RNA–Protein interactions for RNA: YLR412W

BER1, Transcript of Protein involved in microtubule-related processes, yeastyeast

Gene BER1, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BER1YLR412W RPA49Q01080 415 aaPredicted RBP2.47□□□□□ -2.01
BER1YLR412W HAL1Q01766 294 aa2.47□□□□□ -2.01
BER1YLR412W SGT1Q08446 395 aa2.47□□□□□ -2.01
BER1YLR412W BUD21Q08492 214 aaPredicted RBP2.47□□□□□ -2.01
BER1YLR412W FDH1Q08911 376 aa2.47□□□□□ -2.01
BER1YLR412W SNT1P25357 1226 aa2.46□□□□□ -2.02
BER1YLR412W LSB5P25369 354 aa2.46□□□□□ -2.02
BER1YLR412W RFC3P38629 340 aa2.46□□□□□ -2.02
BER1YLR412W RPS0BP46654 252 aaKnown RBP2.46□□□□□ -2.02
BER1YLR412W YJR011CP47086 261 aaPredicted RBP2.46□□□□□ -2.02
BER1YLR412W BRO1P48582 844 aa2.46□□□□□ -2.02
BER1YLR412W BET5Q03630 159 aa2.46□□□□□ -2.02
BER1YLR412W REX4Q08237 289 aa2.46□□□□□ -2.02
BER1YLR412W YOL159C-AQ3E769 90 aa2.46□□□□□ -2.02
BER1YLR412W ILV5P06168 395 aaKnown RBP2.45□□□□□ -2.02
BER1YLR412W POP5P28005 173 aa2.45□□□□□ -2.02
BER1YLR412W SIN4P32259 974 aa2.45□□□□□ -2.02
BER1YLR412W RML2P32611 393 aa2.45□□□□□ -2.02
BER1YLR412W SAS3P34218 831 aa2.45□□□□□ -2.02
BER1YLR412W HCS1P34243 683 aa2.45□□□□□ -2.02
BER1YLR412W ARA1P38115 344 aa2.45□□□□□ -2.02
BER1YLR412W NDE1P40215 560 aa2.45□□□□□ -2.02
BER1YLR412W DLD2P46681 530 aaKnown RBP2.45□□□□□ -2.02
BER1YLR412W AZR1P50080 613 aa2.45□□□□□ -2.02
BER1YLR412W FMS1P50264 508 aa2.45□□□□□ -2.02
BER1YLR412W MDM30Q05930 598 aa2.45□□□□□ -2.02
BER1YLR412W YRM1Q12340 786 aa2.45□□□□□ -2.02
BER1YLR412W RMD5Q12508 421 aa2.45□□□□□ -2.02
BER1YLR412W RTP1Q12751 981 aa2.45□□□□□ -2.02
BER1YLR412W RHB1P25378 209 aa2.44□□□□□ -2.02
BER1YLR412W KAR9P32526 644 aa2.44□□□□□ -2.02
BER1YLR412W PHB2P50085 310 aa2.44□□□□□ -2.02
BER1YLR412W TSA2Q04120 196 aa2.44□□□□□ -2.02
BER1YLR412W IRC25Q07951 179 aa2.44□□□□□ -2.02
BER1YLR412W SKI7Q08491 747 aaPredicted RBP2.44□□□□□ -2.02
BER1YLR412W RTN2Q12443 393 aa2.44□□□□□ -2.02
BER1YLR412W RAD57P25301 460 aa2.43□□□□□ -2.02
BER1YLR412W CTR86P25355 563 aa2.43□□□□□ -2.02
BER1YLR412W KRE2P27809 442 aa2.43□□□□□ -2.02
BER1YLR412W BEM1P29366 551 aa2.43□□□□□ -2.02
BER1YLR412W CSE2P33308 149 aa2.43□□□□□ -2.02
BER1YLR412W VAM3Q12241 283 aa2.43□□□□□ -2.02
BER1YLR412W RED1P14291 827 aa2.42□□□□□ -2.02
BER1YLR412W SPO12P17123 173 aa2.42□□□□□ -2.02
BER1YLR412W SPO7P18410 259 aa2.42□□□□□ -2.02
BER1YLR412W SOR1P35497 357 aaKnown RBP2.42□□□□□ -2.02
BER1YLR412W RHO5P53879 331 aaKnown RBP2.42□□□□□ -2.02
BER1YLR412W TAF11Q04226 346 aa2.42□□□□□ -2.02
BER1YLR412W RRP45Q05636 305 aaKnown RBP2.42□□□□□ -2.02
BER1YLR412W TSR2Q06672 205 aaKnown RBP2.42□□□□□ -2.02
BER1YLR412W SOR2Q07786 357 aa2.42□□□□□ -2.02
BER1YLR412W HSP42Q12329 375 aa2.42□□□□□ -2.02
BER1YLR412W AHC1Q12433 566 aa2.42□□□□□ -2.02
BER1YLR412W CLN1P20437 546 aa2.41□□□□□ -2.02
BER1YLR412W CLB3P24870 427 aa2.41□□□□□ -2.02
BER1YLR412W GEX1P25596 615 aa2.41□□□□□ -2.02
BER1YLR412W ERG3P32353 365 aa2.41□□□□□ -2.02
BER1YLR412W SMY1P32364 656 aaKnown RBP2.41□□□□□ -2.02
BER1YLR412W HIR2P32480 875 aa2.41□□□□□ -2.02
BER1YLR412W NUP2P32499 720 aa2.41□□□□□ -2.02
BER1YLR412W NPL6P32832 435 aa2.41□□□□□ -2.02
BER1YLR412W NTC20P38302 140 aaPredicted RBP2.41□□□□□ -2.02
BER1YLR412W PCF11P39081 626 aaPredicted RBP2.41□□□□□ -2.02
BER1YLR412W JLP2P40206 208 aa2.41□□□□□ -2.02
BER1YLR412W GAB1P41733 394 aa2.41□□□□□ -2.02
BER1YLR412W COS5P47187 383 aa2.41□□□□□ -2.02
BER1YLR412W YGL138CP53122 345 aa2.41□□□□□ -2.02
BER1YLR412W GPI15P53961 229 aa2.41□□□□□ -2.02
BER1YLR412W OAZ1Q02803 292 aa2.41□□□□□ -2.02
BER1YLR412W COS7Q07788 383 aa2.41□□□□□ -2.02
BER1YLR412W CUE5Q08412 411 aaKnown RBP2.41□□□□□ -2.02
BER1YLR412W YDL012CQ12489 107 aa2.41□□□□□ -2.02
BER1YLR412W HSP26P15992 214 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
BER1YLR412W SRV2P17555 526 aaKnown RBP2.4□□□□□ -2.03
BER1YLR412W CLC1P17891 233 aa2.4□□□□□ -2.03
BER1YLR412W APE3P37302 537 aaKnown RBP2.4□□□□□ -2.03
BER1YLR412W MRP21P38175 177 aa2.4□□□□□ -2.03
BER1YLR412W AIM10P39965 576 aaKnown RBP2.4□□□□□ -2.03
BER1YLR412W UTP18P40362 594 aaPredicted RBP2.4□□□□□ -2.03
BER1YLR412W MDE1P47095 244 aa2.4□□□□□ -2.03
BER1YLR412W YJR085CP47131 105 aaKnown RBP2.4□□□□□ -2.03
BER1YLR412W ADA2Q02336 434 aa2.4□□□□□ -2.03
BER1YLR412W NUP116Q02630 1113 aa2.4□□□□□ -2.03
BER1YLR412W GIP3Q03016 1276 aa2.4□□□□□ -2.03
BER1YLR412W ARX1Q03862 593 aaKnown RBP2.4□□□□□ -2.03
BER1YLR412W BCH1Q05029 724 aa2.4□□□□□ -2.03
BER1YLR412W RKM1Q08961 583 aaPredicted RBP2.4□□□□□ -2.03
BER1YLR412W IZH2Q12442 317 aa2.4□□□□□ -2.03
BER1YLR412W PGA3Q12746 312 aaKnown RBP2.4□□□□□ -2.03
BER1YLR412W NAM2P11325 894 aa2.39□□□□□ -2.03
BER1YLR412W YME2P32843 850 aa2.39□□□□□ -2.03
BER1YLR412W YAL037WP39728 267 aa2.39□□□□□ -2.03
BER1YLR412W PHO86P46956 311 aa2.39□□□□□ -2.03
BER1YLR412W SFH5P47008 294 aa2.39□□□□□ -2.03
BER1YLR412W SCEIP03882 235 aa2.38□□□□□ -2.03
BER1YLR412W MIG3P39943 394 aa2.38□□□□□ -2.03
BER1YLR412W APJ1P53940 528 aa2.38□□□□□ -2.03
BER1YLR412W MTQ1P53944 314 aa2.38□□□□□ -2.03
BER1YLR412W TAF12Q03761 539 aa2.38□□□□□ -2.03
BER1YLR412W PLP2Q12017 286 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms