RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C SSK22P25390 1331 aaPredicted RBP4□□□□□ -1.77
TRM1YDR120C CPR2P23285 205 aa4□□□□□ -1.77
TRM1YDR120C BUB3P26449 341 aa4□□□□□ -1.77
TRM1YDR120C PRP21P32524 280 aaPredicted RBP4□□□□□ -1.77
TRM1YDR120C YGR117CP53270 476 aa4□□□□□ -1.77
TRM1YDR120C LSC1P53598 329 aaKnown RBP4□□□□□ -1.77
TRM1YDR120C SKO1Q02100 647 aa4□□□□□ -1.77
TRM1YDR120C RPM2Q02773 1202 aa4□□□□□ -1.77
TRM1YDR120C LEU4P06208 619 aaKnown RBP3.99□□□□□ -1.77
TRM1YDR120C MRS3P10566 314 aa3.99□□□□□ -1.77
TRM1YDR120C EXO70P19658 623 aa3.99□□□□□ -1.77
TRM1YDR120C PEX5P35056 612 aa3.99□□□□□ -1.77
TRM1YDR120C CBP4P37267 147 aa3.99□□□□□ -1.77
TRM1YDR120C APE3P37302 537 aaKnown RBP3.99□□□□□ -1.77
TRM1YDR120C VHC1P38329 1120 aa3.99□□□□□ -1.77
TRM1YDR120C LRP1P38801 184 aaKnown RBP3.99□□□□□ -1.77
TRM1YDR120C CCT2P39076 527 aaKnown RBP3.99□□□□□ -1.77
TRM1YDR120C SAD1P43589 448 aa3.99□□□□□ -1.77
TRM1YDR120C IKS1P47042 667 aa3.99□□□□□ -1.77
TRM1YDR120C ART5P53244 586 aaKnown RBP3.99□□□□□ -1.77
TRM1YDR120C OGG1P53397 376 aaPredicted RBP3.99□□□□□ -1.77
TRM1YDR120C IRC15Q02733 499 aa3.99□□□□□ -1.77
TRM1YDR120C YAP7Q08182 245 aa3.99□□□□□ -1.77
TRM1YDR120C VAM3Q12241 283 aa3.99□□□□□ -1.77
TRM1YDR120C VPS13Q07878 3144 aa3.99□□□□□ -1.77
TRM1YDR120C CAR1P00812 333 aaKnown RBP3.98□□□□□ -1.77
TRM1YDR120C SEC63P14906 663 aa3.98□□□□□ -1.77
TRM1YDR120C GEX1P25596 615 aa3.98□□□□□ -1.77
TRM1YDR120C REC114P32841 428 aa3.98□□□□□ -1.77
TRM1YDR120C NCS2P53923 493 aaPredicted RBP3.98□□□□□ -1.77
TRM1YDR120C YNL050CP53952 270 aa3.98□□□□□ -1.77
TRM1YDR120C CIK1Q01649 594 aa3.98□□□□□ -1.77
TRM1YDR120C LYS2P07702 1392 aa3.98□□□□□ -1.77
TRM1YDR120C MDH1P17505 334 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
TRM1YDR120C SIN4P32259 974 aa3.98□□□□□ -1.77
TRM1YDR120C RRT2P38332 387 aa3.98□□□□□ -1.77
TRM1YDR120C UBX2Q04228 584 aa3.98□□□□□ -1.77
TRM1YDR120C HCR1Q05775 265 aaKnown RBP3.98□□□□□ -1.77
TRM1YDR120C VPS74Q06385 345 aa3.98□□□□□ -1.77
TRM1YDR120C SNU66Q12420 587 aaPredicted RBP3.98□□□□□ -1.77
TRM1YDR120C KRE2P27809 442 aa3.97□□□□□ -1.77
TRM1YDR120C HIR2P32480 875 aa3.97□□□□□ -1.77
TRM1YDR120C SLM4P38247 162 aa3.97□□□□□ -1.77
TRM1YDR120C RFC3P38629 340 aa3.97□□□□□ -1.77
TRM1YDR120C RPS0BP46654 252 aaKnown RBP3.97□□□□□ -1.77
TRM1YDR120C ACL4Q03771 387 aa3.97□□□□□ -1.77
TRM1YDR120C HSP31Q04432 237 aa3.97□□□□□ -1.77
TRM1YDR120C MMR1Q06324 491 aa3.97□□□□□ -1.77
TRM1YDR120C GRS2Q06817 618 aa3.97□□□□□ -1.77
TRM1YDR120C HSP42Q12329 375 aa3.97□□□□□ -1.77
TRM1YDR120C SRV2P17555 526 aaKnown RBP3.96□□□□□ -1.78
TRM1YDR120C YCR022CP25620 114 aa3.96□□□□□ -1.78
TRM1YDR120C NDC1P32500 655 aa3.96□□□□□ -1.78
TRM1YDR120C RTR1P40084 226 aaPredicted RBP3.96□□□□□ -1.78
TRM1YDR120C YJL070CP40361 888 aa3.96□□□□□ -1.78
TRM1YDR120C HOT1Q03213 719 aa3.96□□□□□ -1.78
TRM1YDR120C MDM30Q05930 598 aa3.96□□□□□ -1.78
TRM1YDR120C RKM1Q08961 583 aaPredicted RBP3.96□□□□□ -1.78
TRM1YDR120C DAP1Q12091 152 aa3.96□□□□□ -1.78
TRM1YDR120C HKR1P41809 1802 aa3.96□□□□□ -1.78
TRM1YDR120C TAO3P40468 2376 aa3.96□□□□□ -1.78
TRM1YDR120C HIP1P06775 603 aa3.95□□□□□ -1.78
TRM1YDR120C URA4P20051 364 aa3.95□□□□□ -1.78
TRM1YDR120C BEM1P29366 551 aa3.95□□□□□ -1.78
TRM1YDR120C PTR2P32901 601 aa3.95□□□□□ -1.78
TRM1YDR120C SAS2P40963 338 aa3.95□□□□□ -1.78
TRM1YDR120C ELP2P42935 788 aa3.95□□□□□ -1.78
TRM1YDR120C GWT1P47026 490 aa3.95□□□□□ -1.78
TRM1YDR120C VPS9P54787 451 aa3.95□□□□□ -1.78
TRM1YDR120C CLN1P20437 546 aa3.95□□□□□ -1.78
TRM1YDR120C RHB1P25378 209 aa3.95□□□□□ -1.78
TRM1YDR120C BRF1P29056 596 aa3.95□□□□□ -1.78
TRM1YDR120C FRE2P36033 711 aa3.95□□□□□ -1.78
TRM1YDR120C HAT2P39984 401 aa3.95□□□□□ -1.78
TRM1YDR120C RTT101P47050 842 aa3.95□□□□□ -1.78
TRM1YDR120C ECM27P47144 725 aa3.95□□□□□ -1.78
TRM1YDR120C RRP46P53256 223 aaPredicted RBP3.95□□□□□ -1.78
TRM1YDR120C RPT4P53549 437 aaKnown RBP3.95□□□□□ -1.78
TRM1YDR120C DSL1P53847 754 aa3.95□□□□□ -1.78
TRM1YDR120C YDR387CQ04162 555 aa3.95□□□□□ -1.78
TRM1YDR120C YMR130WQ04223 302 aa3.95□□□□□ -1.78
TRM1YDR120C YPR117WQ06116 2489 aa3.94□□□□□ -1.78
TRM1YDR120C MTF1P14908 341 aaKnown RBP3.94□□□□□ -1.78
TRM1YDR120C ISC1P40015 477 aaKnown RBP3.94□□□□□ -1.78
TRM1YDR120C YJR011CP47086 261 aaPredicted RBP3.94□□□□□ -1.78
TRM1YDR120C VPS54Q12071 889 aa3.94□□□□□ -1.78
TRM1YDR120C GPM3Q12326 303 aa3.94□□□□□ -1.78
TRM1YDR120C CTF3Q12748 733 aa3.94□□□□□ -1.78
TRM1YDR120C RPL15AP05748 204 aaKnown RBP3.93□□□□□ -1.78
TRM1YDR120C CDC60P26637 1090 aaKnown RBP3.93□□□□□ -1.78
TRM1YDR120C ATS1P31386 333 aa3.93□□□□□ -1.78
TRM1YDR120C SPC110P32380 944 aa3.93□□□□□ -1.78
TRM1YDR120C MMS4P38257 691 aa3.93□□□□□ -1.78
TRM1YDR120C SER3P40054 469 aa3.93□□□□□ -1.78
TRM1YDR120C SHO1P40073 367 aa3.93□□□□□ -1.78
TRM1YDR120C SNM1P40993 198 aa3.93□□□□□ -1.78
TRM1YDR120C TRS85P46944 698 aa3.93□□□□□ -1.78
TRM1YDR120C YGR111WP53265 400 aa3.93□□□□□ -1.78
TRM1YDR120C ARK1P53974 638 aa3.93□□□□□ -1.78
TRM1YDR120C OAZ1Q02803 292 aa3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms