RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W ITR1P30605 584 aa2.21□□□□□ -2.06
BRO1YPL084W MDL1P33310 695 aa2.21□□□□□ -2.06
BRO1YPL084W LTV1P34078 463 aa2.21□□□□□ -2.06
BRO1YPL084W HEL1P36113 551 aa2.21□□□□□ -2.06
BRO1YPL084W KRE9P39005 276 aa2.21□□□□□ -2.06
BRO1YPL084W GDI1P39958 451 aaKnown RBP2.21□□□□□ -2.06
BRO1YPL084W VHS2P40463 436 aa2.21□□□□□ -2.06
BRO1YPL084W EFM4P40516 257 aa2.21□□□□□ -2.06
BRO1YPL084W YJL055WP47044 245 aa2.21□□□□□ -2.06
BRO1YPL084W PHB2P50085 310 aa2.21□□□□□ -2.06
BRO1YPL084W GOR1P53839 350 aa2.21□□□□□ -2.06
BRO1YPL084W TIM18Q08749 192 aa2.21□□□□□ -2.06
BRO1YPL084W YLL056CQ12177 298 aa2.21□□□□□ -2.06
BRO1YPL084W RPN5Q12250 445 aaKnown RBP2.21□□□□□ -2.06
BRO1YPL084W ORT1Q12375 292 aa2.21□□□□□ -2.06
BRO1YPL084W YBR298C-AQ8TGK4 73 aa2.21□□□□□ -2.06
BRO1YPL084W ILV5P06168 395 aaKnown RBP2.2□□□□□ -2.06
BRO1YPL084W CHS1P08004 1131 aa2.2□□□□□ -2.06
BRO1YPL084W PRP16P15938 1071 aaPredicted RBP2.2□□□□□ -2.06
BRO1YPL084W RNA14P25298 677 aaKnown RBP2.2□□□□□ -2.06
BRO1YPL084W TIP1P27654 210 aaPredicted RBP2.2□□□□□ -2.06
BRO1YPL084W MRP4P32902 394 aa2.2□□□□□ -2.06
BRO1YPL084W NAT2P37293 288 aa2.2□□□□□ -2.06
BRO1YPL084W FAD1P38913 306 aa2.2□□□□□ -2.06
BRO1YPL084W LAM5P43560 674 aa2.2□□□□□ -2.06
BRO1YPL084W MRP51Q02950 344 aa2.2□□□□□ -2.06
BRO1YPL084W PKH2Q12236 1081 aaKnown RBP2.2□□□□□ -2.06
BRO1YPL084W COX3P00420 269 aa2.2□□□□□ -2.06
BRO1YPL084W TEF1P02994 458 aaKnown RBP2.2□□□□□ -2.06
BRO1YPL084W ADE4P04046 510 aaKnown RBP2.2□□□□□ -2.06
BRO1YPL084W ARG4P04076 463 aaPredicted RBP2.2□□□□□ -2.06
BRO1YPL084W CTR86P25355 563 aa2.2□□□□□ -2.06
BRO1YPL084W RIM1P32445 135 aaKnown RBP2.2□□□□□ -2.06
BRO1YPL084W SWH1P35845 1188 aa2.2□□□□□ -2.06
BRO1YPL084W PCA1P38360 1216 aa2.2□□□□□ -2.06
BRO1YPL084W MST28P39552 234 aa2.2□□□□□ -2.06
BRO1YPL084W JEM1P40358 645 aa2.2□□□□□ -2.06
BRO1YPL084W MKT1P40850 830 aaKnown RBP2.2□□□□□ -2.06
BRO1YPL084W IDP2P41939 412 aa2.2□□□□□ -2.06
BRO1YPL084W TOM22P49334 152 aa2.2□□□□□ -2.06
BRO1YPL084W YNR048WP53740 393 aa2.2□□□□□ -2.06
BRO1YPL084W BUG1Q12191 341 aa2.2□□□□□ -2.06
BRO1YPL084W PMR1P13586 950 aa2.19□□□□□ -2.06
BRO1YPL084W LSB5P25369 354 aa2.19□□□□□ -2.06
BRO1YPL084W YFL067WP43537 175 aa2.19□□□□□ -2.06
BRO1YPL084W SSN8P47821 323 aa2.19□□□□□ -2.06
BRO1YPL084W GPI15P53961 229 aa2.19□□□□□ -2.06
BRO1YPL084W BET5Q03630 159 aa2.19□□□□□ -2.06
BRO1YPL084W RCF1Q03713 159 aa2.19□□□□□ -2.06
BRO1YPL084W YLR456WQ06199 204 aa2.19□□□□□ -2.06
BRO1YPL084W SGT1Q08446 395 aa2.19□□□□□ -2.06
BRO1YPL084W RPL1AP0CX43 217 aaKnown RBP2.19□□□□□ -2.06
BRO1YPL084W RPL1BP0CX44 217 aaKnown RBP2.19□□□□□ -2.06
BRO1YPL084W SLY1P22213 666 aa2.19□□□□□ -2.06
BRO1YPL084W YUR1P26725 428 aa2.19□□□□□ -2.06
BRO1YPL084W RIB5P38145 238 aa2.19□□□□□ -2.06
BRO1YPL084W YAL037WP39728 267 aa2.19□□□□□ -2.06
BRO1YPL084W OST1P41543 476 aaKnown RBP2.19□□□□□ -2.06
BRO1YPL084W PIB2P53191 635 aa2.19□□□□□ -2.06
BRO1YPL084W MSO1P53604 210 aaKnown RBP2.19□□□□□ -2.06
BRO1YPL084W RSN1Q03516 953 aa2.19□□□□□ -2.06
BRO1YPL084W TAF12Q03761 539 aa2.19□□□□□ -2.06
BRO1YPL084W SKI7Q08491 747 aaPredicted RBP2.19□□□□□ -2.06
BRO1YPL084W HNT3Q08702 217 aa2.19□□□□□ -2.06
BRO1YPL084W THP3Q12049 470 aaKnown RBP2.19□□□□□ -2.06
BRO1YPL084W RMD5Q12508 421 aa2.19□□□□□ -2.06
BRO1YPL084W RRP7P25368 297 aaPredicted RBP2.18□□□□□ -2.06
BRO1YPL084W BLI1P35727 113 aa2.18□□□□□ -2.06
BRO1YPL084W PRP42Q03776 544 aaKnown RBP2.18□□□□□ -2.06
BRO1YPL084W YCL021W-AQ96VH3 125 aa2.18□□□□□ -2.06
BRO1YPL084W RAD61Q99359 647 aa2.18□□□□□ -2.06
BRO1YPL084W PDE2P06776 526 aa2.18□□□□□ -2.06
BRO1YPL084W PHO2P07269 559 aa2.18□□□□□ -2.06
BRO1YPL084W SPO12P17123 173 aa2.18□□□□□ -2.06
BRO1YPL084W RAD57P25301 460 aa2.18□□□□□ -2.06
BRO1YPL084W MIX23P38162 196 aa2.18□□□□□ -2.06
BRO1YPL084W RXT2P38255 430 aa2.18□□□□□ -2.06
BRO1YPL084W PCF11P39081 626 aaPredicted RBP2.18□□□□□ -2.06
BRO1YPL084W SEC28P40509 296 aaKnown RBP2.18□□□□□ -2.06
BRO1YPL084W RHO5P53879 331 aaKnown RBP2.18□□□□□ -2.06
BRO1YPL084W IBD2P53892 351 aa2.18□□□□□ -2.06
BRO1YPL084W RPN9Q04062 393 aaKnown RBP2.18□□□□□ -2.06
BRO1YPL084W SNT309Q06091 175 aaPredicted RBP2.18□□□□□ -2.06
BRO1YPL084W HSP82P02829 709 aaKnown RBP2.17□□□□□ -2.06
BRO1YPL084W HEM15P16622 393 aa2.17□□□□□ -2.06
BRO1YPL084W ALG1P16661 449 aa2.17□□□□□ -2.06
BRO1YPL084W CYS4P32582 507 aaKnown RBP2.17□□□□□ -2.06
BRO1YPL084W YBP1P38315 674 aa2.17□□□□□ -2.06
BRO1YPL084W FAA2P39518 744 aa2.17□□□□□ -2.06
BRO1YPL084W GAT2P40209 560 aa2.17□□□□□ -2.06
BRO1YPL084W HXT11P54862 567 aa2.17□□□□□ -2.06
BRO1YPL084W RTT103Q05543 409 aa2.17□□□□□ -2.06
BRO1YPL084W IMA3P0CW40 589 aa2.17□□□□□ -2.06
BRO1YPL084W IMA4P0CW41 589 aa2.17□□□□□ -2.06
BRO1YPL084W NIP1P32497 812 aaKnown RBP2.17□□□□□ -2.06
BRO1YPL084W SWI3P32591 825 aa2.17□□□□□ -2.06
BRO1YPL084W YBR056WP38081 501 aa2.17□□□□□ -2.06
BRO1YPL084W OLA1P38219 394 aaKnown RBP2.17□□□□□ -2.06
BRO1YPL084W TIF5P38431 405 aaKnown RBP2.17□□□□□ -2.06
BRO1YPL084W YHR218WP38899 603 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms