RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B ARE2P53629 642 aaKnown RBP0.34□□□□□ -2.36
snR39BsnR39B MRPL13Q02204 264 aa0.34□□□□□ -2.36
snR39BsnR39B SOV1Q04748 898 aa0.34□□□□□ -2.36
snR39BsnR39B CMS1Q07897 291 aaKnown RBP0.34□□□□□ -2.36
snR39BsnR39B SNX3Q08826 162 aaKnown RBP0.34□□□□□ -2.36
snR39BsnR39B TCO89Q08921 799 aa0.34□□□□□ -2.36
snR39BsnR39B TRM8Q12009 286 aa0.34□□□□□ -2.36
snR39BsnR39B NBP2Q12163 236 aa0.34□□□□□ -2.36
snR39BsnR39B MF(ALPHA)1P01149 165 aa0.33□□□□□ -2.36
snR39BsnR39B TIP1P27654 210 aaPredicted RBP0.33□□□□□ -2.36
snR39BsnR39B HIR2P32480 875 aa0.33□□□□□ -2.36
snR39BsnR39B CNS1P33313 385 aa0.33□□□□□ -2.36
snR39BsnR39B YMR147WP40218 223 aaKnown RBP0.33□□□□□ -2.36
snR39BsnR39B SYG1P40528 902 aa0.33□□□□□ -2.36
snR39BsnR39B AAD10P47182 288 aa0.33□□□□□ -2.36
snR39BsnR39B PEX8P53248 589 aa0.33□□□□□ -2.36
snR39BsnR39B MFB1Q04922 465 aa0.33□□□□□ -2.36
snR39BsnR39B RPS19AP07280 144 aaKnown RBP0.32□□□□□ -2.36
snR39BsnR39B RPS19BP07281 144 aaPredicted RBP0.32□□□□□ -2.36
snR39BsnR39B ARD1P07347 238 aaPredicted RBP0.32□□□□□ -2.36
snR39BsnR39B PHO81P17442 1178 aa0.32□□□□□ -2.36
snR39BsnR39B MSM1P22438 575 aa0.32□□□□□ -2.36
snR39BsnR39B MRPL27P36526 146 aaPredicted RBP0.32□□□□□ -2.36
snR39BsnR39B AFG3P39925 761 aa0.32□□□□□ -2.36
snR39BsnR39B POP1P41812 875 aa0.32□□□□□ -2.36
snR39BsnR39B BIR1P47134 954 aa0.32□□□□□ -2.36
snR39BsnR39B UPF3P48412 387 aaKnown RBP0.32□□□□□ -2.36
snR39BsnR39B BIO3P50277 480 aa0.32□□□□□ -2.36
snR39BsnR39B YGR067CP53243 804 aa0.32□□□□□ -2.36
snR39BsnR39B SLG1P54867 378 aa0.32□□□□□ -2.36
snR39BsnR39B YET2Q04210 160 aa0.32□□□□□ -2.36
snR39BsnR39B YDR061WQ12298 539 aa0.32□□□□□ -2.36
snR39BsnR39B YOL087CQ99247 1116 aa0.32□□□□□ -2.36
snR39BsnR39B TPI1P00942 248 aaKnown RBP0.31□□□□□ -2.36
snR39BsnR39B SCH9P11792 824 aaKnown RBP0.31□□□□□ -2.36
snR39BsnR39B PRP2P20095 876 aaPredicted RBP0.31□□□□□ -2.36
snR39BsnR39B SLY1P22213 666 aa0.31□□□□□ -2.36
snR39BsnR39B PTP2P29461 750 aa0.31□□□□□ -2.36
snR39BsnR39B YPS1P32329 569 aa0.31□□□□□ -2.36
snR39BsnR39B ECT1P33412 323 aa0.31□□□□□ -2.36
snR39BsnR39B YCR041WP37265 110 aa0.31□□□□□ -2.36
snR39BsnR39B LUC7Q07508 261 aaPredicted RBP0.31□□□□□ -2.36
snR39BsnR39B YLL032CQ07834 825 aaKnown RBP RIP-Chip data0.31□□□□□ -2.36not detected
snR39BsnR39B FMP40Q08968 688 aaPredicted RBP0.31□□□□□ -2.36
snR39BsnR39B SPE4Q12455 300 aa0.31□□□□□ -2.36
snR39BsnR39B MSI1P13712 422 aa0.3□□□□□ -2.36
snR39BsnR39B KAR3P17119 729 aa0.3□□□□□ -2.36
snR39BsnR39B PRE8P23639 250 aa0.3□□□□□ -2.36
snR39BsnR39B ECM25P32525 599 aa0.3□□□□□ -2.36
snR39BsnR39B XRS2P33301 854 aa0.3□□□□□ -2.36
snR39BsnR39B CBF5P33322 483 aaKnown RBP RIP-Chip data0.3□□□□□ -2.36not detected
snR39BsnR39B AST1P35183 429 aa0.3□□□□□ -2.36
snR39BsnR39B UBP11P36026 717 aa0.3□□□□□ -2.36
snR39BsnR39B HEL1P36113 551 aa0.3□□□□□ -2.36
snR39BsnR39B MAL33P38157 468 aa0.3□□□□□ -2.36
snR39BsnR39B STP2P38704 541 aa0.3□□□□□ -2.36
snR39BsnR39B ERP2P39704 215 aa0.3□□□□□ -2.36
snR39BsnR39B ACA1P39970 489 aa0.3□□□□□ -2.36
snR39BsnR39B STB1P42845 420 aa0.3□□□□□ -2.36
snR39BsnR39B YIP1P53039 248 aa0.3□□□□□ -2.36
snR39BsnR39B HOT1Q03213 719 aa0.3□□□□□ -2.36
snR39BsnR39B RIF2Q06208 395 aa0.3□□□□□ -2.36
snR39BsnR39B PLB3Q08108 686 aa0.3□□□□□ -2.36
snR39BsnR39B YPR022CQ12139 1133 aa0.3□□□□□ -2.36
snR39BsnR39B SGS1P35187 1447 aa0.3□□□□□ -2.36
snR39BsnR39B ARG4P04076 463 aaPredicted RBP0.29□□□□□ -2.36
snR39BsnR39B SNF1P06782 633 aaKnown RBP0.29□□□□□ -2.36
snR39BsnR39B COR1P07256 457 aa0.29□□□□□ -2.36
snR39BsnR39B PUT4P15380 627 aa0.29□□□□□ -2.36
snR39BsnR39B PHO84P25297 587 aaKnown RBP0.29□□□□□ -2.36
snR39BsnR39B YIH1P25637 258 aa0.29□□□□□ -2.36
snR39BsnR39B ZIP1P31111 875 aa0.29□□□□□ -2.36
snR39BsnR39B DEP1P31385 405 aa0.29□□□□□ -2.36
snR39BsnR39B CHL4P38907 458 aa0.29□□□□□ -2.36
snR39BsnR39B CCT6P39079 546 aa0.29□□□□□ -2.36
snR39BsnR39B MBB1P39534 108 aa0.29□□□□□ -2.36
snR39BsnR39B SIP4P46954 829 aa0.29□□□□□ -2.36
snR39BsnR39B BNS1P50084 137 aa0.29□□□□□ -2.36
snR39BsnR39B YNR048WP53740 393 aa0.29□□□□□ -2.36
snR39BsnR39B NCS2P53923 493 aaPredicted RBP0.29□□□□□ -2.36
snR39BsnR39B DOS2P54858 310 aa0.29□□□□□ -2.36
snR39BsnR39B VID22Q05934 901 aa0.29□□□□□ -2.36
snR39BsnR39B SGT1Q08446 395 aa0.29□□□□□ -2.36
snR39BsnR39B SMF3Q12078 473 aaPredicted RBP0.29□□□□□ -2.36
snR39BsnR39B RTP1Q12751 981 aa0.29□□□□□ -2.36
snR39BsnR39B TMA7Q3E764 64 aaKnown RBP0.29□□□□□ -2.36
snR39BsnR39B RAV1P47104 1357 aa0.29□□□□□ -2.36
snR39BsnR39B ZRC1P20107 442 aa0.28□□□□□ -2.36
snR39BsnR39B POL4P25615 582 aa0.28□□□□□ -2.36
snR39BsnR39B PEP3P27801 918 aa0.28□□□□□ -2.36
snR39BsnR39B GYP6P32806 458 aa0.28□□□□□ -2.36
snR39BsnR39B PPQ1P32945 549 aa0.28□□□□□ -2.36
snR39BsnR39B AUR1P36107 401 aaPredicted RBP0.28□□□□□ -2.36
snR39BsnR39B YIL029CP40538 142 aa0.28□□□□□ -2.36
snR39BsnR39B YJR030CP47101 745 aa0.28□□□□□ -2.36
snR39BsnR39B ECM27P47144 725 aa0.28□□□□□ -2.36
snR39BsnR39B COQ5P49017 307 aa0.28□□□□□ -2.36
snR39BsnR39B LCL3P53153 274 aa0.28□□□□□ -2.36
snR39BsnR39B HST4P53688 370 aa0.28□□□□□ -2.36
snR39BsnR39B RHO5P53879 331 aaKnown RBP0.28□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms