RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CST9	YLR394W	MFT1	P33441	392 aa	Known RBP	3.18	□□□□□ -1.9
CST9	YLR394W	PMU1	P36069	295 aa		3.18	□□□□□ -1.9
CST9	YLR394W	BYE1	P36106	594 aa		3.18	□□□□□ -1.9
CST9	YLR394W	SHO1	P40073	367 aa		3.18	□□□□□ -1.9
CST9	YLR394W	POP1	P41812	875 aa		3.18	□□□□□ -1.9
CST9	YLR394W	GCD10	P41814	478 aa		3.18	□□□□□ -1.9
CST9	YLR394W	DLD2	P46681	530 aa	Known RBP	3.18	□□□□□ -1.9
CST9	YLR394W	TRS85	P46944	698 aa		3.18	□□□□□ -1.9
CST9	YLR394W	GWT1	P47026	490 aa		3.18	□□□□□ -1.9
CST9	YLR394W	SET6	Q12529	373 aa		3.18	□□□□□ -1.9
CST9	YLR394W	CTF3	Q12748	733 aa		3.18	□□□□□ -1.9
CST9	YLR394W	MYO4	P32492	1471 aa		3.17	□□□□□ -1.9
CST9	YLR394W	GDH1	P07262	454 aa	Known RBP	3.17	□□□□□ -1.9
CST9	YLR394W	FUR1	P18562	216 aa	Known RBP	3.17	□□□□□ -1.9
CST9	YLR394W	IDH2	P28241	369 aa	Known RBP	3.17	□□□□□ -1.9
CST9	YLR394W	YNK1	P36010	153 aa	Known RBP	3.17	□□□□□ -1.9
CST9	YLR394W	CCT2	P39076	527 aa	Known RBP	3.17	□□□□□ -1.9
CST9	YLR394W	TFG2	P41896	400 aa	Predicted RBP	3.17	□□□□□ -1.9
CST9	YLR394W	VTC2	P43585	828 aa		3.17	□□□□□ -1.9
CST9	YLR394W	VPS74	Q06385	345 aa		3.17	□□□□□ -1.9
CST9	YLR394W	RHO2	P06781	192 aa		3.16	□□□□□ -1.9
CST9	YLR394W	RPL20A	P0CX23	172 aa	Known RBP	3.16	□□□□□ -1.9
CST9	YLR394W	RPL20B	P0CX24	172 aa	Predicted RBP	3.16	□□□□□ -1.9
CST9	YLR394W	RPC53	P25441	422 aa		3.16	□□□□□ -1.9
CST9	YLR394W	GEX1	P25596	615 aa		3.16	□□□□□ -1.9
CST9	YLR394W	NIP100	P33420	868 aa		3.16	□□□□□ -1.9
CST9	YLR394W	RRT5	P43607	289 aa		3.16	□□□□□ -1.9
CST9	YLR394W	ART5	P53244	586 aa	Known RBP	3.16	□□□□□ -1.9
CST9	YLR394W	BNI5	P53890	448 aa	Known RBP	3.16	□□□□□ -1.9
CST9	YLR394W	SFI1	Q12369	946 aa		3.16	□□□□□ -1.9
CST9	YLR394W	BRR1	Q99177	341 aa	Predicted RBP	3.16	□□□□□ -1.9
CST9	YLR394W	PDR10	P51533	1564 aa		3.15	□□□□□ -1.91
CST9	YLR394W	RIP1	P08067	215 aa		3.15	□□□□□ -1.91
CST9	YLR394W	ADK2	P26364	225 aa		3.15	□□□□□ -1.91
CST9	YLR394W	PRP21	P32524	280 aa	Predicted RBP	3.15	□□□□□ -1.91
CST9	YLR394W	FRE2	P36033	711 aa		3.15	□□□□□ -1.91
CST9	YLR394W	OTU2	P38747	307 aa	Known RBP	3.15	□□□□□ -1.91
CST9	YLR394W	MDM31	P38880	579 aa		3.15	□□□□□ -1.91
CST9	YLR394W	ALG8	P40351	577 aa		3.15	□□□□□ -1.91
CST9	YLR394W	YJL213W	P40896	331 aa		3.15	□□□□□ -1.91
CST9	YLR394W	AVT4	P50944	713 aa		3.15	□□□□□ -1.91
CST9	YLR394W	WSC2	P53832	503 aa		3.15	□□□□□ -1.91
CST9	YLR394W	RTT103	Q05543	409 aa		3.15	□□□□□ -1.91
CST9	YLR394W	MDM30	Q05930	598 aa		3.15	□□□□□ -1.91
CST9	YLR394W	YLR345W	Q06137	509 aa		3.15	□□□□□ -1.91
CST9	YLR394W	VTA1	Q06263	330 aa		3.15	□□□□□ -1.91
CST9	YLR394W	DNF3	Q12674	1656 aa		3.15	□□□□□ -1.91
CST9	YLR394W	PDR12	Q02785	1511 aa		3.14	□□□□□ -1.91
CST9	YLR394W	PDR15	Q04182	1529 aa	Known RBP	3.14	□□□□□ -1.91
CST9	YLR394W	GDB1	Q06625	1536 aa		3.14	□□□□□ -1.91
CST9	YLR394W	SPS4	P09937	338 aa		3.14	□□□□□ -1.91
CST9	YLR394W	ATR1	P13090	542 aa		3.14	□□□□□ -1.91
CST9	YLR394W	PDX1	P16451	410 aa		3.14	□□□□□ -1.91
CST9	YLR394W	PUT3	P25502	979 aa	Predicted RBP	3.14	□□□□□ -1.91
CST9	YLR394W	RFC3	P38629	340 aa		3.14	□□□□□ -1.91
CST9	YLR394W	DED81	P38707	554 aa	Known RBP	3.14	□□□□□ -1.91
CST9	YLR394W	ISC1	P40015	477 aa	Known RBP	3.14	□□□□□ -1.91
CST9	YLR394W	URB2	P47108	1174 aa		3.14	□□□□□ -1.91
CST9	YLR394W	IQG1	Q12280	1495 aa		3.14	□□□□□ -1.91
CST9	YLR394W	ARO1	P08566	1588 aa	Known RBP	3.14	□□□□□ -1.91
CST9	YLR394W	LEU4	P06208	619 aa	Known RBP	3.13	□□□□□ -1.91
CST9	YLR394W	GPH1	P06738	902 aa	Known RBP	3.13	□□□□□ -1.91
CST9	YLR394W	CHS1	P08004	1131 aa		3.13	□□□□□ -1.91
CST9	YLR394W	EXO70	P19658	623 aa		3.13	□□□□□ -1.91
CST9	YLR394W	CLB3	P24870	427 aa		3.13	□□□□□ -1.91
CST9	YLR394W	YCR051W	P25631	222 aa		3.13	□□□□□ -1.91
CST9	YLR394W	URA7	P28274	579 aa	Known RBP	3.13	□□□□□ -1.91
CST9	YLR394W	PRO3	P32263	286 aa	Known RBP	3.13	□□□□□ -1.91
CST9	YLR394W	GLC7	P32598	312 aa	Known RBP	3.13	□□□□□ -1.91
CST9	YLR394W	STB6	P36085	766 aa		3.13	□□□□□ -1.91
CST9	YLR394W	TIF5	P38431	405 aa	Known RBP	3.13	□□□□□ -1.91
CST9	YLR394W	SAS2	P40963	338 aa		3.13	□□□□□ -1.91
CST9	YLR394W	RMD9	P53140	646 aa	Known RBP	3.13	□□□□□ -1.91
CST9	YLR394W	SOV1	Q04748	898 aa		3.13	□□□□□ -1.91
CST9	YLR394W	ROY1	Q04847	553 aa		3.13	□□□□□ -1.91
CST9	YLR394W	TRM3	Q07527	1436 aa		3.13	□□□□□ -1.91
CST9	YLR394W	YRF1-4	O13559	1382 aa		3.13	□□□□□ -1.91
CST9	YLR394W	YLR278C	Q05854	1341 aa		3.13	□□□□□ -1.91
CST9	YLR394W	CYB2	P00175	591 aa		3.12	□□□□□ -1.91
CST9	YLR394W	YCR100C	P25606	316 aa		3.12	□□□□□ -1.91
CST9	YLR394W	ERV1	P27882	189 aa		3.12	□□□□□ -1.91
CST9	YLR394W	ITR1	P30605	584 aa		3.12	□□□□□ -1.91
CST9	YLR394W	YME2	P32843	850 aa		3.12	□□□□□ -1.91
CST9	YLR394W	HCS1	P34243	683 aa		3.12	□□□□□ -1.91
CST9	YLR394W	PCA1	P38360	1216 aa		3.12	□□□□□ -1.91
CST9	YLR394W	YHR218W	P38899	603 aa		3.12	□□□□□ -1.91
CST9	YLR394W	MNP1	P53163	194 aa	Predicted RBP	3.12	□□□□□ -1.91
CST9	YLR394W	PIR3	Q03180	325 aa		3.12	□□□□□ -1.91
CST9	YLR394W	PPT2	Q12036	173 aa		3.12	□□□□□ -1.91
CST9	YLR394W	NUP157	P40064	1391 aa	Known RBP	3.12	□□□□□ -1.91
CST9	YLR394W	CHC1	P22137	1653 aa	Known RBP	3.12	□□□□□ -1.91
CST9	YLR394W	SIN4	P32259	974 aa		3.11	□□□□□ -1.91
CST9	YLR394W	NDI1	P32340	513 aa		3.11	□□□□□ -1.91
CST9	YLR394W	SDS24	P38314	527 aa		3.11	□□□□□ -1.91
CST9	YLR394W	VHC1	P38329	1120 aa		3.11	□□□□□ -1.91
CST9	YLR394W	ELP2	P42935	788 aa		3.11	□□□□□ -1.91
CST9	YLR394W	PCP1	P53259	346 aa		3.11	□□□□□ -1.91
CST9	YLR394W	SPC19	Q03954	165 aa		3.11	□□□□□ -1.91
CST9	YLR394W	HSP31	Q04432	237 aa		3.11	□□□□□ -1.91
CST9	YLR394W	YCL021W-A	Q96VH3	125 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 57.1 ms