RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W TRS65P32893 560 aa1.35□□□□□ -2.19
SLX4YLR135W PTR2P32901 601 aa1.35□□□□□ -2.19
SLX4YLR135W DAD2P36162 133 aa1.35□□□□□ -2.19
SLX4YLR135W PCA1P38360 1216 aa1.35□□□□□ -2.19
SLX4YLR135W ISC1P40015 477 aaKnown RBP1.35□□□□□ -2.19
SLX4YLR135W YNR048WP53740 393 aa1.35□□□□□ -2.19
SLX4YLR135W YPL107WQ02873 248 aa1.35□□□□□ -2.19
SLX4YLR135W GIP3Q03016 1276 aa1.35□□□□□ -2.19
SLX4YLR135W YDR541CQ03049 344 aa1.35□□□□□ -2.19
SLX4YLR135W ATG34Q12292 412 aa1.35□□□□□ -2.19
SLX4YLR135W ARG4P04076 463 aaPredicted RBP1.35□□□□□ -2.19
SLX4YLR135W RPL6BP05739 176 aaKnown RBP1.35□□□□□ -2.19
SLX4YLR135W RPL15AP05748 204 aaKnown RBP1.35□□□□□ -2.19
SLX4YLR135W YAR066WP0CX18 203 aa1.35□□□□□ -2.19
SLX4YLR135W YHR214WP0CX19 203 aa1.35□□□□□ -2.19
SLX4YLR135W PRP16P15938 1071 aaPredicted RBP1.35□□□□□ -2.19
SLX4YLR135W LSB5P25369 354 aa1.35□□□□□ -2.19
SLX4YLR135W KRR1P25586 316 aaPredicted RBP1.35□□□□□ -2.19
SLX4YLR135W NDI1P32340 513 aa1.35□□□□□ -2.19
SLX4YLR135W RSM22P36056 628 aa1.35□□□□□ -2.19
SLX4YLR135W UIP5P36137 443 aa1.35□□□□□ -2.19
SLX4YLR135W YCR041WP37265 110 aa1.35□□□□□ -2.19
SLX4YLR135W SHO1P40073 367 aa1.35□□□□□ -2.19
SLX4YLR135W ALG8P40351 577 aa1.35□□□□□ -2.19
SLX4YLR135W LAM5P43560 674 aa1.35□□□□□ -2.19
SLX4YLR135W COS10P52924 374 aa1.35□□□□□ -2.19
SLX4YLR135W PCP1P53259 346 aa1.35□□□□□ -2.19
SLX4YLR135W LSC1P53598 329 aaKnown RBP1.35□□□□□ -2.19
SLX4YLR135W RPL6AQ02326 176 aaKnown RBP1.35□□□□□ -2.19
SLX4YLR135W PRP3Q03338 469 aaPredicted RBP1.35□□□□□ -2.19
SLX4YLR135W NSE1Q07913 336 aa1.35□□□□□ -2.19
SLX4YLR135W PGC1Q08959 321 aa1.35□□□□□ -2.19
SLX4YLR135W SMF3Q12078 473 aaPredicted RBP1.35□□□□□ -2.19
SLX4YLR135W DAP1Q12091 152 aa1.35□□□□□ -2.19
SLX4YLR135W SRN2Q99176 213 aa1.35□□□□□ -2.19
SLX4YLR135W ILV5P06168 395 aaKnown RBP1.34□□□□□ -2.19
SLX4YLR135W RPL20AP0CX23 172 aaKnown RBP1.34□□□□□ -2.19
SLX4YLR135W RPL20BP0CX24 172 aaPredicted RBP1.34□□□□□ -2.19
SLX4YLR135W VMA2P16140 517 aaKnown RBP1.34□□□□□ -2.19
SLX4YLR135W ALG1P16661 449 aa1.34□□□□□ -2.19
SLX4YLR135W RAD57P25301 460 aa1.34□□□□□ -2.19
SLX4YLR135W YCR100CP25606 316 aa1.34□□□□□ -2.19
SLX4YLR135W YCR022CP25620 114 aa1.34□□□□□ -2.19
SLX4YLR135W TIP1P27654 210 aaPredicted RBP1.34□□□□□ -2.19
SLX4YLR135W RIM1P32445 135 aaKnown RBP1.34□□□□□ -2.19
SLX4YLR135W DPH2P32461 534 aa1.34□□□□□ -2.19
SLX4YLR135W YSW1P38280 609 aa1.34□□□□□ -2.19
SLX4YLR135W RRP4P38792 359 aaKnown RBP1.34□□□□□ -2.19
SLX4YLR135W RTT107P38850 1070 aa1.34□□□□□ -2.19
SLX4YLR135W LYS1P38998 373 aaRIP-Chip data1.34□□□□□ -2.19not detected
SLX4YLR135W PCF11P39081 626 aaPredicted RBP1.34□□□□□ -2.19
SLX4YLR135W DHH1P39517 506 aaKnown RBP1.34□□□□□ -2.19
SLX4YLR135W MST28P39552 234 aa1.34□□□□□ -2.19
SLX4YLR135W RPH1P39956 796 aa1.34□□□□□ -2.19
SLX4YLR135W RPR2P40571 144 aa1.34□□□□□ -2.19
SLX4YLR135W SAD1P43589 448 aa1.34□□□□□ -2.19
SLX4YLR135W YDL186WP48568 277 aa1.34□□□□□ -2.19
SLX4YLR135W BRO1P48582 844 aa1.34□□□□□ -2.19
SLX4YLR135W CAF40P53829 373 aa1.34□□□□□ -2.19
SLX4YLR135W TOF1P53840 1238 aa1.34□□□□□ -2.19
SLX4YLR135W YIF1P53845 314 aaKnown RBP1.34□□□□□ -2.19
SLX4YLR135W IBD2P53892 351 aa1.34□□□□□ -2.19
SLX4YLR135W YMR181CQ03231 154 aa1.34□□□□□ -2.19
SLX4YLR135W RSN1Q03516 953 aa1.34□□□□□ -2.19
SLX4YLR135W YFH1Q07540 174 aa1.34□□□□□ -2.19
SLX4YLR135W NOP6Q07623 225 aaKnown RBP1.34□□□□□ -2.19
SLX4YLR135W REX4Q08237 289 aa1.34□□□□□ -2.19
SLX4YLR135W CUE5Q08412 411 aaKnown RBP1.34□□□□□ -2.19
SLX4YLR135W SRL2Q12020 392 aa1.34□□□□□ -2.19
SLX4YLR135W YLL056CQ12177 298 aa1.34□□□□□ -2.19
SLX4YLR135W ORT1Q12375 292 aa1.34□□□□□ -2.19
SLX4YLR135W TFB5Q3E7C1 72 aaPredicted RBP1.34□□□□□ -2.19
SLX4YLR135W IMA3P0CW40 589 aa1.34□□□□□ -2.2
SLX4YLR135W IMA4P0CW41 589 aa1.34□□□□□ -2.2
SLX4YLR135W PHO84P25297 587 aaKnown RBP1.34□□□□□ -2.2
SLX4YLR135W POT1P27796 417 aaKnown RBP RIP-Chip data1.34□□□□□ -2.2not detected
SLX4YLR135W GLC7P32598 312 aaKnown RBP1.34□□□□□ -2.2
SLX4YLR135W YEL043WP32618 956 aa1.34□□□□□ -2.2
SLX4YLR135W PMU1P36069 295 aa1.34□□□□□ -2.2
SLX4YLR135W MRPL4P36517 319 aa1.34□□□□□ -2.2
SLX4YLR135W ADH5P38113 351 aaKnown RBP1.34□□□□□ -2.2
SLX4YLR135W MTC4P38335 694 aaKnown RBP1.34□□□□□ -2.2
SLX4YLR135W INM1P38710 295 aa1.34□□□□□ -2.2
SLX4YLR135W MDM31P38880 579 aa1.34□□□□□ -2.2
SLX4YLR135W CHS6P40955 746 aa1.34□□□□□ -2.2
SLX4YLR135W PAC11P40960 533 aa1.34□□□□□ -2.2
SLX4YLR135W HMS2P47175 358 aa1.34□□□□□ -2.2
SLX4YLR135W AVT4P50944 713 aa1.34□□□□□ -2.2
SLX4YLR135W RHO5P53879 331 aaKnown RBP1.34□□□□□ -2.2
SLX4YLR135W PPM1Q04081 328 aa1.34□□□□□ -2.2
SLX4YLR135W SNT309Q06091 175 aaPredicted RBP1.34□□□□□ -2.2
SLX4YLR135W RRP9Q06506 573 aaKnown RBP1.34□□□□□ -2.2
SLX4YLR135W IMA2Q08295 589 aa1.34□□□□□ -2.2
SLX4YLR135W TIM18Q08749 192 aa1.34□□□□□ -2.2
SLX4YLR135W AYT1Q12226 474 aa1.34□□□□□ -2.2
SLX4YLR135W CEX1Q12453 761 aa1.34□□□□□ -2.2
SLX4YLR135W FRE6Q12473 712 aa1.34□□□□□ -2.2
SLX4YLR135W SET6Q12529 373 aa1.34□□□□□ -2.2
SLX4YLR135W RRP12Q12754 1228 aaKnown RBP1.34□□□□□ -2.2
SLX4YLR135W RAD61Q99359 647 aa1.34□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms