RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C YFL067WP43537 175 aa1.62□□□□□ -2.15
SWI5YDR146C AZR1P50080 613 aa1.62□□□□□ -2.15
SWI5YDR146C HER2Q03557 464 aa1.62□□□□□ -2.15
SWI5YDR146C BCH1Q05029 724 aa1.62□□□□□ -2.15
SWI5YDR146C HEL2Q05580 639 aaKnown RBP1.62□□□□□ -2.15
SWI5YDR146C SNX3Q08826 162 aaKnown RBP1.62□□□□□ -2.15
SWI5YDR146C HRT3Q12347 344 aa1.62□□□□□ -2.15
SWI5YDR146C ADH2P00331 348 aaKnown RBP1.61□□□□□ -2.15
SWI5YDR146C NFT1P0CE68 1218 aa1.61□□□□□ -2.15
SWI5YDR146C CLN3P13365 580 aa1.61□□□□□ -2.15
SWI5YDR146C SPO7P18410 259 aa1.61□□□□□ -2.15
SWI5YDR146C VMA8P32610 256 aaKnown RBP1.61□□□□□ -2.15
SWI5YDR146C PAD1P33751 242 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15not detected
SWI5YDR146C NDT80P38830 627 aa1.61□□□□□ -2.15
SWI5YDR146C GAT2P40209 560 aa1.61□□□□□ -2.15
SWI5YDR146C PAN6P40459 309 aa1.61□□□□□ -2.15
SWI5YDR146C NCA3P46955 337 aa1.61□□□□□ -2.15
SWI5YDR146C PHB2P50085 310 aa1.61□□□□□ -2.15
SWI5YDR146C COS1P53822 381 aa1.61□□□□□ -2.15
SWI5YDR146C BET5Q03630 159 aa1.61□□□□□ -2.15
SWI5YDR146C PRP42Q03776 544 aaKnown RBP1.61□□□□□ -2.15
SWI5YDR146C SMA2Q04658 369 aa1.61□□□□□ -2.15
SWI5YDR146C YDR341CQ05506 607 aaKnown RBP1.61□□□□□ -2.15
SWI5YDR146C YLR456WQ06199 204 aa1.61□□□□□ -2.15
SWI5YDR146C BUG1Q12191 341 aa1.61□□□□□ -2.15
SWI5YDR146C REV1P12689 985 aa1.61□□□□□ -2.15
SWI5YDR146C LDB16P25587 256 aa1.61□□□□□ -2.15
SWI5YDR146C DBF4P32325 704 aa1.61□□□□□ -2.15
SWI5YDR146C HEL1P36113 551 aa1.61□□□□□ -2.15
SWI5YDR146C ZTA1P38230 334 aaKnown RBP1.61□□□□□ -2.15
SWI5YDR146C STP2P38704 541 aa1.61□□□□□ -2.15
SWI5YDR146C PRE5P40302 234 aaKnown RBP1.61□□□□□ -2.15
SWI5YDR146C SFH5P47008 294 aa1.61□□□□□ -2.15
SWI5YDR146C OAZ1Q02803 292 aa1.61□□□□□ -2.15
SWI5YDR146C HRI1Q05905 244 aaKnown RBP1.61□□□□□ -2.15
SWI5YDR146C RRP9Q06506 573 aaKnown RBP1.61□□□□□ -2.15
SWI5YDR146C REX4Q08237 289 aa1.61□□□□□ -2.15
SWI5YDR146C RAX1Q08760 435 aa1.61□□□□□ -2.15
SWI5YDR146C RRG7Q08774 242 aaPredicted RBP1.61□□□□□ -2.15
SWI5YDR146C RUP1Q12242 671 aa1.61□□□□□ -2.15
SWI5YDR146C RBD2Q12270 262 aa1.61□□□□□ -2.15
SWI5YDR146C TPT1Q12272 230 aaKnown RBP1.61□□□□□ -2.15
SWI5YDR146C PHA2P32452 334 aa1.6□□□□□ -2.15
SWI5YDR146C MUD1P32605 298 aaKnown RBP1.6□□□□□ -2.15
SWI5YDR146C LTV1P34078 463 aa1.6□□□□□ -2.15
SWI5YDR146C SRP72P38688 640 aaKnown RBP1.6□□□□□ -2.15
SWI5YDR146C PTH1P38876 190 aaKnown RBP1.6□□□□□ -2.15
SWI5YDR146C WWM1P43582 211 aaKnown RBP1.6□□□□□ -2.15
SWI5YDR146C YGR111WP53265 400 aa1.6□□□□□ -2.15
SWI5YDR146C RHO5P53879 331 aaKnown RBP1.6□□□□□ -2.15
SWI5YDR146C MHR1Q06630 226 aa1.6□□□□□ -2.15
SWI5YDR146C SNU66Q12420 587 aaPredicted RBP1.6□□□□□ -2.15
SWI5YDR146C ISA2Q12425 185 aa1.6□□□□□ -2.15
SWI5YDR146C SRV2P17555 526 aaKnown RBP1.6□□□□□ -2.15
SWI5YDR146C PET123P17558 318 aa1.6□□□□□ -2.15
SWI5YDR146C YEL045CP32616 141 aa1.6□□□□□ -2.15
SWI5YDR146C YKL097CP34245 136 aa1.6□□□□□ -2.15
SWI5YDR146C LRP1P38801 184 aaKnown RBP1.6□□□□□ -2.15
SWI5YDR146C GPI16P38875 610 aa1.6□□□□□ -2.15
SWI5YDR146C BUD27P43573 796 aaKnown RBP RIP-Chip data1.6□□□□□ -2.15not detected
SWI5YDR146C SHE10P53075 577 aa1.6□□□□□ -2.15
SWI5YDR146C CWC25P53854 179 aaKnown RBP1.6□□□□□ -2.15
SWI5YDR146C NDL1Q06568 189 aa1.6□□□□□ -2.15
SWI5YDR146C NOP6Q07623 225 aaKnown RBP1.6□□□□□ -2.15
SWI5YDR146C GPM3Q12326 303 aa1.6□□□□□ -2.15
SWI5YDR146C SMC6Q12749 1114 aa1.6□□□□□ -2.15
SWI5YDR146C HOM3P10869 527 aa1.59□□□□□ -2.15
SWI5YDR146C PXA2P34230 853 aa1.59□□□□□ -2.15
SWI5YDR146C RRP1P35178 278 aaPredicted RBP1.59□□□□□ -2.15
SWI5YDR146C OLA1P38219 394 aaKnown RBP1.59□□□□□ -2.15
SWI5YDR146C SBE22P38814 852 aa1.59□□□□□ -2.15
SWI5YDR146C FAD1P38913 306 aa1.59□□□□□ -2.15
SWI5YDR146C TOS2P50078 622 aa1.59□□□□□ -2.15
SWI5YDR146C SDT1P53078 280 aa1.59□□□□□ -2.15
SWI5YDR146C RSC1P53236 928 aa1.59□□□□□ -2.15
SWI5YDR146C CIK1Q01649 594 aa1.59□□□□□ -2.15
SWI5YDR146C STD1Q02794 444 aa1.59□□□□□ -2.15
SWI5YDR146C VPS54Q12071 889 aa1.59□□□□□ -2.15
SWI5YDR146C AEP3Q12089 606 aa1.59□□□□□ -2.15
SWI5YDR146C ERP4Q12450 207 aa1.59□□□□□ -2.15
SWI5YDR146C DAL2P25335 343 aa1.58□□□□□ -2.16
SWI5YDR146C YCL068CP25593 260 aa1.58□□□□□ -2.16
SWI5YDR146C POP5P28005 173 aa1.58□□□□□ -2.16
SWI5YDR146C MNS1P32906 549 aa1.58□□□□□ -2.16
SWI5YDR146C MRPL4P36517 319 aa1.58□□□□□ -2.16
SWI5YDR146C YJR085CP47131 105 aaKnown RBP1.58□□□□□ -2.16
SWI5YDR146C BRO1P48582 844 aa1.58□□□□□ -2.16
SWI5YDR146C YLR152CP54072 576 aa1.58□□□□□ -2.16
SWI5YDR146C TSA2Q04120 196 aa1.58□□□□□ -2.16
SWI5YDR146C SPE3Q12074 293 aaKnown RBP1.58□□□□□ -2.16
SWI5YDR146C RNH203Q12338 110 aa1.58□□□□□ -2.16
SWI5YDR146C AHC1Q12433 566 aa1.58□□□□□ -2.16
SWI5YDR146C ALG1P16661 449 aa1.58□□□□□ -2.16
SWI5YDR146C CHK1P38147 527 aa1.58□□□□□ -2.16
SWI5YDR146C INM1P38710 295 aa1.58□□□□□ -2.16
SWI5YDR146C MMT1Q03218 510 aa1.58□□□□□ -2.16
SWI5YDR146C PRP3Q03338 469 aaPredicted RBP1.58□□□□□ -2.16
SWI5YDR146C MDM36Q06820 579 aa1.58□□□□□ -2.16
SWI5YDR146C RPN5Q12250 445 aaKnown RBP1.58□□□□□ -2.16
SWI5YDR146C YBR056W-AI2HB52 66 aa1.57□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms