RNA–Protein interactions for RNA: YPL246C

RBD2, Transcript of Possible rhomboid protease, yeast

Gene RBD2, Length 789 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RBD2	YPL246C	RPS5	P26783	225 aa	Known RBP	5.5	□□□□□ -1.53
RBD2	YPL246C	BRF1	P29056	596 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	APE2	P32454	952 aa	Known RBP	5.5	□□□□□ -1.53
RBD2	YPL246C	CDC5	P32562	705 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	VPH1	P32563	840 aa	Known RBP	5.5	□□□□□ -1.53
RBD2	YPL246C	YKL100C	P34248	587 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	SPC34	P36131	295 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	RIB1	P38066	345 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	RBG1	P39729	369 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	AYR1	P40471	297 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	MSS2	P40990	351 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	ARF3	P40994	183 aa	RIP-Chip data	5.5	□□□□□ -1.53	not detected
RBD2	YPL246C	YFL052W	P43551	465 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	VPS25	P47142	202 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	MTR3	P48240	250 aa	Predicted RBP	5.5	□□□□□ -1.53
RBD2	YPL246C	RNH70	P53331	553 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	DSL1	P53847	754 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	IPI3	P53877	555 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	PNG1	Q02890	363 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	PIR1	Q03178	341 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	UGO1	Q03327	502 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	SSL1	Q04673	461 aa	Predicted RBP	5.5	□□□□□ -1.53
RBD2	YPL246C	YLR224W	Q05947	369 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	ORM2	Q06144	216 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	BSP1	Q06604	576 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	SWA2	Q06677	668 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	YDL114W	Q07530	308 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	HBT1	Q07653	1046 aa	Known RBP	5.5	□□□□□ -1.53
RBD2	YPL246C	YLR012C	Q07927	99 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	NDD1	Q08887	554 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	YOR389W	Q08912	624 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	YLR046C	Q12253	270 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	PST1	Q12355	444 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	GPR1	Q12361	961 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	PEX11	Q12462	236 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	YPL119C-A	Q3E751	87 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	YOL159C-A	Q3E769	90 aa		5.5	□□□□□ -1.53
RBD2	YPL246C	CDC21	P06785	304 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	MSF1	P08425	469 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	MRP13	P12686	339 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	KSS1	P14681	368 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	UBA1	P22515	1024 aa	Known RBP	5.49	□□□□□ -1.53
RBD2	YPL246C	PGS1	P25578	521 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	SSE2	P32590	693 aa	Known RBP	5.49	□□□□□ -1.53
RBD2	YPL246C	SDH3	P33421	198 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	BET3	P36149	193 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	YPK3	P38070	525 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	FES1	P38260	290 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	SSZ1	P38788	538 aa	Known RBP	5.49	□□□□□ -1.53
RBD2	YPL246C	PCF11	P39081	626 aa	Predicted RBP	5.49	□□□□□ -1.53
RBD2	YPL246C	YEL020C	P39994	560 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	KRE29	P40026	464 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	THO1	P40040	218 aa	Known RBP	5.49	□□□□□ -1.53
RBD2	YPL246C	UTP18	P40362	594 aa	Predicted RBP	5.49	□□□□□ -1.53
RBD2	YPL246C	YIR016W	P40572	265 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	CHA4	P43634	648 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	GTO1	P48239	356 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	YNR068C	P53754	272 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	MPS1	P54199	764 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	SRL4	Q03085	281 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	TLG1	Q03322	224 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	ECM11	Q04110	302 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	MRI1	Q06489	411 aa	Known RBP	5.49	□□□□□ -1.53
RBD2	YPL246C	RAD34	Q06665	692 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	FMP45	Q07651	309 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	YOL131W	Q08270	108 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	YPQ1	Q12010	308 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	HER1	Q12276	1246 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	RPN6	Q12377	434 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	SNF8	Q12483	233 aa		5.49	□□□□□ -1.53
RBD2	YPL246C	RPS9A	O13516	197 aa	Known RBP	5.48	□□□□□ -1.53
RBD2	YPL246C	RAS2	P01120	322 aa	Known RBP	5.48	□□□□□ -1.53
RBD2	YPL246C	SST2	P11972	698 aa	Known RBP	5.48	□□□□□ -1.53
RBD2	YPL246C	KGD2	P19262	463 aa	Predicted RBP	5.48	□□□□□ -1.53
RBD2	YPL246C	RFA1	P22336	621 aa	Known RBP	5.48	□□□□□ -1.53
RBD2	YPL246C	PDE1	P22434	369 aa		5.48	□□□□□ -1.53
RBD2	YPL246C	MIH1	P23748	554 aa		5.48	□□□□□ -1.53
RBD2	YPL246C	GEX1	P25596	615 aa		5.48	□□□□□ -1.53
RBD2	YPL246C	VMA6	P32366	345 aa	Known RBP	5.48	□□□□□ -1.53
RBD2	YPL246C	SEC17	P32602	292 aa		5.48	□□□□□ -1.53
RBD2	YPL246C	LST4	P34239	828 aa		5.48	□□□□□ -1.53
RBD2	YPL246C	RMA1	P36001	430 aa	Known RBP	5.48	□□□□□ -1.53
RBD2	YPL246C	GEX2	P36173	615 aa		5.48	□□□□□ -1.53
RBD2	YPL246C	MRPL40	P36534	297 aa		5.48	□□□□□ -1.53
RBD2	YPL246C	SOL2	P37262	315 aa		5.48	□□□□□ -1.53
RBD2	YPL246C	KTR4	P38131	464 aa		5.48	□□□□□ -1.53
RBD2	YPL246C	PLB1	P39105	664 aa		5.48	□□□□□ -1.53
RBD2	YPL246C	IRC5	P43610	853 aa		5.48	□□□□□ -1.53
RBD2	YPL246C	GRX5	Q02784	150 aa		5.48	□□□□□ -1.53
RBD2	YPL246C	EFR3	Q03653	782 aa	Known RBP	5.48	□□□□□ -1.53
RBD2	YPL246C	APC4	Q04601	652 aa		5.48	□□□□□ -1.53
RBD2	YPL246C	RTN1	Q04947	295 aa	Known RBP	5.48	□□□□□ -1.53
RBD2	YPL246C	SSQ1	Q05931	657 aa	Predicted RBP	5.48	□□□□□ -1.53
RBD2	YPL246C	TMA10	Q06177	86 aa		5.48	□□□□□ -1.53
RBD2	YPL246C	VTA1	Q06263	330 aa		5.48	□□□□□ -1.53
RBD2	YPL246C	RSA1	Q08932	381 aa		5.48	□□□□□ -1.53
RBD2	YPL246C	MET17	P06106	444 aa		5.47	□□□□□ -1.53
RBD2	YPL246C	PUT2	P07275	575 aa		5.47	□□□□□ -1.53
RBD2	YPL246C	KAR1	P11927	433 aa		5.47	□□□□□ -1.53
RBD2	YPL246C	RHB1	P25378	209 aa		5.47	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 83 ms