RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W MMR1Q06324 491 aa2.25□□□□□ -2.05
BRO1YPL084W GPM3Q12326 303 aa2.25□□□□□ -2.05
BRO1YPL084W CTF3Q12748 733 aa2.25□□□□□ -2.05
BRO1YPL084W HIP1P06775 603 aa2.25□□□□□ -2.05
BRO1YPL084W YAR066WP0CX18 203 aa2.25□□□□□ -2.05
BRO1YPL084W YHR214WP0CX19 203 aa2.25□□□□□ -2.05
BRO1YPL084W GEX1P25596 615 aa2.25□□□□□ -2.05
BRO1YPL084W KRE2P27809 442 aa2.25□□□□□ -2.05
BRO1YPL084W YHR054CP38780 354 aa2.25□□□□□ -2.05
BRO1YPL084W LRP1P38801 184 aaKnown RBP2.25□□□□□ -2.05
BRO1YPL084W ALG8P40351 577 aa2.25□□□□□ -2.05
BRO1YPL084W GCD10P41814 478 aa2.25□□□□□ -2.05
BRO1YPL084W TRS85P46944 698 aa2.25□□□□□ -2.05
BRO1YPL084W YJR011CP47086 261 aaPredicted RBP2.25□□□□□ -2.05
BRO1YPL084W AVT4P50944 713 aa2.25□□□□□ -2.05
BRO1YPL084W YGL260WP53056 76 aa2.25□□□□□ -2.05
BRO1YPL084W CIK1Q01649 594 aa2.25□□□□□ -2.05
BRO1YPL084W ERP1Q05359 219 aaKnown RBP2.25□□□□□ -2.05
BRO1YPL084W HEL2Q05580 639 aaKnown RBP2.25□□□□□ -2.05
BRO1YPL084W SPO7P18410 259 aa2.24□□□□□ -2.05
BRO1YPL084W ECM25P32525 599 aa2.24□□□□□ -2.05
BRO1YPL084W PMU1P36069 295 aa2.24□□□□□ -2.05
BRO1YPL084W YCR041WP37265 110 aa2.24□□□□□ -2.05
BRO1YPL084W MDM31P38880 579 aa2.24□□□□□ -2.05
BRO1YPL084W YIP1P53039 248 aa2.24□□□□□ -2.05
BRO1YPL084W ARK1P53974 638 aa2.24□□□□□ -2.05
BRO1YPL084W PIR3Q03180 325 aa2.24□□□□□ -2.05
BRO1YPL084W RKM1Q08961 583 aaPredicted RBP2.24□□□□□ -2.05
BRO1YPL084W TY1B-AO13527 1196 aaKnown RBP2.24□□□□□ -2.05
BRO1YPL084W HEM2P05373 342 aa2.24□□□□□ -2.05
BRO1YPL084W CLN1P20437 546 aa2.24□□□□□ -2.05
BRO1YPL084W MCK1P21965 375 aaKnown RBP2.24□□□□□ -2.05
BRO1YPL084W MNE1P24720 663 aa2.24□□□□□ -2.05
BRO1YPL084W GLC7P32598 312 aaKnown RBP2.24□□□□□ -2.05
BRO1YPL084W LOS1P33418 1100 aaPredicted RBP2.24□□□□□ -2.05
BRO1YPL084W SOR1P35497 357 aaKnown RBP2.24□□□□□ -2.05
BRO1YPL084W SER3P40054 469 aa2.24□□□□□ -2.05
BRO1YPL084W LCB2P40970 561 aa2.24□□□□□ -2.05
BRO1YPL084W YGR111WP53265 400 aa2.24□□□□□ -2.05
BRO1YPL084W OCA2P53949 197 aa2.24□□□□□ -2.05
BRO1YPL084W OAZ1Q02803 292 aa2.24□□□□□ -2.05
BRO1YPL084W ODC1Q03028 310 aa2.24□□□□□ -2.05
BRO1YPL084W DCS1Q06151 350 aa2.24□□□□□ -2.05
BRO1YPL084W SOR2Q07786 357 aa2.24□□□□□ -2.05
BRO1YPL084W DCI1Q08558 271 aa2.24□□□□□ -2.05
BRO1YPL084W ATR1P13090 542 aa2.23□□□□□ -2.05
BRO1YPL084W FMP46P36141 133 aaKnown RBP2.23□□□□□ -2.05
BRO1YPL084W MEP2P41948 499 aa2.23□□□□□ -2.05
BRO1YPL084W BUD27P43573 796 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
BRO1YPL084W ECM27P47144 725 aa2.23□□□□□ -2.05
BRO1YPL084W COS10P52924 374 aa2.23□□□□□ -2.05
BRO1YPL084W RPT4P53549 437 aaKnown RBP2.23□□□□□ -2.05
BRO1YPL084W SNU66Q12420 587 aaPredicted RBP2.23□□□□□ -2.05
BRO1YPL084W HIS4P00815 799 aaKnown RBP2.23□□□□□ -2.05
BRO1YPL084W GDH1P07262 454 aaKnown RBP2.23□□□□□ -2.05
BRO1YPL084W CDC60P26637 1090 aaKnown RBP2.23□□□□□ -2.05
BRO1YPL084W YJL213WP40896 331 aa2.23□□□□□ -2.05
BRO1YPL084W SCS3P53012 380 aa2.23□□□□□ -2.05
BRO1YPL084W POP6P53218 158 aa2.23□□□□□ -2.05
BRO1YPL084W FRE4P53746 719 aa2.23□□□□□ -2.05
BRO1YPL084W YPR022CQ12139 1133 aa2.23□□□□□ -2.05
BRO1YPL084W SCEIP03882 235 aa2.22□□□□□ -2.05
BRO1YPL084W SAM1P10659 382 aaKnown RBP2.22□□□□□ -2.05
BRO1YPL084W SAM2P19358 384 aaKnown RBP2.22□□□□□ -2.05
BRO1YPL084W AGA1P32323 725 aa2.22□□□□□ -2.05
BRO1YPL084W RRN10P38204 145 aa2.22□□□□□ -2.05
BRO1YPL084W RRT5P43607 289 aa2.22□□□□□ -2.05
BRO1YPL084W YJL132WP47014 750 aa2.22□□□□□ -2.05
BRO1YPL084W HMS2P47175 358 aa2.22□□□□□ -2.05
BRO1YPL084W YDL186WP48568 277 aa2.22□□□□□ -2.05
BRO1YPL084W WSC2P53832 503 aa2.22□□□□□ -2.05
BRO1YPL084W VPS9P54787 451 aa2.22□□□□□ -2.05
BRO1YPL084W SXM1Q04175 944 aaKnown RBP2.22□□□□□ -2.05
BRO1YPL084W REX4Q08237 289 aa2.22□□□□□ -2.05
BRO1YPL084W SPE3Q12074 293 aaKnown RBP2.22□□□□□ -2.05
BRO1YPL084W AEP3Q12089 606 aa2.22□□□□□ -2.05
BRO1YPL084W MED2Q12124 431 aa2.22□□□□□ -2.05
BRO1YPL084W PAR32Q12515 295 aaKnown RBP2.22□□□□□ -2.05
BRO1YPL084W DNA2P38859 1522 aa2.22□□□□□ -2.05
BRO1YPL084W ARO3P14843 370 aaKnown RBP2.22□□□□□ -2.05
BRO1YPL084W PUT3P25502 979 aaPredicted RBP2.22□□□□□ -2.05
BRO1YPL084W CRM1P30822 1084 aaKnown RBP2.22□□□□□ -2.05
BRO1YPL084W ASC1P38011 319 aaKnown RBP2.22□□□□□ -2.05
BRO1YPL084W RRP4P38792 359 aaKnown RBP2.22□□□□□ -2.05
BRO1YPL084W LYS1P38998 373 aaRIP-Chip data2.22□□□□□ -2.05 RIP-Chip
BRO1YPL084W PHO86P46956 311 aa2.22□□□□□ -2.05
BRO1YPL084W UAF30Q08747 228 aa2.22□□□□□ -2.05
BRO1YPL084W MUM3Q08750 479 aa2.22□□□□□ -2.05
BRO1YPL084W YPL199CQ08954 240 aa2.22□□□□□ -2.05
BRO1YPL084W YMR230W-AQ3E7B5 62 aa2.22□□□□□ -2.05
BRO1YPL084W MTR10Q99189 972 aa2.22□□□□□ -2.05
BRO1YPL084W SWR1Q05471 1514 aa2.21□□□□□ -2.06
BRO1YPL084W LPD1P09624 499 aaKnown RBP2.21□□□□□ -2.06
BRO1YPL084W CPR1P14832 162 aaKnown RBP2.21□□□□□ -2.06
BRO1YPL084W SMY1P32364 656 aaKnown RBP2.21□□□□□ -2.06
BRO1YPL084W ZTA1P38230 334 aaKnown RBP2.21□□□□□ -2.06
BRO1YPL084W CAF40P53829 373 aa2.21□□□□□ -2.06
BRO1YPL084W GIP3Q03016 1276 aa2.21□□□□□ -2.06
BRO1YPL084W ERO1Q03103 563 aa2.21□□□□□ -2.06
BRO1YPL084W PPT2Q12036 173 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms