06137	509 aa		0.41	□□□□□ -2.34
YDR544C	YDR544C	YLR278C	Q05854	1341 aa		0.4	□□□□□ -2.34
YDR544C	YDR544C	CDC16	P09798	840 aa		0.4	□□□□□ -2.35
YDR544C	YDR544C	FUS3	P16892	353 aa	Known RBP	0.4	□□□□□ -2.35
YDR544C	YDR544C	SPB1	P25582	841 aa	Predicted RBP	0.4	□□□□□ -2.35
YDR544C	YDR544C	YCL068C	P25593	260 aa		0.4	□□□□□ -2.35
YDR544C	YDR544C	FUN26	P31381	517 aa		0.4	□□□□□ -2.35
YDR544C	YDR544C	DPH5	P32469	300 aa	Predicted RBP	0.4	□□□□□ -2.35
YDR544C	YDR544C	SKT5	P34226	696 aa		0.4	□□□□□ -2.35
YDR544C	YDR544C	MET28	P40573	187 aa		0.4	□□□□□ -2.35
YDR544C	YDR544C	HAC1	P41546	238 aa		0.4	□□□□□ -2.35
YDR544C	YDR544C	MNN5	P46982	586 aa		0.4	□□□□□ -2.35
YDR544C	YDR544C	SEH1	P53011	349 aa	Known RBP	0.4	□□□□□ -2.35
YDR544C	YDR544C	YGR250C	P53316	781 aa	Known RBP	0.4	□□□□□ -2.35
YDR544C	YDR544C	COS1	P53822	381 aa		0.4	□□□□□ -2.35
YDR544C	YDR544C	NGL3	Q03210	505 aa		0.4	□□□□□ -2.35
YDR544C	YDR544C	TDA1	Q03533	586 aa		0.4	□□□□□ -2.35
YDR544C	YDR544C	PRM6	Q04705	352 aa		0.4	□□□□□ -2.35
YDR544C	YDR544C	DDC1	Q08949	612 aa		0.4	□□□□□ -2.35
YDR544C	YDR544C	HIF1	Q12373	385 aa		0.4	□□□□□ -2.35
YDR544C	YDR544C	SPS4	P09937	338 aa		0.39	□□□□□ -2.35
YDR544C	YDR544C	SNF6	P18888	332 aa		0.39	□□□□□ -2.35
YDR544C	YDR544C	PHO84	P25297	587 aa	Known RBP	0.39	□□□□□ -2.35
YDR544C	YDR544C	GIT1	P25346	518 aa		0.39	□□□□□ -2.35
YDR544C	YDR544C	ZIP1	P31111	875 aa		0.39	□□□□□ -2.35
YDR544C	YDR544C	TKL2	P33315	681 aa		0.39	□□□□□ -2.35
YDR544C	YDR544C	ECM34	P38728	170 aa		0.39	□□□□□ -2.35
YDR544C	YDR544C	PFS1	P38872	237 aa		0.39	□□□□□ -2.35
YDR544C	YDR544C	IES5	P40060	125 aa		0.39	□□□□□ -2.35
YDR544C	YDR544C	KEG1	P43614	200 aa		0.39	□□□□□ -2.35
YDR544C	YDR544C	HMS2	P47175	358 aa		0.39	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms