RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W EFM2P38347 419 aa1.62□□□□□ -2.15
MSH5YDL154W LRP1P38801 184 aaKnown RBP1.62□□□□□ -2.15
MSH5YDL154W FAU1P40099 211 aa1.62□□□□□ -2.15
MSH5YDL154W SEC28P40509 296 aaKnown RBP1.62□□□□□ -2.15
MSH5YDL154W OCA2P53949 197 aa1.62□□□□□ -2.15
MSH5YDL154W PNG1Q02890 363 aa1.62□□□□□ -2.15
MSH5YDL154W YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.62□□□□□ -2.15not detected
MSH5YDL154W RIP1P08067 215 aa1.61□□□□□ -2.15
MSH5YDL154W RPL20AP0CX23 172 aaKnown RBP1.61□□□□□ -2.15
MSH5YDL154W RPL20BP0CX24 172 aaPredicted RBP1.61□□□□□ -2.15
MSH5YDL154W PMR1P13586 950 aa1.61□□□□□ -2.15
MSH5YDL154W NDI1P32340 513 aa1.61□□□□□ -2.15
MSH5YDL154W ECM25P32525 599 aa1.61□□□□□ -2.15
MSH5YDL154W LTV1P34078 463 aa1.61□□□□□ -2.15
MSH5YDL154W RRN10P38204 145 aa1.61□□□□□ -2.15
MSH5YDL154W WSS1P38838 269 aa1.61□□□□□ -2.15
MSH5YDL154W FAD1P38913 306 aa1.61□□□□□ -2.15
MSH5YDL154W PCF11P39081 626 aaPredicted RBP1.61□□□□□ -2.15
MSH5YDL154W YFL067WP43537 175 aa1.61□□□□□ -2.15
MSH5YDL154W GUF1P46943 645 aa1.61□□□□□ -2.15
MSH5YDL154W YJL132WP47014 750 aa1.61□□□□□ -2.15
MSH5YDL154W GWT1P47026 490 aa1.61□□□□□ -2.15
MSH5YDL154W DRN1P53255 507 aaKnown RBP1.61□□□□□ -2.15
MSH5YDL154W PEX25Q02969 394 aa1.61□□□□□ -2.15
MSH5YDL154W BET5Q03630 159 aa1.61□□□□□ -2.15
MSH5YDL154W YPL199CQ08954 240 aa1.61□□□□□ -2.15
MSH5YDL154W SPE3Q12074 293 aaKnown RBP1.61□□□□□ -2.15
MSH5YDL154W SAM1P10659 382 aaKnown RBP1.61□□□□□ -2.15
MSH5YDL154W SAM2P19358 384 aaKnown RBP1.61□□□□□ -2.15
MSH5YDL154W RIM1P32445 135 aaKnown RBP1.61□□□□□ -2.15
MSH5YDL154W SOR1P35497 357 aaKnown RBP1.61□□□□□ -2.15
MSH5YDL154W PMU1P36069 295 aa1.61□□□□□ -2.15
MSH5YDL154W YBR056WP38081 501 aa1.61□□□□□ -2.15
MSH5YDL154W OLA1P38219 394 aaKnown RBP1.61□□□□□ -2.15
MSH5YDL154W RXT2P38255 430 aa1.61□□□□□ -2.15
MSH5YDL154W YAT2P40017 923 aa1.61□□□□□ -2.15
MSH5YDL154W EFM4P40516 257 aa1.61□□□□□ -2.15
MSH5YDL154W PHB2P50085 310 aa1.61□□□□□ -2.15
MSH5YDL154W YIP1P53039 248 aa1.61□□□□□ -2.15
MSH5YDL154W PIR3Q03180 325 aa1.61□□□□□ -2.15
MSH5YDL154W SOR2Q07786 357 aa1.61□□□□□ -2.15
MSH5YDL154W YDR061WQ12298 539 aa1.61□□□□□ -2.15
MSH5YDL154W RKM5Q12367 367 aa1.61□□□□□ -2.15
MSH5YDL154W VPS13Q07878 3144 aa1.61□□□□□ -2.15
MSH5YDL154W RPL43AP0CX25 92 aaKnown RBP1.6□□□□□ -2.15
MSH5YDL154W RPL43BP0CX26 92 aa1.6□□□□□ -2.15
MSH5YDL154W SPO12P17123 173 aa1.6□□□□□ -2.15
MSH5YDL154W OPI1P21957 404 aa1.6□□□□□ -2.15
MSH5YDL154W PRP21P32524 280 aaPredicted RBP1.6□□□□□ -2.15
MSH5YDL154W PIM1P36775 1133 aa1.6□□□□□ -2.15
MSH5YDL154W LYS1P38998 373 aaRIP-Chip data1.6□□□□□ -2.15 RIP-Chip
MSH5YDL154W SAS2P40963 338 aa1.6□□□□□ -2.15
MSH5YDL154W LAM5P43560 674 aa1.6□□□□□ -2.15
MSH5YDL154W TRS85P46944 698 aa1.6□□□□□ -2.15
MSH5YDL154W RTT101P47050 842 aa1.6□□□□□ -2.15
MSH5YDL154W SSN8P47821 323 aa1.6□□□□□ -2.15
MSH5YDL154W MDG1P53885 366 aa1.6□□□□□ -2.15
MSH5YDL154W KEL3Q08979 651 aaPredicted RBP1.6□□□□□ -2.15
MSH5YDL154W PKH2Q12236 1081 aaKnown RBP1.6□□□□□ -2.15
MSH5YDL154W SET6Q12529 373 aa1.6□□□□□ -2.15
MSH5YDL154W DYN1P36022 4092 aa1.6□□□□□ -2.15
MSH5YDL154W HSP82P02829 709 aaKnown RBP1.6□□□□□ -2.15
MSH5YDL154W ARG4P04076 463 aaPredicted RBP1.6□□□□□ -2.15
MSH5YDL154W CPR1P14832 162 aaKnown RBP1.6□□□□□ -2.15
MSH5YDL154W SPC110P32380 944 aa1.6□□□□□ -2.15
MSH5YDL154W VPH1P32563 840 aaKnown RBP1.6□□□□□ -2.15
MSH5YDL154W YND1P40009 630 aa1.6□□□□□ -2.15
MSH5YDL154W VMA13P41807 478 aaKnown RBP1.6□□□□□ -2.15
MSH5YDL154W EPL1P43572 832 aa1.6□□□□□ -2.15
MSH5YDL154W YJR011CP47086 261 aaPredicted RBP1.6□□□□□ -2.15
MSH5YDL154W RPT4P53549 437 aaKnown RBP1.6□□□□□ -2.15
MSH5YDL154W RPN5Q12250 445 aaKnown RBP1.6□□□□□ -2.15
MSH5YDL154W CDC21P06785 304 aa1.6□□□□□ -2.15
MSH5YDL154W LPD1P09624 499 aaKnown RBP1.6□□□□□ -2.15
MSH5YDL154W AMD1P15274 810 aaKnown RBP1.6□□□□□ -2.15
MSH5YDL154W SIN4P32259 974 aa1.6□□□□□ -2.15
MSH5YDL154W GLC7P32598 312 aaKnown RBP1.6□□□□□ -2.15
MSH5YDL154W HEL1P36113 551 aa1.6□□□□□ -2.15
MSH5YDL154W ATP3P38077 311 aaKnown RBP1.6□□□□□ -2.15
MSH5YDL154W GDT1P38301 280 aaPredicted RBP1.6□□□□□ -2.15
MSH5YDL154W YBP1P38315 674 aa1.6□□□□□ -2.15
MSH5YDL154W MTC4P38335 694 aaKnown RBP1.6□□□□□ -2.15
MSH5YDL154W MDM31P38880 579 aa1.6□□□□□ -2.15
MSH5YDL154W YJL070CP40361 888 aa1.6□□□□□ -2.15
MSH5YDL154W AVT4P50944 713 aa1.6□□□□□ -2.15
MSH5YDL154W YGL260WP53056 76 aa1.6□□□□□ -2.15
MSH5YDL154W CAF40P53829 373 aa1.6□□□□□ -2.15
MSH5YDL154W WSC2P53832 503 aa1.6□□□□□ -2.15
MSH5YDL154W ALF1P53904 254 aa1.6□□□□□ -2.15
MSH5YDL154W EOS1P53938 366 aa1.6□□□□□ -2.15
MSH5YDL154W YPL068CQ02749 293 aa1.6□□□□□ -2.15
MSH5YDL154W PPM1Q04081 328 aa1.6□□□□□ -2.15
MSH5YDL154W GDH1P07262 454 aaKnown RBP1.59□□□□□ -2.15
MSH5YDL154W DST1P07273 309 aa1.59□□□□□ -2.15
MSH5YDL154W MRP4P32902 394 aa1.59□□□□□ -2.15
MSH5YDL154W SWH1P35845 1188 aa1.59□□□□□ -2.15
MSH5YDL154W NAT2P37293 288 aa1.59□□□□□ -2.15
MSH5YDL154W KAP104P38217 918 aaKnown RBP1.59□□□□□ -2.15
MSH5YDL154W RRP4P38792 359 aaKnown RBP1.59□□□□□ -2.15
MSH5YDL154W RTT107P38850 1070 aa1.59□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms