RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W YLL067W-AP0CY01 160 aa5.06□□□□□ -1.6
SPC42YKL042W PMR1P13586 950 aa5.06□□□□□ -1.6
SPC42YKL042W ARO3P14843 370 aaKnown RBP5.06□□□□□ -1.6
SPC42YKL042W APE2P32454 952 aaKnown RBP5.06□□□□□ -1.6
SPC42YKL042W LAS1P36146 502 aaPredicted RBP5.06□□□□□ -1.6
SPC42YKL042W ASC1P38011 319 aaKnown RBP5.06□□□□□ -1.6
SPC42YKL042W RRN10P38204 145 aa5.06□□□□□ -1.6
SPC42YKL042W WSS1P38838 269 aa5.06□□□□□ -1.6
SPC42YKL042W SCW4P53334 386 aaKnown RBP5.06□□□□□ -1.6
SPC42YKL042W PPM1Q04081 328 aa5.06□□□□□ -1.6
SPC42YKL042W YMR034CQ05131 434 aaPredicted RBP5.06□□□□□ -1.6
SPC42YKL042W MRPL51Q06090 140 aaPredicted RBP5.06□□□□□ -1.6
SPC42YKL042W SYO1Q07395 620 aa5.06□□□□□ -1.6
SPC42YKL042W YDL009CQ12210 107 aa5.06□□□□□ -1.6
SPC42YKL042W CSR2Q12734 1121 aa5.06□□□□□ -1.6
SPC42YKL042W RPL6BP05739 176 aaKnown RBP5.05□□□□□ -1.6
SPC42YKL042W AMD1P15274 810 aaKnown RBP5.05□□□□□ -1.6
SPC42YKL042W GLN3P18494 730 aa5.05□□□□□ -1.6
SPC42YKL042W KRR1P25586 316 aaPredicted RBP5.05□□□□□ -1.6
SPC42YKL042W RIM1P32445 135 aaKnown RBP5.05□□□□□ -1.6
SPC42YKL042W DAD2P36162 133 aa5.05□□□□□ -1.6
SPC42YKL042W YIL152WP40455 235 aa5.05□□□□□ -1.6
SPC42YKL042W YIR014WP40570 242 aa5.05□□□□□ -1.6
SPC42YKL042W MLC1P53141 149 aa5.05□□□□□ -1.6
SPC42YKL042W PCP1P53259 346 aa5.05□□□□□ -1.6
SPC42YKL042W RPL6AQ02326 176 aaKnown RBP5.05□□□□□ -1.6
SPC42YKL042W IRC15Q02733 499 aa5.05□□□□□ -1.6
SPC42YKL042W RLI1Q03195 608 aaKnown RBP5.05□□□□□ -1.6
SPC42YKL042W PRP42Q03776 544 aaKnown RBP5.05□□□□□ -1.6
SPC42YKL042W HIS4P00815 799 aaKnown RBP5.04□□□□□ -1.6
SPC42YKL042W ECM25P32525 599 aa5.04□□□□□ -1.6
SPC42YKL042W RSM22P36056 628 aa5.04□□□□□ -1.6
SPC42YKL042W ISC1P40015 477 aaKnown RBP5.04□□□□□ -1.6
SPC42YKL042W ELP2P42935 788 aa5.04□□□□□ -1.6
SPC42YKL042W TRS85P46944 698 aa5.04□□□□□ -1.6
SPC42YKL042W DIG1Q03063 452 aaKnown RBP5.04□□□□□ -1.6
SPC42YKL042W VPS74Q06385 345 aa5.04□□□□□ -1.6
SPC42YKL042W COX3P00420 269 aa5.03□□□□□ -1.6
SPC42YKL042W ADE4P04046 510 aaKnown RBP5.03□□□□□ -1.6
SPC42YKL042W PHO84P25297 587 aaKnown RBP5.03□□□□□ -1.6
SPC42YKL042W POT1P27796 417 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
SPC42YKL042W TRS65P32893 560 aa5.03□□□□□ -1.6
SPC42YKL042W ATO2P32907 282 aa5.03□□□□□ -1.6
SPC42YKL042W SIP2P34164 415 aaKnown RBP5.03□□□□□ -1.6
SPC42YKL042W OLA1P38219 394 aaKnown RBP5.03□□□□□ -1.6
SPC42YKL042W PFF1P38244 976 aa5.03□□□□□ -1.6
SPC42YKL042W YSW1P38280 609 aa5.03□□□□□ -1.6
SPC42YKL042W GDT1P38301 280 aaPredicted RBP5.03□□□□□ -1.6
SPC42YKL042W ARC40P38328 384 aaKnown RBP5.03□□□□□ -1.6
SPC42YKL042W PCA1P38360 1216 aa5.03□□□□□ -1.6
SPC42YKL042W RRP4P38792 359 aaKnown RBP5.03□□□□□ -1.6
SPC42YKL042W PHO86P46956 311 aa5.03□□□□□ -1.6
SPC42YKL042W TOF1P53840 1238 aa5.03□□□□□ -1.6
SPC42YKL042W YLR281CQ05863 155 aa5.03□□□□□ -1.6
SPC42YKL042W YDR061WQ12298 539 aa5.03□□□□□ -1.6
SPC42YKL042W FRE2P36033 711 aa5.02□□□□□ -1.61
SPC42YKL042W MLH1P38920 769 aa5.02□□□□□ -1.61
SPC42YKL042W PNG1Q02890 363 aa5.02□□□□□ -1.61
SPC42YKL042W BUG1Q12191 341 aa5.02□□□□□ -1.61
SPC42YKL042W YAR066WP0CX18 203 aa5.01□□□□□ -1.61
SPC42YKL042W YHR214WP0CX19 203 aa5.01□□□□□ -1.61
SPC42YKL042W SMY1P32364 656 aaKnown RBP5.01□□□□□ -1.61
SPC42YKL042W YCR041WP37265 110 aa5.01□□□□□ -1.61
SPC42YKL042W EPL1P43572 832 aa5.01□□□□□ -1.61
SPC42YKL042W YIP1P53039 248 aa5.01□□□□□ -1.61
SPC42YKL042W PIB2P53191 635 aa5.01□□□□□ -1.61
SPC42YKL042W MEH1Q02205 184 aa5.01□□□□□ -1.61
SPC42YKL042W GIP3Q03016 1276 aa5.01□□□□□ -1.61
SPC42YKL042W TAF12Q03761 539 aa5.01□□□□□ -1.61
SPC42YKL042W RPN9Q04062 393 aaKnown RBP5.01□□□□□ -1.61
SPC42YKL042W FMP42Q04991 504 aa5.01□□□□□ -1.61
SPC42YKL042W YDR341CQ05506 607 aaKnown RBP5.01□□□□□ -1.61
SPC42YKL042W SNA4Q07549 140 aa5.01□□□□□ -1.61
SPC42YKL042W REX4Q08237 289 aa5.01□□□□□ -1.61
SPC42YKL042W TFB5Q3E7C1 72 aaPredicted RBP5.01□□□□□ -1.61
SPC42YKL042W SMI1P32566 505 aa5□□□□□ -1.61
SPC42YKL042W RRP1P35178 278 aaPredicted RBP5□□□□□ -1.61
SPC42YKL042W MRPL4P36517 319 aa5□□□□□ -1.61
SPC42YKL042W ADH5P38113 351 aaKnown RBP5□□□□□ -1.61
SPC42YKL042W PCF11P39081 626 aaPredicted RBP5□□□□□ -1.61
SPC42YKL042W YIL169CP40442 995 aa5□□□□□ -1.61
SPC42YKL042W DIM1P41819 318 aaKnown RBP5□□□□□ -1.61
SPC42YKL042W GWT1P47026 490 aa5□□□□□ -1.61
SPC42YKL042W YLL056CQ12177 298 aa5□□□□□ -1.61
SPC42YKL042W VMA2P16140 517 aaKnown RBP4.99□□□□□ -1.61
SPC42YKL042W ALG1P16661 449 aa4.99□□□□□ -1.61
SPC42YKL042W TRX1P22217 103 aaKnown RBP4.99□□□□□ -1.61
SPC42YKL042W HSP104P31539 908 aaKnown RBP4.99□□□□□ -1.61
SPC42YKL042W NIP1P32497 812 aaKnown RBP4.99□□□□□ -1.61
SPC42YKL042W SIF2P38262 535 aa4.99□□□□□ -1.61
SPC42YKL042W POP2P39008 433 aa4.99□□□□□ -1.61
SPC42YKL042W MET30P39014 640 aa4.99□□□□□ -1.61
SPC42YKL042W GAT2P40209 560 aa4.99□□□□□ -1.61
SPC42YKL042W IKS1P47042 667 aa4.99□□□□□ -1.61
SPC42YKL042W HMS2P47175 358 aa4.99□□□□□ -1.61
SPC42YKL042W ROG1P53118 685 aa4.99□□□□□ -1.61
SPC42YKL042W NDL1Q06568 189 aa4.99□□□□□ -1.61
SPC42YKL042W GEP3Q08622 556 aa4.99□□□□□ -1.61
SPC42YKL042W RUP1Q12242 671 aa4.99□□□□□ -1.61
SPC42YKL042W DAP2P18962 818 aa4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms