RNA–Protein interactions for RNA: YJR102C

VPS25, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS25, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS25YJR102C SGT1Q08446 395 aa3.48□□□□□ -1.85
VPS25YJR102C RRP12Q12754 1228 aaKnown RBP3.48□□□□□ -1.85
VPS25YJR102C SNT1P25357 1226 aa3.47□□□□□ -1.85
VPS25YJR102C LSB5P25369 354 aa3.47□□□□□ -1.85
VPS25YJR102C PIM1P36775 1133 aa3.47□□□□□ -1.85
VPS25YJR102C MIX23P38162 196 aa3.47□□□□□ -1.85
VPS25YJR102C SLM4P38247 162 aa3.47□□□□□ -1.85
VPS25YJR102C RRT2P38332 387 aa3.47□□□□□ -1.85
VPS25YJR102C RFC3P38629 340 aa3.47□□□□□ -1.85
VPS25YJR102C SRP72P38688 640 aaKnown RBP3.47□□□□□ -1.85
VPS25YJR102C GIS2P53849 153 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
VPS25YJR102C GIP3Q03016 1276 aa3.47□□□□□ -1.85
VPS25YJR102C HOT1Q03213 719 aa3.47□□□□□ -1.85
VPS25YJR102C RRN11Q04712 507 aa3.47□□□□□ -1.85
VPS25YJR102C TSR1Q07381 788 aaKnown RBP3.47□□□□□ -1.85
VPS25YJR102C YOR387CQ08910 206 aa3.47□□□□□ -1.85
VPS25YJR102C RSA1Q08932 381 aa3.47□□□□□ -1.85
VPS25YJR102C SMC6Q12749 1114 aa3.47□□□□□ -1.85
VPS25YJR102C RAD61Q99359 647 aa3.47□□□□□ -1.85
VPS25YJR102C HHF1P02309 103 aaKnown RBP3.46□□□□□ -1.86
VPS25YJR102C SCEIP03882 235 aa3.46□□□□□ -1.86
VPS25YJR102C SPS22P25380 463 aa3.46□□□□□ -1.86
VPS25YJR102C ITR1P30605 584 aa3.46□□□□□ -1.86
VPS25YJR102C PXA2P34230 853 aa3.46□□□□□ -1.86
VPS25YJR102C KKQ8P36004 724 aa3.46□□□□□ -1.86
VPS25YJR102C RRN10P38204 145 aa3.46□□□□□ -1.86
VPS25YJR102C RRP4P38792 359 aaKnown RBP3.46□□□□□ -1.86
VPS25YJR102C MTC6P38849 526 aa3.46□□□□□ -1.86
VPS25YJR102C YNR048WP53740 393 aa3.46□□□□□ -1.86
VPS25YJR102C PPM1Q04081 328 aa3.46□□□□□ -1.86
VPS25YJR102C SMA2Q04658 369 aa3.46□□□□□ -1.86
VPS25YJR102C MMR1Q06324 491 aa3.46□□□□□ -1.86
VPS25YJR102C SNX3Q08826 162 aaKnown RBP3.46□□□□□ -1.86
VPS25YJR102C RKM1Q08961 583 aaPredicted RBP3.46□□□□□ -1.86
VPS25YJR102C ORT1Q12375 292 aa3.46□□□□□ -1.86
VPS25YJR102C ILV5P06168 395 aaKnown RBP3.45□□□□□ -1.86
VPS25YJR102C HOM3P10869 527 aa3.45□□□□□ -1.86
VPS25YJR102C SMY1P32364 656 aaKnown RBP3.45□□□□□ -1.86
VPS25YJR102C VMA8P32610 256 aaKnown RBP3.45□□□□□ -1.86
VPS25YJR102C PAD1P33751 242 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
VPS25YJR102C YBR139WP38109 508 aa3.45□□□□□ -1.86
VPS25YJR102C FAA2P39518 744 aa3.45□□□□□ -1.86
VPS25YJR102C YPI1P43587 155 aa3.45□□□□□ -1.86
VPS25YJR102C PHO86P46956 311 aa3.45□□□□□ -1.86
VPS25YJR102C TOF1P53840 1238 aa3.45□□□□□ -1.86
VPS25YJR102C YLR345WQ06137 509 aa3.45□□□□□ -1.86
VPS25YJR102C TLG2Q08144 397 aa3.45□□□□□ -1.86
VPS25YJR102C MED2Q12124 431 aa3.45□□□□□ -1.86
VPS25YJR102C SPT15P13393 240 aaKnown RBP3.44□□□□□ -1.86
VPS25YJR102C MDH1P17505 334 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
VPS25YJR102C CPR2P23285 205 aa3.44□□□□□ -1.86
VPS25YJR102C PTH1P38876 190 aaKnown RBP3.44□□□□□ -1.86
VPS25YJR102C TCB2P48231 1178 aa3.44□□□□□ -1.86
VPS25YJR102C GPI15P53961 229 aa3.44□□□□□ -1.86
VPS25YJR102C ELP3Q02908 557 aaKnown RBP3.44□□□□□ -1.86
VPS25YJR102C RSN1Q03516 953 aa3.44□□□□□ -1.86
VPS25YJR102C CTR86P25355 563 aa3.43□□□□□ -1.86
VPS25YJR102C GEX1P25596 615 aa3.43□□□□□ -1.86
VPS25YJR102C NAM9P27929 486 aa3.43□□□□□ -1.86
VPS25YJR102C SDH3P33421 198 aa3.43□□□□□ -1.86
VPS25YJR102C YBR056WP38081 501 aa3.43□□□□□ -1.86
VPS25YJR102C PRM5P40476 318 aa3.43□□□□□ -1.86
VPS25YJR102C SPG5P42933 373 aa3.43□□□□□ -1.86
VPS25YJR102C HXT11P54862 567 aa3.43□□□□□ -1.86
VPS25YJR102C OAZ1Q02803 292 aa3.43□□□□□ -1.86
VPS25YJR102C YMR181CQ03231 154 aa3.43□□□□□ -1.86
VPS25YJR102C TAF12Q03761 539 aa3.43□□□□□ -1.86
VPS25YJR102C SKI7Q08491 747 aaPredicted RBP3.43□□□□□ -1.86
VPS25YJR102C MTR10Q99189 972 aa3.43□□□□□ -1.86
VPS25YJR102C MUD1P32605 298 aaKnown RBP3.42□□□□□ -1.86
VPS25YJR102C HEL1P36113 551 aa3.42□□□□□ -1.86
VPS25YJR102C RFS1P38234 210 aaKnown RBP3.42□□□□□ -1.86
VPS25YJR102C AZR1P50080 613 aa3.42□□□□□ -1.86
VPS25YJR102C YGL242CP53066 181 aa3.42□□□□□ -1.86
VPS25YJR102C RPT4P53549 437 aaKnown RBP3.42□□□□□ -1.86
VPS25YJR102C GYL1Q04322 720 aa3.42□□□□□ -1.86
VPS25YJR102C AEP3Q12089 606 aa3.42□□□□□ -1.86
VPS25YJR102C ERV2Q12284 196 aa3.42□□□□□ -1.86
VPS25YJR102C RMD5Q12508 421 aa3.42□□□□□ -1.86
VPS25YJR102C SPO12P17123 173 aa3.41□□□□□ -1.86
VPS25YJR102C PCF11P39081 626 aaPredicted RBP3.41□□□□□ -1.86
VPS25YJR102C YAL037WP39728 267 aa3.41□□□□□ -1.86
VPS25YJR102C SER3P40054 469 aa3.41□□□□□ -1.86
VPS25YJR102C YGR111WP53265 400 aa3.41□□□□□ -1.86
VPS25YJR102C DCI1Q08558 271 aa3.41□□□□□ -1.86
VPS25YJR102C BUG1Q12191 341 aa3.41□□□□□ -1.86
VPS25YJR102C TRP1P00912 224 aa3.4□□□□□ -1.87
VPS25YJR102C RAD57P25301 460 aa3.4□□□□□ -1.87
VPS25YJR102C YBR137WP38276 179 aa3.4□□□□□ -1.87
VPS25YJR102C CIK1Q01649 594 aa3.4□□□□□ -1.87
VPS25YJR102C HER2Q03557 464 aa3.4□□□□□ -1.87
VPS25YJR102C ERP4Q12450 207 aa3.4□□□□□ -1.87
VPS25YJR102C ADE4P04046 510 aaKnown RBP3.39□□□□□ -1.87
VPS25YJR102C IMA3P0CW40 589 aa3.39□□□□□ -1.87
VPS25YJR102C IMA4P0CW41 589 aa3.39□□□□□ -1.87
VPS25YJR102C ARO2P28777 376 aaKnown RBP3.39□□□□□ -1.87
VPS25YJR102C MNS1P32906 549 aa3.39□□□□□ -1.87
VPS25YJR102C YOX1P34161 385 aa3.39□□□□□ -1.87
VPS25YJR102C SWH1P35845 1188 aa3.39□□□□□ -1.87
VPS25YJR102C ZTA1P38230 334 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms