RNA–Protein interactions for RNA: YAL018C

LDS1, Transcript of Protein Involved in spore wall assembly, yeast

Gene LDS1, Length 978 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDS1	YAL018C	RRP40	Q08285	240 aa	Known RBP	5.78	□□□□□ -1.48
LDS1	YAL018C	MLH3	Q12083	715 aa		5.78	□□□□□ -1.48
LDS1	YAL018C	YVC1	Q12324	675 aa		5.78	□□□□□ -1.48
LDS1	YAL018C	SNF8	Q12483	233 aa		5.78	□□□□□ -1.48
LDS1	YAL018C	TY4A-H	Q6Q5P6	413 aa		5.78	□□□□□ -1.48
LDS1	YAL018C	FMP27	Q06179	2628 aa		5.78	□□□□□ -1.48
LDS1	YAL018C	RPL1A	P0CX43	217 aa	Known RBP	5.77	□□□□□ -1.49
LDS1	YAL018C	RPL1B	P0CX44	217 aa	Known RBP	5.77	□□□□□ -1.49
LDS1	YAL018C	SNF5	P18480	905 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	PRP2	P20095	876 aa	Predicted RBP	5.77	□□□□□ -1.49
LDS1	YAL018C	MGR1	P25573	417 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	PRO1	P32264	428 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	ISC10	P32645	267 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	DOA1	P36037	715 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	UTH1	P36135	365 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	OMA1	P36163	345 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	MNN2	P38069	597 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	SCO2	P38072	301 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	YRO2	P38079	344 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	YHR218W	P38899	603 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	FAA3	P39002	694 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	RIC1	P40395	1056 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	NEO1	P40527	1151 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	5.77	□□□□□ -1.49	not detected
LDS1	YAL018C	FMP33	P46998	180 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	RAD17	P48581	401 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	BIO3	P50277	480 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	ROG1	P53118	685 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	YGR012W	P53206	393 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	YNL095C	P53932	642 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	NAN1	Q02931	896 aa	Known RBP	5.77	□□□□□ -1.49
LDS1	YAL018C	PEX12	Q04370	399 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	RRP45	Q05636	305 aa	Known RBP	5.77	□□□□□ -1.49
LDS1	YAL018C	NDL1	Q06568	189 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	PUN1	Q06991	263 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	YLR030W	Q07967	263 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	YPR022C	Q12139	1133 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	RKM5	Q12367	367 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	SKM1	Q12469	655 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	YPR064W	Q12492	139 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	MDM12	Q92328	271 aa		5.77	□□□□□ -1.49
LDS1	YAL018C	GAL3	P13045	520 aa		5.76	□□□□□ -1.49
LDS1	YAL018C	DAP2	P18962	818 aa		5.76	□□□□□ -1.49
LDS1	YAL018C	HOP1	P20050	605 aa		5.76	□□□□□ -1.49
LDS1	YAL018C	CMK2	P22517	447 aa		5.76	□□□□□ -1.49
LDS1	YAL018C	AGP1	P25376	633 aa		5.76	□□□□□ -1.49
LDS1	YAL018C	YCL049C	P25577	312 aa		5.76	□□□□□ -1.49
LDS1	YAL018C	CMK1	P27466	446 aa	Known RBP	5.76	□□□□□ -1.49
LDS1	YAL018C	IDH2	P28241	369 aa	Known RBP	5.76	□□□□□ -1.49
LDS1	YAL018C	YJU2	P28320	278 aa	Predicted RBP	5.76	□□□□□ -1.49
LDS1	YAL018C	SUI1	P32911	108 aa	Known RBP	5.76	□□□□□ -1.49
LDS1	YAL018C	PEX6	P33760	1030 aa		5.76	□□□□□ -1.49
LDS1	YAL018C	BNA4	P38169	460 aa		5.76	□□□□□ -1.49
LDS1	YAL018C	RCK1	P38622	512 aa		5.76	□□□□□ -1.49
LDS1	YAL018C	MNL1	P38888	796 aa		5.76	□□□□□ -1.49
LDS1	YAL018C	PRP39	P39682	629 aa	Known RBP	5.76	□□□□□ -1.49
LDS1	YAL018C	RBG1	P39729	369 aa		5.76	□□□□□ -1.49
LDS1	YAL018C	RSP5	P39940	809 aa	Known RBP	5.76	□□□□□ -1.49
LDS1	YAL018C	YJL043W	P47053	257 aa		5.76	□□□□□ -1.49
LDS1	YAL018C	NOP9	P47077	666 aa	Known RBP	5.76	□□□□□ -1.49
LDS1	YAL018C	YGR016W	P53209	190 aa		5.76	□□□□□ -1.49
LDS1	YAL018C	ATP25	Q03153	612 aa		5.76	□□□□□ -1.49
LDS1	YAL018C	STP3	Q05937	343 aa		5.76	□□□□□ -1.49
LDS1	YAL018C	THP1	Q08231	455 aa		5.76	□□□□□ -1.49
LDS1	YAL018C	YOL159C	Q08300	171 aa		5.76	□□□□□ -1.49
LDS1	YAL018C	TAF3	Q12297	353 aa		5.76	□□□□□ -1.49
LDS1	YAL018C	NSI1	Q12457	570 aa		5.76	□□□□□ -1.49
LDS1	YAL018C	UBR1	P19812	1950 aa		5.76	□□□□□ -1.49
LDS1	YAL018C	CAN1	P04817	590 aa		5.75	□□□□□ -1.49
LDS1	YAL018C	COR1	P07256	457 aa		5.75	□□□□□ -1.49
LDS1	YAL018C	URA4	P20051	364 aa		5.75	□□□□□ -1.49
LDS1	YAL018C	DMC1	P25453	334 aa		5.75	□□□□□ -1.49
LDS1	YAL018C	PEX3	P28795	441 aa		5.75	□□□□□ -1.49
LDS1	YAL018C	DPH5	P32469	300 aa	Predicted RBP	5.75	□□□□□ -1.49
LDS1	YAL018C	RPT5	P33297	434 aa	Known RBP	5.75	□□□□□ -1.49
LDS1	YAL018C	TAF14	P35189	244 aa		5.75	□□□□□ -1.49
LDS1	YAL018C	SKG1	P36169	355 aa		5.75	□□□□□ -1.49
LDS1	YAL018C	PDX3	P38075	228 aa	Known RBP	5.75	□□□□□ -1.49
LDS1	YAL018C	ATG14	P38270	344 aa		5.75	□□□□□ -1.49
LDS1	YAL018C	ECM1	P39715	212 aa		5.75	□□□□□ -1.49
LDS1	YAL018C	MTW1	P39731	289 aa		5.75	□□□□□ -1.49
LDS1	YAL018C	ECM10	P39987	644 aa		5.75	□□□□□ -1.49
LDS1	YAL018C	PAC10	P48363	199 aa		5.75	□□□□□ -1.49
LDS1	YAL018C	VMA10	P48836	114 aa	Known RBP	5.75	□□□□□ -1.49
LDS1	YAL018C	SED5	Q01590	340 aa		5.75	□□□□□ -1.49
LDS1	YAL018C	OAZ1	Q02803	292 aa		5.75	□□□□□ -1.49
LDS1	YAL018C	SIZ1	Q04195	904 aa		5.75	□□□□□ -1.49
LDS1	YAL018C	APC4	Q04601	652 aa		5.75	□□□□□ -1.49
LDS1	YAL018C	GIC2	Q06648	383 aa		5.75	□□□□□ -1.49
LDS1	YAL018C	TEN1	Q07921	160 aa		5.75	□□□□□ -1.49
LDS1	YAL018C	RRT8	Q08219	342 aa		5.75	□□□□□ -1.49
LDS1	YAL018C	MHF2	Q3E829	80 aa		5.75	□□□□□ -1.49
LDS1	YAL018C	RAD7	P06779	565 aa		5.74	□□□□□ -1.49
LDS1	YAL018C	ALG7	P07286	448 aa		5.74	□□□□□ -1.49
LDS1	YAL018C	DBP3	P20447	523 aa	Known RBP	5.74	□□□□□ -1.49
LDS1	YAL018C	NPR1	P22211	790 aa		5.74	□□□□□ -1.49
LDS1	YAL018C	CLB4	P24871	460 aa		5.74	□□□□□ -1.49
LDS1	YAL018C	SPB1	P25582	841 aa	Predicted RBP	5.74	□□□□□ -1.49
LDS1	YAL018C	IMG1	P25626	169 aa		5.74	□□□□□ -1.49
LDS1	YAL018C	YMC1	P32331	307 aa		5.74	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms