RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W SYF1Q04048 859 aaPredicted RBP3.89□□□□□ -1.79
VAM3YOR106W HSP42Q12329 375 aa3.89□□□□□ -1.79
VAM3YOR106W ORT1Q12375 292 aa3.89□□□□□ -1.79
VAM3YOR106W RTN2Q12443 393 aa3.89□□□□□ -1.79
VAM3YOR106W NFT1P0CE68 1218 aa3.88□□□□□ -1.79
VAM3YOR106W NAT1P12945 854 aaKnown RBP3.88□□□□□ -1.79
VAM3YOR106W SEC63P14906 663 aa3.88□□□□□ -1.79
VAM3YOR106W CLC1P17891 233 aa3.88□□□□□ -1.79
VAM3YOR106W CLB3P24870 427 aa3.88□□□□□ -1.79
VAM3YOR106W POP5P28005 173 aa3.88□□□□□ -1.79
VAM3YOR106W NDE1P40215 560 aa3.88□□□□□ -1.79
VAM3YOR106W RPS0BP46654 252 aaKnown RBP3.88□□□□□ -1.79
VAM3YOR106W RPA49Q01080 415 aaPredicted RBP3.88□□□□□ -1.79
VAM3YOR106W RRP45Q05636 305 aaKnown RBP3.88□□□□□ -1.79
VAM3YOR106W IRC25Q07951 179 aa3.88□□□□□ -1.79
VAM3YOR106W FDH1Q08911 376 aa3.88□□□□□ -1.79
VAM3YOR106W RED1P14291 827 aa3.87□□□□□ -1.79
VAM3YOR106W SPO7P18410 259 aa3.87□□□□□ -1.79
VAM3YOR106W SIN4P32259 974 aa3.87□□□□□ -1.79
VAM3YOR106W SRV2P17555 526 aaKnown RBP3.86□□□□□ -1.79
VAM3YOR106W SAS3P34218 831 aa3.86□□□□□ -1.79
VAM3YOR106W MRPL10P36520 322 aa3.86□□□□□ -1.79
VAM3YOR106W NTC20P38302 140 aaPredicted RBP3.86□□□□□ -1.79
VAM3YOR106W HAL1Q01766 294 aa3.86□□□□□ -1.79
VAM3YOR106W CLN1P20437 546 aa3.85□□□□□ -1.79
VAM3YOR106W PCL1P24867 279 aa3.85□□□□□ -1.79
VAM3YOR106W RHB1P25378 209 aa3.85□□□□□ -1.79
VAM3YOR106W KRE2P27809 442 aa3.85□□□□□ -1.79
VAM3YOR106W BEM1P29366 551 aa3.85□□□□□ -1.79
VAM3YOR106W RML2P32611 393 aa3.85□□□□□ -1.79
VAM3YOR106W RFC3P38629 340 aa3.85□□□□□ -1.79
VAM3YOR106W PCF11P39081 626 aaPredicted RBP3.85□□□□□ -1.79
VAM3YOR106W AZR1P50080 613 aa3.85□□□□□ -1.79
VAM3YOR106W SKI7Q08491 747 aaPredicted RBP3.85□□□□□ -1.79
VAM3YOR106W VAM3Q12241 283 aa3.85□□□□□ -1.79
VAM3YOR106W RTP1Q12751 981 aa3.85□□□□□ -1.79
VAM3YOR106W CYC3P06182 269 aa3.84□□□□□ -1.79
VAM3YOR106W UTH1P36135 365 aa3.84□□□□□ -1.79
VAM3YOR106W TAF11Q04226 346 aa3.84□□□□□ -1.79
VAM3YOR106W YRM1Q12340 786 aa3.84□□□□□ -1.79
VAM3YOR106W RMD5Q12508 421 aa3.84□□□□□ -1.79
VAM3YOR106W YOL159C-AQ3E769 90 aa3.84□□□□□ -1.79
VAM3YOR106W ILV5P06168 395 aaKnown RBP3.83□□□□□ -1.8
VAM3YOR106W CTR86P25355 563 aa3.83□□□□□ -1.8
VAM3YOR106W YGL138CP53122 345 aa3.83□□□□□ -1.8
VAM3YOR106W RHO5P53879 331 aaKnown RBP3.83□□□□□ -1.8
VAM3YOR106W SUB1P54000 292 aaKnown RBP3.83□□□□□ -1.8
VAM3YOR106W MDM30Q05930 598 aa3.83□□□□□ -1.8
VAM3YOR106W ERG3P32353 365 aa3.82□□□□□ -1.8
VAM3YOR106W RPN12P32496 274 aa3.82□□□□□ -1.8
VAM3YOR106W KAR9P32526 644 aa3.82□□□□□ -1.8
VAM3YOR106W COS5P47187 383 aa3.82□□□□□ -1.8
VAM3YOR106W PHB2P50085 310 aa3.82□□□□□ -1.8
VAM3YOR106W GPI15P53961 229 aa3.82□□□□□ -1.8
VAM3YOR106W COS7Q07788 383 aa3.82□□□□□ -1.8
VAM3YOR106W NAM2P11325 894 aa3.81□□□□□ -1.8
VAM3YOR106W SMY1P32364 656 aaKnown RBP3.81□□□□□ -1.8
VAM3YOR106W HIR2P32480 875 aa3.81□□□□□ -1.8
VAM3YOR106W SOR1P35497 357 aaKnown RBP3.81□□□□□ -1.8
VAM3YOR106W APE3P37302 537 aaKnown RBP3.81□□□□□ -1.8
VAM3YOR106W YHR131CP38835 850 aa3.81□□□□□ -1.8
VAM3YOR106W BRO1P48582 844 aa3.81□□□□□ -1.8
VAM3YOR106W OAZ1Q02803 292 aa3.81□□□□□ -1.8
VAM3YOR106W BCH1Q05029 724 aa3.81□□□□□ -1.8
VAM3YOR106W SOR2Q07786 357 aa3.81□□□□□ -1.8
VAM3YOR106W INH1P01097 85 aa3.8□□□□□ -1.8
VAM3YOR106W REC107P21651 314 aa3.8□□□□□ -1.8
VAM3YOR106W NPL6P32832 435 aa3.8□□□□□ -1.8
VAM3YOR106W YME2P32843 850 aa3.8□□□□□ -1.8
VAM3YOR106W JLP2P40206 208 aa3.8□□□□□ -1.8
VAM3YOR106W SSU1P41930 458 aa3.8□□□□□ -1.8
VAM3YOR106W GIP3Q03016 1276 aa3.8□□□□□ -1.8
VAM3YOR106W TAF12Q03761 539 aa3.8□□□□□ -1.8
VAM3YOR106W RKM1Q08961 583 aaPredicted RBP3.8□□□□□ -1.8
VAM3YOR106W SFI1Q12369 946 aa3.8□□□□□ -1.8
VAM3YOR106W SCEIP03882 235 aa3.79□□□□□ -1.8
VAM3YOR106W SPO12P17123 173 aa3.79□□□□□ -1.8
VAM3YOR106W CSE2P33308 149 aa3.79□□□□□ -1.8
VAM3YOR106W YAL037WP39728 267 aa3.79□□□□□ -1.8
VAM3YOR106W SFH5P47008 294 aa3.79□□□□□ -1.8
VAM3YOR106W MDE1P47095 244 aa3.79□□□□□ -1.8
VAM3YOR106W MTQ1P53944 314 aa3.79□□□□□ -1.8
VAM3YOR106W TSA2Q04120 196 aa3.79□□□□□ -1.8
VAM3YOR106W YLR287CQ05881 355 aa3.79□□□□□ -1.8
VAM3YOR106W CUE5Q08412 411 aaKnown RBP3.79□□□□□ -1.8
VAM3YOR106W RAD57P25301 460 aa3.78□□□□□ -1.8
VAM3YOR106W NUP2P32499 720 aa3.78□□□□□ -1.8
VAM3YOR106W MMS4P38257 691 aa3.78□□□□□ -1.8
VAM3YOR106W AIM10P39965 576 aaKnown RBP3.78□□□□□ -1.8
VAM3YOR106W UTP18P40362 594 aaPredicted RBP3.78□□□□□ -1.8
VAM3YOR106W GAB1P41733 394 aa3.78□□□□□ -1.8
VAM3YOR106W GPD2P41911 440 aaKnown RBP3.78□□□□□ -1.8
VAM3YOR106W ADA2Q02336 434 aa3.78□□□□□ -1.8
VAM3YOR106W NUP116Q02630 1113 aa3.78□□□□□ -1.8
VAM3YOR106W COG4Q06096 861 aa3.78□□□□□ -1.8
VAM3YOR106W YRF1-4O13559 1382 aa3.77□□□□□ -1.81
VAM3YOR106W YIL029CP40538 142 aa3.77□□□□□ -1.81
VAM3YOR106W PHO86P46956 311 aa3.77□□□□□ -1.81
VAM3YOR106W SKO1Q02100 647 aa3.77□□□□□ -1.81
VAM3YOR106W ARX1Q03862 593 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms