RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W ACL4Q03771 387 aa4.44□□□□□ -1.7
VPS28YPL065W MMR1Q06324 491 aa4.44□□□□□ -1.7
VPS28YPL065W DIS3Q08162 1001 aaKnown RBP4.44□□□□□ -1.7
VPS28YPL065W AYT1Q12226 474 aa4.44□□□□□ -1.7
VPS28YPL065W RHB1P25378 209 aa4.43□□□□□ -1.7
VPS28YPL065W GEX1P25596 615 aa4.43□□□□□ -1.7
VPS28YPL065W RSM22P36056 628 aa4.43□□□□□ -1.7
VPS28YPL065W SER3P40054 469 aa4.43□□□□□ -1.7
VPS28YPL065W YFR016CP43597 1233 aaKnown RBP4.43□□□□□ -1.7
VPS28YPL065W YMR130WQ04223 302 aa4.43□□□□□ -1.7
VPS28YPL065W GYL1Q04322 720 aa4.43□□□□□ -1.7
VPS28YPL065W VPS54Q12071 889 aa4.43□□□□□ -1.7
VPS28YPL065W HIP1P06775 603 aa4.42□□□□□ -1.7
VPS28YPL065W RPI1P23250 407 aaKnown RBP4.42□□□□□ -1.7
VPS28YPL065W YCR100CP25606 316 aa4.42□□□□□ -1.7
VPS28YPL065W BRF1P29056 596 aa4.42□□□□□ -1.7
VPS28YPL065W APE2P32454 952 aaKnown RBP4.42□□□□□ -1.7
VPS28YPL065W YCR041WP37265 110 aa4.42□□□□□ -1.7
VPS28YPL065W LRP1P38801 184 aaKnown RBP4.42□□□□□ -1.7
VPS28YPL065W RPH1P39956 796 aa4.42□□□□□ -1.7
VPS28YPL065W ALG8P40351 577 aa4.42□□□□□ -1.7
VPS28YPL065W GCD10P41814 478 aa4.42□□□□□ -1.7
VPS28YPL065W AVT4P50944 713 aa4.42□□□□□ -1.7
VPS28YPL065W CIK1Q01649 594 aa4.42□□□□□ -1.7
VPS28YPL065W HEL2Q05580 639 aaKnown RBP4.42□□□□□ -1.7
VPS28YPL065W GPM3Q12326 303 aa4.42□□□□□ -1.7
VPS28YPL065W HSP42Q12329 375 aa4.42□□□□□ -1.7
VPS28YPL065W SNU66Q12420 587 aaPredicted RBP4.42□□□□□ -1.7
VPS28YPL065W SET6Q12529 373 aa4.42□□□□□ -1.7
VPS28YPL065W TY1B-AO13527 1196 aaKnown RBP4.41□□□□□ -1.7
VPS28YPL065W HEM2P05373 342 aa4.41□□□□□ -1.7
VPS28YPL065W RPL20AP0CX23 172 aaKnown RBP4.41□□□□□ -1.7
VPS28YPL065W RPL20BP0CX24 172 aaPredicted RBP4.41□□□□□ -1.7
VPS28YPL065W CLN1P20437 546 aa4.41□□□□□ -1.7
VPS28YPL065W ECM25P32525 599 aa4.41□□□□□ -1.7
VPS28YPL065W LOS1P33418 1100 aaPredicted RBP4.41□□□□□ -1.7
VPS28YPL065W PEX5P35056 612 aa4.41□□□□□ -1.7
VPS28YPL065W PMU1P36069 295 aa4.41□□□□□ -1.7
VPS28YPL065W MMS4P38257 691 aa4.41□□□□□ -1.7
VPS28YPL065W ECM27P47144 725 aa4.41□□□□□ -1.7
VPS28YPL065W OCA2P53949 197 aa4.41□□□□□ -1.7
VPS28YPL065W HOT1Q03213 719 aa4.41□□□□□ -1.7
VPS28YPL065W ERP1Q05359 219 aaKnown RBP4.41□□□□□ -1.7
VPS28YPL065W DCS1Q06151 350 aa4.41□□□□□ -1.7
VPS28YPL065W RKM1Q08961 583 aaPredicted RBP4.41□□□□□ -1.7
VPS28YPL065W CTF3Q12748 733 aa4.41□□□□□ -1.7
VPS28YPL065W YAR066WP0CX18 203 aa4.4□□□□□ -1.71
VPS28YPL065W YHR214WP0CX19 203 aa4.4□□□□□ -1.71
VPS28YPL065W CDC60P26637 1090 aaKnown RBP4.4□□□□□ -1.71
VPS28YPL065W NDI1P32340 513 aa4.4□□□□□ -1.71
VPS28YPL065W SOR1P35497 357 aaKnown RBP4.4□□□□□ -1.71
VPS28YPL065W YHR054CP38780 354 aa4.4□□□□□ -1.71
VPS28YPL065W MDM31P38880 579 aa4.4□□□□□ -1.71
VPS28YPL065W YHR218WP38899 603 aa4.4□□□□□ -1.71
VPS28YPL065W KRE9P39005 276 aa4.4□□□□□ -1.71
VPS28YPL065W LCB2P40970 561 aa4.4□□□□□ -1.71
VPS28YPL065W YJR011CP47086 261 aaPredicted RBP4.4□□□□□ -1.71
VPS28YPL065W YIP1P53039 248 aa4.4□□□□□ -1.71
VPS28YPL065W RPT4P53549 437 aaKnown RBP4.4□□□□□ -1.71
VPS28YPL065W OAZ1Q02803 292 aa4.4□□□□□ -1.71
VPS28YPL065W PNG1Q02890 363 aa4.4□□□□□ -1.71
VPS28YPL065W PIR3Q03180 325 aa4.4□□□□□ -1.71
VPS28YPL065W SOR2Q07786 357 aa4.4□□□□□ -1.71
VPS28YPL065W CBS2P14905 389 aa4.39□□□□□ -1.71
VPS28YPL065W GLC7P32598 312 aaKnown RBP4.39□□□□□ -1.71
VPS28YPL065W YGR111WP53265 400 aa4.39□□□□□ -1.71
VPS28YPL065W ATR1P13090 542 aa4.38□□□□□ -1.71
VPS28YPL065W MCK1P21965 375 aaKnown RBP4.38□□□□□ -1.71
VPS28YPL065W MNE1P24720 663 aa4.38□□□□□ -1.71
VPS28YPL065W DED81P38707 554 aaKnown RBP4.38□□□□□ -1.71
VPS28YPL065W RRT5P43607 289 aa4.38□□□□□ -1.71
VPS28YPL065W COS10P52924 374 aa4.38□□□□□ -1.71
VPS28YPL065W POP6P53218 158 aa4.38□□□□□ -1.71
VPS28YPL065W WSC2P53832 503 aa4.38□□□□□ -1.71
VPS28YPL065W PAR32Q12515 295 aaKnown RBP4.38□□□□□ -1.71
VPS28YPL065W HIS4P00815 799 aaKnown RBP4.37□□□□□ -1.71
VPS28YPL065W SCEIP03882 235 aa4.37□□□□□ -1.71
VPS28YPL065W GDH1P07262 454 aaKnown RBP4.37□□□□□ -1.71
VPS28YPL065W ARO3P14843 370 aaKnown RBP4.37□□□□□ -1.71
VPS28YPL065W SPO7P18410 259 aa4.37□□□□□ -1.71
VPS28YPL065W PUT3P25502 979 aaPredicted RBP4.37□□□□□ -1.71
VPS28YPL065W AGA1P32323 725 aa4.37□□□□□ -1.71
VPS28YPL065W YJL213WP40896 331 aa4.37□□□□□ -1.71
VPS28YPL065W BUD27P43573 796 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
VPS28YPL065W YJL132WP47014 750 aa4.37□□□□□ -1.71
VPS28YPL065W ODC1Q03028 310 aa4.37□□□□□ -1.71
VPS28YPL065W TLG2Q08144 397 aa4.37□□□□□ -1.71
VPS28YPL065W UAF30Q08747 228 aa4.37□□□□□ -1.71
VPS28YPL065W YPR022CQ12139 1133 aa4.37□□□□□ -1.71
VPS28YPL065W RNA14P25298 677 aaKnown RBP4.36□□□□□ -1.71
VPS28YPL065W RRP4P38792 359 aaKnown RBP4.36□□□□□ -1.71
VPS28YPL065W EFM4P40516 257 aa4.36□□□□□ -1.71
VPS28YPL065W PHO86P46956 311 aa4.36□□□□□ -1.71
VPS28YPL065W YDL186WP48568 277 aa4.36□□□□□ -1.71
VPS28YPL065W DCI1Q08558 271 aa4.36□□□□□ -1.71
VPS28YPL065W SPE3Q12074 293 aaKnown RBP4.36□□□□□ -1.71
VPS28YPL065W COX3P00420 269 aa4.35□□□□□ -1.71
VPS28YPL065W ILV5P06168 395 aaKnown RBP4.35□□□□□ -1.71
VPS28YPL065W LPD1P09624 499 aaKnown RBP4.35□□□□□ -1.71
VPS28YPL065W SAM1P10659 382 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms