RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W TPK2P06245 380 aa1.62□□□□□ -2.15
CTF4YPR135W CLB3P24870 427 aa1.62□□□□□ -2.15
CTF4YPR135W YSP3P25036 478 aa1.62□□□□□ -2.15
CTF4YPR135W SPC110P32380 944 aa1.62□□□□□ -2.15
CTF4YPR135W IME2P32581 645 aa1.62□□□□□ -2.15
CTF4YPR135W YEL043WP32618 956 aa1.62□□□□□ -2.15
CTF4YPR135W YME1P32795 747 aa1.62□□□□□ -2.15
CTF4YPR135W RPT5P33297 434 aaKnown RBP1.62□□□□□ -2.15
CTF4YPR135W EBP2P36049 427 aaKnown RBP1.62□□□□□ -2.15
CTF4YPR135W AGP2P38090 596 aa1.62□□□□□ -2.15
CTF4YPR135W CTP1P38152 299 aa1.62□□□□□ -2.15
CTF4YPR135W UFE1P41834 346 aa1.62□□□□□ -2.15
CTF4YPR135W MPS3P47069 682 aa1.62□□□□□ -2.15
CTF4YPR135W PDR16P53860 351 aaKnown RBP1.62□□□□□ -2.15
CTF4YPR135W FUS2Q05670 677 aa1.62□□□□□ -2.15
CTF4YPR135W SMD2Q06217 110 aaKnown RBP1.62□□□□□ -2.15
CTF4YPR135W NOP6Q07623 225 aaKnown RBP1.62□□□□□ -2.15
CTF4YPR135W MLH2Q07980 695 aa1.62□□□□□ -2.15
CTF4YPR135W CRT10Q08226 957 aa1.62□□□□□ -2.15
CTF4YPR135W NDD1Q08887 554 aa1.62□□□□□ -2.15
CTF4YPR135W RIM20Q12033 661 aa1.62□□□□□ -2.15
CTF4YPR135W PER33Q12144 273 aa1.62□□□□□ -2.15
CTF4YPR135W NBP2Q12163 236 aa1.62□□□□□ -2.15
CTF4YPR135W YJR112W-AQ3E743 109 aa1.62□□□□□ -2.15
CTF4YPR135W ARD1P07347 238 aaPredicted RBP1.62□□□□□ -2.15
CTF4YPR135W PET123P17558 318 aa1.62□□□□□ -2.15
CTF4YPR135W KGD1P20967 1014 aaKnown RBP1.62□□□□□ -2.15
CTF4YPR135W MSP1P28737 362 aa1.62□□□□□ -2.15
CTF4YPR135W CRM1P30822 1084 aaKnown RBP1.62□□□□□ -2.15
CTF4YPR135W HXT3P32466 567 aaKnown RBP1.62□□□□□ -2.15
CTF4YPR135W NIP1P32497 812 aaKnown RBP1.62□□□□□ -2.15
CTF4YPR135W PMT1P33775 817 aa1.62□□□□□ -2.15
CTF4YPR135W TAF14P35189 244 aa1.62□□□□□ -2.15
CTF4YPR135W RRT2P38332 387 aa1.62□□□□□ -2.15
CTF4YPR135W LRO1P40345 661 aa1.62□□□□□ -2.15
CTF4YPR135W LAS21P40367 830 aa1.62□□□□□ -2.15
CTF4YPR135W CTK2P46962 323 aa1.62□□□□□ -2.15
CTF4YPR135W YGL138CP53122 345 aa1.62□□□□□ -2.15
CTF4YPR135W RPN14P53196 417 aa1.62□□□□□ -2.15
CTF4YPR135W OGG1P53397 376 aaPredicted RBP1.62□□□□□ -2.15
CTF4YPR135W EOS1P53938 366 aa1.62□□□□□ -2.15
CTF4YPR135W GLO2Q05584 274 aa1.62□□□□□ -2.15
CTF4YPR135W MDY2Q12285 212 aa1.62□□□□□ -2.15
CTF4YPR135W OM45P16547 393 aa1.61□□□□□ -2.15
CTF4YPR135W SPB1P25582 841 aaPredicted RBP1.61□□□□□ -2.15
CTF4YPR135W YCR061WP25639 631 aa1.61□□□□□ -2.15
CTF4YPR135W TIF3P34167 436 aaKnown RBP1.61□□□□□ -2.15
CTF4YPR135W SWH1P35845 1188 aa1.61□□□□□ -2.15
CTF4YPR135W ARO9P38840 513 aaPredicted RBP1.61□□□□□ -2.15
CTF4YPR135W IME4P41833 600 aa1.61□□□□□ -2.15
CTF4YPR135W PMT6P42934 759 aa1.61□□□□□ -2.15
CTF4YPR135W SWP82P43554 623 aa1.61□□□□□ -2.15
CTF4YPR135W AGX1P43567 385 aa1.61□□□□□ -2.15
CTF4YPR135W CAK1P43568 368 aaPredicted RBP1.61□□□□□ -2.15
CTF4YPR135W GUF1P46943 645 aa1.61□□□□□ -2.15
CTF4YPR135W PET130P47065 347 aa1.61□□□□□ -2.15
CTF4YPR135W ECM27P47144 725 aa1.61□□□□□ -2.15
CTF4YPR135W RFX1P48743 811 aa1.61□□□□□ -2.15
CTF4YPR135W RET3P53600 189 aa1.61□□□□□ -2.15
CTF4YPR135W KTR5P53966 522 aaPredicted RBP1.61□□□□□ -2.15
CTF4YPR135W CSM3Q04659 317 aa1.61□□□□□ -2.15
CTF4YPR135W RQC1Q05468 723 aaKnown RBP1.61□□□□□ -2.15
CTF4YPR135W ORM2Q06144 216 aa1.61□□□□□ -2.15
CTF4YPR135W APL4Q12028 832 aa1.61□□□□□ -2.15
CTF4YPR135W ATG29Q12092 213 aa1.61□□□□□ -2.15
CTF4YPR135W ERG27Q12452 347 aaKnown RBP1.61□□□□□ -2.15
CTF4YPR135W AI5_ALPHAQ9ZZX1 630 aa1.61□□□□□ -2.15
CTF4YPR135W DFR1P07807 211 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15not detected
CTF4YPR135W GRR1P24814 1151 aa1.61□□□□□ -2.15
CTF4YPR135W RRP43P25359 394 aaPredicted RBP1.61□□□□□ -2.15
CTF4YPR135W CDC15P27636 974 aa1.61□□□□□ -2.15
CTF4YPR135W SIP1P32578 815 aa1.61□□□□□ -2.15
CTF4YPR135W YSC83P32792 385 aa1.61□□□□□ -2.15
CTF4YPR135W SEC66P33754 206 aa1.61□□□□□ -2.15
CTF4YPR135W DAD2P36162 133 aa1.61□□□□□ -2.15
CTF4YPR135W PXL1P36166 706 aa1.61□□□□□ -2.15
CTF4YPR135W RRP3P38712 501 aaKnown RBP1.61□□□□□ -2.15
CTF4YPR135W SMC3P47037 1230 aa1.61□□□□□ -2.15
CTF4YPR135W USA1Q03714 838 aa1.61□□□□□ -2.15
CTF4YPR135W TSR1Q07381 788 aaKnown RBP1.61□□□□□ -2.15
CTF4YPR135W LUC7Q07508 261 aaPredicted RBP1.61□□□□□ -2.15
CTF4YPR135W YOL159CQ08300 171 aa1.61□□□□□ -2.15
CTF4YPR135W TCO89Q08921 799 aa1.61□□□□□ -2.15
CTF4YPR135W RKI1Q12189 258 aa1.61□□□□□ -2.15
CTF4YPR135W RLM1Q12224 676 aa1.61□□□□□ -2.15
CTF4YPR135W SFG1Q12507 346 aa1.61□□□□□ -2.15
CTF4YPR135W CHS1P08004 1131 aa1.6□□□□□ -2.15
CTF4YPR135W EST1P17214 699 aaPredicted RBP1.6□□□□□ -2.15
CTF4YPR135W YCR006CP25350 157 aa1.6□□□□□ -2.15
CTF4YPR135W RAD51P25454 400 aa1.6□□□□□ -2.15
CTF4YPR135W LRE1P25579 583 aaKnown RBP1.6□□□□□ -2.15
CTF4YPR135W RFA2P26754 273 aaKnown RBP1.6□□□□□ -2.15
CTF4YPR135W FRE1P32791 686 aa1.6□□□□□ -2.15
CTF4YPR135W VPS17P32913 551 aa1.6□□□□□ -2.15
CTF4YPR135W SOL2P37262 315 aa1.6□□□□□ -2.15
CTF4YPR135W HSM3P38348 480 aa1.6□□□□□ -2.15
CTF4YPR135W MLH1P38920 769 aa1.6□□□□□ -2.15
CTF4YPR135W YDR089WP38966 869 aa1.6□□□□□ -2.15
CTF4YPR135W EFM3P47163 339 aa1.6□□□□□ -2.15
CTF4YPR135W RAD17P48581 401 aa1.6□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms