RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 AVL9Q12500 764 aa-0.66□□□□□ -2.52
snR47snR47 RAD5P32849 1169 aaPredicted RBP-0.67□□□□□ -2.52
snR47snR47 PEX22P39718 180 aa-0.67□□□□□ -2.52
snR47snR47 RBG1P39729 369 aa-0.67□□□□□ -2.52
snR47snR47 SLZ1P40167 298 aa-0.67□□□□□ -2.52
snR47snR47 AIM22P47051 409 aa-0.67□□□□□ -2.52
snR47snR47 SHE4P51534 789 aa-0.67□□□□□ -2.52
snR47snR47 REG1Q00816 1014 aa-0.67□□□□□ -2.52
snR47snR47 TOF2Q02208 771 aa-0.67□□□□□ -2.52
snR47snR47 SOV1Q04748 898 aa-0.67□□□□□ -2.52
snR47snR47 MFG1Q07684 458 aa-0.67□□□□□ -2.52
snR47snR47 YLL032CQ07834 825 aaKnown RBP RIP-Chip data-0.67□□□□□ -2.52not detected
snR47snR47 RLP24Q07915 199 aaKnown RBP-0.67□□□□□ -2.52
snR47snR47 NUS1Q12063 375 aa-0.67□□□□□ -2.52
snR47snR47 TPK1P06244 397 aa-0.68□□□□□ -2.52
snR47snR47 SMP1P38128 452 aa-0.68□□□□□ -2.52
snR47snR47 SBE22P38814 852 aa-0.68□□□□□ -2.52
snR47snR47 YIL029CP40538 142 aa-0.68□□□□□ -2.52
snR47snR47 CLD1P53264 445 aa-0.68□□□□□ -2.52
snR47snR47 COG6P53959 839 aa-0.68□□□□□ -2.52
snR47snR47 YMR155WQ03795 547 aa-0.68□□□□□ -2.52
snR47snR47 SYF1Q04048 859 aaPredicted RBP-0.68□□□□□ -2.52
snR47snR47 BUD22Q04347 519 aaKnown RBP-0.68□□□□□ -2.52
snR47snR47 MFB1Q04922 465 aa-0.68□□□□□ -2.52
snR47snR47 COQ9Q05779 260 aa-0.68□□□□□ -2.52
snR47snR47 RLM1Q12224 676 aa-0.68□□□□□ -2.52
snR47snR47 YAK1P14680 807 aa-0.69□□□□□ -2.52
snR47snR47 PRP2P20095 876 aaPredicted RBP-0.69□□□□□ -2.52
snR47snR47 RAD57P25301 460 aa-0.69□□□□□ -2.52
snR47snR47 PDC2P32896 925 aa-0.69□□□□□ -2.52
snR47snR47 SKG6P32900 734 aaPredicted RBP-0.69□□□□□ -2.52
snR47snR47 TFC4P33339 1025 aa-0.69□□□□□ -2.52
snR47snR47 YBR144CP34215 104 aa-0.69□□□□□ -2.52
snR47snR47 FAF1P40546 346 aaPredicted RBP-0.69□□□□□ -2.52
snR47snR47 VMS1Q04311 632 aaKnown RBP-0.69□□□□□ -2.52
snR47snR47 PEX30Q06169 523 aa-0.69□□□□□ -2.52
snR47snR47 YPL272CQ08984 517 aa-0.69□□□□□ -2.52
snR47snR47 ARG4P04076 463 aaPredicted RBP-0.7□□□□□ -2.52
snR47snR47 MET2P08465 486 aa-0.7□□□□□ -2.52
snR47snR47 HSC82P15108 705 aaKnown RBP-0.7□□□□□ -2.52
snR47snR47 FAR1P21268 830 aa-0.7□□□□□ -2.52
snR47snR47 MSP1P28737 362 aa-0.7□□□□□ -2.52
snR47snR47 SSE2P32590 693 aaKnown RBP-0.7□□□□□ -2.52
snR47snR47 COX13P32799 129 aa-0.7□□□□□ -2.52
snR47snR47 DBP7P36120 742 aaKnown RBP-0.7□□□□□ -2.52
snR47snR47 YJR008WP47085 338 aa-0.7□□□□□ -2.52
snR47snR47 AZR1P50080 613 aa-0.7□□□□□ -2.52
snR47snR47 YMR018WQ04364 514 aa-0.7□□□□□ -2.52
snR47snR47 BCH1Q05029 724 aa-0.7□□□□□ -2.52
snR47snR47 YLR345WQ06137 509 aa-0.7□□□□□ -2.52
snR47snR47 STE7P06784 515 aa-0.71□□□□□ -2.52
snR47snR47 ASP3-2P0CX77 362 aa-0.71□□□□□ -2.52
snR47snR47 ASP3-3P0CX78 362 aa-0.71□□□□□ -2.52
snR47snR47 ASP3-4P0CX79 362 aa-0.71□□□□□ -2.52
snR47snR47 ASP3-1P0CZ17 362 aa-0.71□□□□□ -2.52
snR47snR47 KRE1P17260 313 aa-0.71□□□□□ -2.52
snR47snR47 RSA4P25382 515 aaKnown RBP-0.71□□□□□ -2.52
snR47snR47 PHA2P32452 334 aa-0.71□□□□□ -2.52
snR47snR47 MRPL36P36531 177 aa-0.71□□□□□ -2.52
snR47snR47 ERP2P39704 215 aa-0.71□□□□□ -2.52
snR47snR47 YMR147WP40218 223 aaKnown RBP-0.71□□□□□ -2.52
snR47snR47 YJR142WP47173 342 aa-0.71□□□□□ -2.52
snR47snR47 NOP7P53261 605 aaKnown RBP-0.71□□□□□ -2.52
snR47snR47 FRE4P53746 719 aa-0.71□□□□□ -2.52
snR47snR47 TFC6Q06339 672 aa-0.71□□□□□ -2.52
snR47snR47 MF(ALPHA)1P01149 165 aa-0.72□□□□□ -2.52
snR47snR47 HPR1P17629 752 aaKnown RBP-0.72□□□□□ -2.52
snR47snR47 CMK2P22517 447 aa-0.72□□□□□ -2.52
snR47snR47 SMC2P38989 1170 aaKnown RBP-0.72□□□□□ -2.52
snR47snR47 POP1P41812 875 aa-0.72□□□□□ -2.52
snR47snR47 YCH1P42937 148 aa-0.72□□□□□ -2.52
snR47snR47 DAN1P47178 298 aa-0.72□□□□□ -2.52
snR47snR47 SEH1P53011 349 aaKnown RBP-0.72□□□□□ -2.52
snR47snR47 VEL1P53058 206 aa-0.72□□□□□ -2.52
snR47snR47 MRM2P53123 320 aa-0.72□□□□□ -2.52
snR47snR47 IOC4Q04213 475 aa-0.72□□□□□ -2.52
snR47snR47 UBX2Q04228 584 aa-0.72□□□□□ -2.52
snR47snR47 RCO1Q04779 684 aa-0.72□□□□□ -2.52
snR47snR47 SGT1Q08446 395 aa-0.72□□□□□ -2.52
snR47snR47 RIM20Q12033 661 aa-0.72□□□□□ -2.52
snR47snR47 COR1P07256 457 aa-0.73□□□□□ -2.53
snR47snR47 SST2P11972 698 aaKnown RBP-0.73□□□□□ -2.53
snR47snR47 PHO80P20052 293 aa-0.73□□□□□ -2.53
snR47snR47 ALY1P36117 915 aa-0.73□□□□□ -2.53
snR47snR47 CBP4P37267 147 aa-0.73□□□□□ -2.53
snR47snR47 MBB1P39534 108 aa-0.73□□□□□ -2.53
snR47snR47 HAC1P41546 238 aa-0.73□□□□□ -2.53
snR47snR47 UFE1P41834 346 aa-0.73□□□□□ -2.53
snR47snR47 TRM44Q02648 567 aaKnown RBP-0.73□□□□□ -2.53
snR47snR47 YPL080CQ02826 108 aa-0.73□□□□□ -2.53
snR47snR47 ASA1Q06822 443 aa-0.73□□□□□ -2.53
snR47snR47 RMD5Q12508 421 aa-0.73□□□□□ -2.53
snR47snR47 PRP8P33334 2413 aaKnown RBP-0.74□□□□□ -2.53
snR47snR47 ARD1P07347 238 aaPredicted RBP-0.74□□□□□ -2.53
snR47snR47 CUP2P15315 225 aa-0.74□□□□□ -2.53
snR47snR47 EPT1P22140 391 aa-0.74□□□□□ -2.53
snR47snR47 PAP1P29468 568 aaKnown RBP-0.74□□□□□ -2.53
snR47snR47 SIN4P32259 974 aa-0.74□□□□□ -2.53
snR47snR47 MMS21P38632 267 aa-0.74□□□□□ -2.53
snR47snR47 YHK8P38776 514 aa-0.74□□□□□ -2.53
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms