RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	HHO1	P53551	258 aa		3.89	□□□□□ -1.79
VMA1	YDL185W	ELA1	P53861	379 aa	Predicted RBP	3.89	□□□□□ -1.79
VMA1	YDL185W	AIM36	Q03798	255 aa		3.89	□□□□□ -1.79
VMA1	YDL185W	NHX1	Q04121	633 aa		3.89	□□□□□ -1.79
VMA1	YDL185W	YDR514C	Q04408	483 aa		3.89	□□□□□ -1.79
VMA1	YDL185W	YDL121C	Q07541	149 aa		3.89	□□□□□ -1.79
VMA1	YDL185W	YPL199C	Q08954	240 aa		3.89	□□□□□ -1.79
VMA1	YDL185W	ISN1	Q99312	450 aa		3.89	□□□□□ -1.79
VMA1	YDL185W	SPS2	P08459	502 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	ERG20	P08524	352 aa	Known RBP	3.88	□□□□□ -1.79
VMA1	YDL185W	GAL2	P13181	574 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	KIN82	P25341	720 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	PDR3	P33200	976 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	YHR033W	P38690	423 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	AIM18	P38884	321 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	FET3	P38993	636 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	SEN34	P39707	275 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	YEL025C	P39991	1188 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	YIR007W	P40566	764 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	CIN1	P40987	1014 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	RRT5	P43607	289 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	ROK1	P45818	564 aa	Predicted RBP	3.88	□□□□□ -1.79
VMA1	YDL185W	OCA1	P50946	238 aa	Predicted RBP	3.88	□□□□□ -1.79
VMA1	YDL185W	NBP35	P52920	328 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	NQM1	P53228	333 aa	Predicted RBP	3.88	□□□□□ -1.79
VMA1	YDL185W	YNL018C	P53976	612 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	ARP4	P80428	489 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	MEH1	Q02205	184 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	PRM15	Q03262	622 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	SYT1	Q06836	1226 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	PUN1	Q06991	263 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	ESC8	Q08119	714 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	NRT1	Q08485	598 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	FRE3	Q08905	711 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	YOR283W	Q12040	230 aa	Known RBP	3.88	□□□□□ -1.79
VMA1	YDL185W	MDY2	Q12285	212 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	PCD1	Q12524	340 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	RRP12	Q12754	1228 aa	Known RBP	3.88	□□□□□ -1.79
VMA1	YDL185W	AAC3	P18238	307 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	DBF20	P32328	564 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	LYP1	P32487	611 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	COT1	P32798	439 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	LIP5	P32875	414 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	CPR5	P35176	225 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	RSP5	P39940	809 aa	Known RBP	3.88	□□□□□ -1.79
VMA1	YDL185W	PRE6	P40303	254 aa	Known RBP	3.88	□□□□□ -1.79
VMA1	YDL185W	PRM8	P53174	237 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	YGL036W	P53185	909 aa	Predicted RBP	3.88	□□□□□ -1.79
VMA1	YDL185W	YGR067C	P53243	804 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	TPO2	P53283	614 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	OKP1	P53298	406 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	HPT1	Q04178	221 aa	Known RBP	3.88	□□□□□ -1.79
VMA1	YDL185W	ASR1	Q06834	288 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	BUD20	Q08004	166 aa	Predicted RBP	3.88	□□□□□ -1.79
VMA1	YDL185W	DFG16	Q99234	619 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	YLR422W	Q06409	1932 aa		3.88	□□□□□ -1.79
VMA1	YDL185W	CHS1	P08004	1131 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	YFR010W-A	P0C5N0	62 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.87	□□□□□ -1.79	not detected
VMA1	YDL185W	SYP1	P25623	870 aa	Known RBP	3.87	□□□□□ -1.79
VMA1	YDL185W	ISC10	P32645	267 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	MPM1	P40364	252 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	SEC28	P40509	296 aa	Known RBP	3.87	□□□□□ -1.79
VMA1	YDL185W	MNT3	P40549	630 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	YJL043W	P47053	257 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	PMT5	P52867	743 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	GTR2	P53290	341 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	3.87	□□□□□ -1.79	not detected
VMA1	YDL185W	TIM44	Q01852	431 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	NHP10	Q03435	203 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	DIB1	Q06819	143 aa	Predicted RBP	3.87	□□□□□ -1.79
VMA1	YDL185W	YDL086W	Q07505	273 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	BRX1	Q08235	291 aa	Known RBP	3.87	□□□□□ -1.79
VMA1	YDL185W	GPB1	Q08886	897 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	UBX3	Q12229	455 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	SUS1	Q6WNK7	96 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	TDH1	P00360	332 aa	Known RBP	3.87	□□□□□ -1.79
VMA1	YDL185W	HPR1	P17629	752 aa	Known RBP	3.87	□□□□□ -1.79
VMA1	YDL185W	SGF29	P25554	259 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	RPS7A	P26786	190 aa	Known RBP	3.87	□□□□□ -1.79
VMA1	YDL185W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.87	□□□□□ -1.79	not detected
VMA1	YDL185W	ABZ1	P37254	787 aa	Predicted RBP	3.87	□□□□□ -1.79
VMA1	YDL185W	FIR1	P40020	876 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	RAD17	P48581	401 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	EMI1	Q04406	187 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	CRD1	Q07560	283 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	RRT8	Q08219	342 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	IES4	Q08561	116 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.87	□□□□□ -1.79	not detected
VMA1	YDL185W	YPR063C	Q12160	140 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	OSW2	Q12202	724 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	YDL199C	Q12407	687 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	YOS9	Q99220	542 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	RPP1A	P05318	106 aa	Predicted RBP	3.87	□□□□□ -1.79
VMA1	YDL185W	HOM2	P13663	365 aa	Known RBP	3.87	□□□□□ -1.79
VMA1	YDL185W	FRS1	P15624	595 aa	Known RBP	3.87	□□□□□ -1.79
VMA1	YDL185W	GRR1	P24814	1151 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	CDC5	P32562	705 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	BSD2	P38356	321 aa		3.87	□□□□□ -1.79
VMA1	YDL185W	LAG1	P38703	411 aa		3.87	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 20 ms