RNA–Protein interactions for RNA: YHR038W

RRF1, Transcript of Mitochondrial ribosome recycling factor, yeastyeast

Gene RRF1, Length 693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRF1YHR038W DUG2P38149 878 aa2.23□□□□□ -2.05
RRF1YHR038W TCM62P38228 572 aaKnown RBP2.23□□□□□ -2.05
RRF1YHR038W TIF4631P39935 952 aaKnown RBP2.23□□□□□ -2.05
RRF1YHR038W YER034WP40022 185 aaKnown RBP2.23□□□□□ -2.05
RRF1YHR038W OCA1P50946 238 aaPredicted RBP2.23□□□□□ -2.05
RRF1YHR038W NUP84P52891 726 aa2.23□□□□□ -2.05
RRF1YHR038W LSG1P53145 640 aaKnown RBP2.23□□□□□ -2.05
RRF1YHR038W HOP2P53187 214 aa2.23□□□□□ -2.05
RRF1YHR038W EFM5P53200 248 aaKnown RBP2.23□□□□□ -2.05
RRF1YHR038W RTC4P53850 401 aa2.23□□□□□ -2.05
RRF1YHR038W YML131WQ03102 365 aa2.23□□□□□ -2.05
RRF1YHR038W ARO80Q04052 950 aa2.23□□□□□ -2.05
RRF1YHR038W SXM1Q04175 944 aaKnown RBP2.23□□□□□ -2.05
RRF1YHR038W UBX2Q04228 584 aa2.23□□□□□ -2.05
RRF1YHR038W YMR027WQ04371 470 aa2.23□□□□□ -2.05
RRF1YHR038W YMR111CQ04461 462 aaPredicted RBP2.23□□□□□ -2.05
RRF1YHR038W SML1Q04964 104 aa2.23□□□□□ -2.05
RRF1YHR038W NNT1Q05874 261 aa2.23□□□□□ -2.05
RRF1YHR038W ARV1Q06541 321 aa2.23□□□□□ -2.05
RRF1YHR038W ARR2Q06597 130 aa2.23□□□□□ -2.05
RRF1YHR038W TSR1Q07381 788 aaKnown RBP2.23□□□□□ -2.05
RRF1YHR038W YPL199CQ08954 240 aa2.23□□□□□ -2.05
RRF1YHR038W RKM1Q08961 583 aaPredicted RBP2.23□□□□□ -2.05
RRF1YHR038W RTC5Q12108 567 aaKnown RBP2.23□□□□□ -2.05
RRF1YHR038W NCE102Q12207 173 aaRIP-Chip data2.23□□□□□ -2.05not detected
RRF1YHR038W ERV2Q12284 196 aa2.23□□□□□ -2.05
RRF1YHR038W TRM3Q07527 1436 aa2.23□□□□□ -2.05
RRF1YHR038W RAV1P47104 1357 aa2.23□□□□□ -2.05
RRF1YHR038W XRN1P22147 1528 aaKnown RBP2.22□□□□□ -2.05
RRF1YHR038W RPO31P04051 1460 aa2.22□□□□□ -2.05
RRF1YHR038W RPS3P05750 240 aaKnown RBP2.22□□□□□ -2.05
RRF1YHR038W YAR066WP0CX18 203 aa2.22□□□□□ -2.05
RRF1YHR038W YHR214WP0CX19 203 aa2.22□□□□□ -2.05
RRF1YHR038W PET123P17558 318 aa2.22□□□□□ -2.05
RRF1YHR038W YCK1P23291 538 aa2.22□□□□□ -2.05
RRF1YHR038W MRPL25P23369 157 aa2.22□□□□□ -2.05
RRF1YHR038W ANP1P32629 500 aa2.22□□□□□ -2.05
RRF1YHR038W MSR1P38714 643 aa2.22□□□□□ -2.05
RRF1YHR038W BFR1P38934 470 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
RRF1YHR038W CAJ1P39101 391 aa2.22□□□□□ -2.05
RRF1YHR038W FAU1P40099 211 aa2.22□□□□□ -2.05
RRF1YHR038W DPH1P40487 425 aaKnown RBP2.22□□□□□ -2.05
RRF1YHR038W LYS14P40971 790 aa2.22□□□□□ -2.05
RRF1YHR038W SSN8P47821 323 aa2.22□□□□□ -2.05
RRF1YHR038W LCL3P53153 274 aa2.22□□□□□ -2.05
RRF1YHR038W POP6P53218 158 aa2.22□□□□□ -2.05
RRF1YHR038W SHY1P53266 389 aa2.22□□□□□ -2.05
RRF1YHR038W PEX25Q02969 394 aa2.22□□□□□ -2.05
RRF1YHR038W YMR102CQ03177 834 aa2.22□□□□□ -2.05
RRF1YHR038W VPS20Q04272 221 aa2.22□□□□□ -2.05
RRF1YHR038W ATG38Q05789 226 aaKnown RBP2.22□□□□□ -2.05
RRF1YHR038W SMD2Q06217 110 aaKnown RBP2.22□□□□□ -2.05
RRF1YHR038W MUM3Q08750 479 aa2.22□□□□□ -2.05
RRF1YHR038W HRT3Q12347 344 aa2.22□□□□□ -2.05
RRF1YHR038W LSO2Q3E772 92 aaKnown RBP2.22□□□□□ -2.05
RRF1YHR038W IRC20Q06554 1556 aa2.22□□□□□ -2.05
RRF1YHR038W MES1P00958 751 aaKnown RBP2.21□□□□□ -2.06
RRF1YHR038W TEF1P02994 458 aaKnown RBP2.21□□□□□ -2.06
RRF1YHR038W CDC37P06101 506 aaKnown RBP2.21□□□□□ -2.06
RRF1YHR038W LEU4P06208 619 aaKnown RBP2.21□□□□□ -2.06
RRF1YHR038W RNA14P25298 677 aaKnown RBP2.21□□□□□ -2.06
RRF1YHR038W DAL2P25335 343 aa2.21□□□□□ -2.06
RRF1YHR038W SPS22P25380 463 aa2.21□□□□□ -2.06
RRF1YHR038W YIM1P28625 365 aa2.21□□□□□ -2.06
RRF1YHR038W RME1P32338 300 aaKnown RBP2.21□□□□□ -2.06
RRF1YHR038W ACP1P32463 125 aa2.21□□□□□ -2.06
RRF1YHR038W JNM1P36224 373 aa2.21□□□□□ -2.06
RRF1YHR038W PEX18P38855 283 aa2.21□□□□□ -2.06
RRF1YHR038W IES5P40060 125 aa2.21□□□□□ -2.06
RRF1YHR038W REE1P40893 198 aa2.21□□□□□ -2.06
RRF1YHR038W PHB1P40961 287 aa2.21□□□□□ -2.06
RRF1YHR038W GCD14P46959 383 aaPredicted RBP2.21□□□□□ -2.06
RRF1YHR038W SNX4P47057 423 aa2.21□□□□□ -2.06
RRF1YHR038W ORM1P53224 222 aa2.21□□□□□ -2.06
RRF1YHR038W TOF1P53840 1238 aa2.21□□□□□ -2.06
RRF1YHR038W HEF3P53978 1044 aaKnown RBP2.21□□□□□ -2.06
RRF1YHR038W YML108WQ03759 105 aa2.21□□□□□ -2.06
RRF1YHR038W RNH1Q04740 348 aa2.21□□□□□ -2.06
RRF1YHR038W DBP9Q06218 594 aaKnown RBP2.21□□□□□ -2.06
RRF1YHR038W OPY2Q06810 360 aa2.21□□□□□ -2.06
RRF1YHR038W MDM36Q06820 579 aa2.21□□□□□ -2.06
RRF1YHR038W RTP1Q12751 981 aa2.21□□□□□ -2.06
RRF1YHR038W YIL002W-AQ3E7Z5 69 aa2.21□□□□□ -2.06
RRF1YHR038W MON2P48563 1636 aaPredicted RBP2.2□□□□□ -2.06
RRF1YHR038W THO2P53552 1597 aaKnown RBP2.2□□□□□ -2.06
RRF1YHR038W SEC53P07283 254 aaKnown RBP2.2□□□□□ -2.06
RRF1YHR038W MRP13P12686 339 aa2.2□□□□□ -2.06
RRF1YHR038W CLN3P13365 580 aa2.2□□□□□ -2.06
RRF1YHR038W KSS1P14681 368 aa2.2□□□□□ -2.06
RRF1YHR038W ISY1P21374 235 aaPredicted RBP2.2□□□□□ -2.06
RRF1YHR038W VPS1P21576 704 aaKnown RBP2.2□□□□□ -2.06
RRF1YHR038W KAR9P32526 644 aa2.2□□□□□ -2.06
RRF1YHR038W GLC7P32598 312 aaKnown RBP2.2□□□□□ -2.06
RRF1YHR038W CSE1P33307 960 aa2.2□□□□□ -2.06
RRF1YHR038W SRL3P36167 246 aa2.2□□□□□ -2.06
RRF1YHR038W REG2P38232 338 aa2.2□□□□□ -2.06
RRF1YHR038W RFS1P38234 210 aaKnown RBP2.2□□□□□ -2.06
RRF1YHR038W RXT2P38255 430 aa2.2□□□□□ -2.06
RRF1YHR038W TMA108P40462 946 aa2.2□□□□□ -2.06
RRF1YHR038W AVT4P50944 713 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 48 ms