RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	IMA4	P0CW41	589 aa		1.14	□□□□□ -2.23
HMRA2	YCR096C	CKA1	P15790	372 aa		1.14	□□□□□ -2.23
HMRA2	YCR096C	KRE2	P27809	442 aa		1.14	□□□□□ -2.23
HMRA2	YCR096C	SMY1	P32364	656 aa	Known RBP	1.14	□□□□□ -2.23
HMRA2	YCR096C	APE3	P37302	537 aa	Known RBP	1.14	□□□□□ -2.23
HMRA2	YCR096C	IRC6	P43615	237 aa		1.14	□□□□□ -2.23
HMRA2	YCR096C	DLD2	P46681	530 aa	Known RBP	1.14	□□□□□ -2.23
HMRA2	YCR096C	YJR011C	P47086	261 aa	Predicted RBP	1.14	□□□□□ -2.23
HMRA2	YCR096C	MNP1	P53163	194 aa	Predicted RBP	1.14	□□□□□ -2.23
HMRA2	YCR096C	IMA2	Q08295	589 aa		1.14	□□□□□ -2.23
HMRA2	YCR096C	SGT1	Q08446	395 aa		1.14	□□□□□ -2.23
HMRA2	YCR096C	SKI7	Q08491	747 aa	Predicted RBP	1.14	□□□□□ -2.23
HMRA2	YCR096C	BUD21	Q08492	214 aa	Predicted RBP	1.14	□□□□□ -2.23
HMRA2	YCR096C	PLP2	Q12017	286 aa		1.14	□□□□□ -2.23
HMRA2	YCR096C	VAM3	Q12241	283 aa		1.14	□□□□□ -2.23
HMRA2	YCR096C	RTN2	Q12443	393 aa		1.14	□□□□□ -2.23
HMRA2	YCR096C	ISN1	Q99312	450 aa		1.14	□□□□□ -2.23
HMRA2	YCR096C	TY1B-A	O13527	1196 aa	Known RBP	1.13	□□□□□ -2.23
HMRA2	YCR096C	ERG3	P32353	365 aa		1.13	□□□□□ -2.23
HMRA2	YCR096C	DPH5	P32469	300 aa	Predicted RBP	1.13	□□□□□ -2.23
HMRA2	YCR096C	RTC2	P38279	296 aa		1.13	□□□□□ -2.23
HMRA2	YCR096C	YAL037W	P39728	267 aa		1.13	□□□□□ -2.23
HMRA2	YCR096C	NDE1	P40215	560 aa		1.13	□□□□□ -2.23
HMRA2	YCR096C	ARF3	P40994	183 aa	RIP-Chip data	1.13	□□□□□ -2.23	not detected
HMRA2	YCR096C	EGT2	P42835	1041 aa		1.13	□□□□□ -2.23
HMRA2	YCR096C	PHO86	P46956	311 aa		1.13	□□□□□ -2.23
HMRA2	YCR096C	MDE1	P47095	244 aa		1.13	□□□□□ -2.23
HMRA2	YCR096C	BNS1	P50084	137 aa		1.13	□□□□□ -2.23
HMRA2	YCR096C	ATP22	P50273	684 aa	Predicted RBP	1.13	□□□□□ -2.23
HMRA2	YCR096C	YGR018C	P53211	109 aa		1.13	□□□□□ -2.23
HMRA2	YCR096C	MRPL19	P53875	158 aa		1.13	□□□□□ -2.23
HMRA2	YCR096C	GIR2	Q03768	265 aa	Predicted RBP	1.13	□□□□□ -2.23
HMRA2	YCR096C	MFG1	Q07684	458 aa		1.13	□□□□□ -2.23
HMRA2	YCR096C	RKM1	Q08961	583 aa	Predicted RBP	1.13	□□□□□ -2.23
HMRA2	YCR096C	SMF3	Q12078	473 aa	Predicted RBP	1.13	□□□□□ -2.23
HMRA2	YCR096C	ADH1	P00330	348 aa	Known RBP	1.12	□□□□□ -2.23
HMRA2	YCR096C	COX3	P00420	269 aa		1.12	□□□□□ -2.23
HMRA2	YCR096C	MAS2	P11914	482 aa		1.12	□□□□□ -2.23
HMRA2	YCR096C	CLN1	P20437	546 aa		1.12	□□□□□ -2.23
HMRA2	YCR096C	PTI1	P39927	425 aa	Predicted RBP	1.12	□□□□□ -2.23
HMRA2	YCR096C	OXA1	P39952	402 aa		1.12	□□□□□ -2.23
HMRA2	YCR096C	GPD2	P41911	440 aa	Known RBP	1.12	□□□□□ -2.23
HMRA2	YCR096C	SFH5	P47008	294 aa		1.12	□□□□□ -2.23
HMRA2	YCR096C	BIR1	P47134	954 aa		1.12	□□□□□ -2.23
HMRA2	YCR096C	MRM2	P53123	320 aa		1.12	□□□□□ -2.23
HMRA2	YCR096C	YGR250C	P53316	781 aa	Known RBP	1.12	□□□□□ -2.23
HMRA2	YCR096C	COS1	P53822	381 aa		1.12	□□□□□ -2.23
HMRA2	YCR096C	OCA2	P53949	197 aa		1.12	□□□□□ -2.23
HMRA2	YCR096C	TAF11	Q04226	346 aa		1.12	□□□□□ -2.23
HMRA2	YCR096C	RIF2	Q06208	395 aa		1.12	□□□□□ -2.23
HMRA2	YCR096C	VTA1	Q06263	330 aa		1.12	□□□□□ -2.23
HMRA2	YCR096C	DIS3	Q08162	1001 aa	Known RBP	1.12	□□□□□ -2.23
HMRA2	YCR096C	REX4	Q08237	289 aa		1.12	□□□□□ -2.23
HMRA2	YCR096C	SCEI	P03882	235 aa		1.11	□□□□□ -2.23
HMRA2	YCR096C	COX4	P04037	155 aa		1.11	□□□□□ -2.23
HMRA2	YCR096C	MRP7	P12687	371 aa		1.11	□□□□□ -2.23
HMRA2	YCR096C	MSI1	P13712	422 aa		1.11	□□□□□ -2.23
HMRA2	YCR096C	RED1	P14291	827 aa		1.11	□□□□□ -2.23
HMRA2	YCR096C	SPO7	P18410	259 aa		1.11	□□□□□ -2.23
HMRA2	YCR096C	AAT2	P23542	418 aa	Known RBP	1.11	□□□□□ -2.23
HMRA2	YCR096C	YCL068C	P25593	260 aa		1.11	□□□□□ -2.23
HMRA2	YCR096C	PHA2	P32452	334 aa		1.11	□□□□□ -2.23
HMRA2	YCR096C	YME2	P32843	850 aa		1.11	□□□□□ -2.23
HMRA2	YCR096C	OTU2	P38747	307 aa	Known RBP	1.11	□□□□□ -2.23
HMRA2	YCR096C	PCF11	P39081	626 aa	Predicted RBP	1.11	□□□□□ -2.23
HMRA2	YCR096C	YIL029C	P40538	142 aa		1.11	□□□□□ -2.23
HMRA2	YCR096C	LCB3	P47013	409 aa		1.11	□□□□□ -2.23
HMRA2	YCR096C	FMS1	P50264	508 aa		1.11	□□□□□ -2.23
HMRA2	YCR096C	MTQ1	P53944	314 aa		1.11	□□□□□ -2.23
HMRA2	YCR096C	TDA1	Q03533	586 aa		1.11	□□□□□ -2.23
HMRA2	YCR096C	CCE1	Q03702	353 aa		1.11	□□□□□ -2.23
HMRA2	YCR096C	TAF12	Q03761	539 aa		1.11	□□□□□ -2.23
HMRA2	YCR096C	RRP45	Q05636	305 aa	Known RBP	1.11	□□□□□ -2.23
HMRA2	YCR096C	DNL4	Q08387	944 aa	Predicted RBP	1.11	□□□□□ -2.23
HMRA2	YCR096C	YRF1-4	O13559	1382 aa		1.1	□□□□□ -2.23
HMRA2	YCR096C	URA4	P20051	364 aa		1.1	□□□□□ -2.23
HMRA2	YCR096C	RRN10	P38204	145 aa		1.1	□□□□□ -2.23
HMRA2	YCR096C	STP2	P38704	541 aa		1.1	□□□□□ -2.23
HMRA2	YCR096C	YHK8	P38776	514 aa		1.1	□□□□□ -2.23
HMRA2	YCR096C	UTP9	P38882	575 aa	Known RBP	1.1	□□□□□ -2.23
HMRA2	YCR096C	ATG18	P43601	500 aa		1.1	□□□□□ -2.23
HMRA2	YCR096C	COS5	P47187	383 aa		1.1	□□□□□ -2.23
HMRA2	YCR096C	YGL138C	P53122	345 aa		1.1	□□□□□ -2.23
HMRA2	YCR096C	BNI5	P53890	448 aa	Known RBP	1.1	□□□□□ -2.23
HMRA2	YCR096C	HOT1	Q03213	719 aa		1.1	□□□□□ -2.23
HMRA2	YCR096C	YET2	Q04210	160 aa		1.1	□□□□□ -2.23
HMRA2	YCR096C	COS7	Q07788	383 aa		1.1	□□□□□ -2.23
HMRA2	YCR096C	RAX1	Q08760	435 aa		1.1	□□□□□ -2.23
HMRA2	YCR096C	BEM2	P39960	2167 aa	Known RBP	1.09	□□□□□ -2.23
HMRA2	YCR096C	CAP2	P13517	287 aa		1.09	□□□□□ -2.23
HMRA2	YCR096C	EXG1	P23776	448 aa	Known RBP	1.09	□□□□□ -2.23
HMRA2	YCR096C	CLB3	P24870	427 aa		1.09	□□□□□ -2.23
HMRA2	YCR096C	CYS4	P32582	507 aa	Known RBP	1.09	□□□□□ -2.23
HMRA2	YCR096C	ANR2	P36090	516 aa	Predicted RBP	1.09	□□□□□ -2.23
HMRA2	YCR096C	HEL1	P36113	551 aa		1.09	□□□□□ -2.23
HMRA2	YCR096C	YBR056W	P38081	501 aa		1.09	□□□□□ -2.23
HMRA2	YCR096C	COX14	P39103	70 aa		1.09	□□□□□ -2.23
HMRA2	YCR096C	ALD5	P40047	520 aa	Known RBP	1.09	□□□□□ -2.23
HMRA2	YCR096C	YFR057W	P43625	151 aa		1.09	□□□□□ -2.23
HMRA2	YCR096C	MST27	P53176	234 aa		1.09	□□□□□ -2.23

Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms