RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C FSH1P38777 243 aaKnown RBP2.12□□□□□ -2.07
PRE4YFR050C YIL012WP40551 113 aa2.12□□□□□ -2.07
PRE4YFR050C DJP1P40564 432 aa2.12□□□□□ -2.07
PRE4YFR050C UBP8P50102 471 aa2.12□□□□□ -2.07
PRE4YFR050C IMA1P53051 589 aa2.12□□□□□ -2.07
PRE4YFR050C YPR003CP53394 754 aa2.12□□□□□ -2.07
PRE4YFR050C LSC1P53598 329 aaKnown RBP2.12□□□□□ -2.07
PRE4YFR050C PIR1Q03178 341 aa2.12□□□□□ -2.07
PRE4YFR050C EIS1Q05050 843 aaKnown RBP2.12□□□□□ -2.07
PRE4YFR050C RRP45Q05636 305 aaKnown RBP2.12□□□□□ -2.07
PRE4YFR050C ATG23Q06671 453 aa2.12□□□□□ -2.07
PRE4YFR050C MCH4Q08268 501 aa2.12□□□□□ -2.07
PRE4YFR050C UBX3Q12229 455 aa2.12□□□□□ -2.07
PRE4YFR050C YLR046CQ12253 270 aa2.12□□□□□ -2.07
PRE4YFR050C RRP12Q12754 1228 aaKnown RBP2.12□□□□□ -2.07
PRE4YFR050C MRP2P10663 115 aaPredicted RBP2.11□□□□□ -2.07
PRE4YFR050C TCP1P12612 559 aaKnown RBP2.11□□□□□ -2.07
PRE4YFR050C MNE1P24720 663 aa2.11□□□□□ -2.07
PRE4YFR050C YCP4P25349 247 aaKnown RBP2.11□□□□□ -2.07
PRE4YFR050C LRE1P25579 583 aaKnown RBP2.11□□□□□ -2.07
PRE4YFR050C GEX1P25596 615 aa2.11□□□□□ -2.07
PRE4YFR050C SPR1P32603 445 aa2.11□□□□□ -2.07
PRE4YFR050C SKN1P33336 771 aa2.11□□□□□ -2.07
PRE4YFR050C MUD2P36084 527 aaKnown RBP2.11□□□□□ -2.07
PRE4YFR050C PXL1P36166 706 aa2.11□□□□□ -2.07
PRE4YFR050C GEX2P36173 615 aa2.11□□□□□ -2.07
PRE4YFR050C YGP1P38616 354 aaKnown RBP2.11□□□□□ -2.07
PRE4YFR050C GND1P38720 489 aaKnown RBP2.11□□□□□ -2.07
PRE4YFR050C YHL041WP38730 149 aa2.11□□□□□ -2.07
PRE4YFR050C GAA1P39012 614 aa2.11□□□□□ -2.07
PRE4YFR050C SPC72P39723 622 aa2.11□□□□□ -2.07
PRE4YFR050C SPO73P40031 143 aa2.11□□□□□ -2.07
PRE4YFR050C PUG1P40100 303 aa2.11□□□□□ -2.07
PRE4YFR050C ERR3P42222 437 aa2.11□□□□□ -2.07
PRE4YFR050C LYS20P48570 428 aaKnown RBP2.11□□□□□ -2.07
PRE4YFR050C DCP2P53550 970 aaKnown RBP2.11□□□□□ -2.07
PRE4YFR050C NCS2P53923 493 aaPredicted RBP2.11□□□□□ -2.07
PRE4YFR050C MTQ1P53944 314 aa2.11□□□□□ -2.07
PRE4YFR050C YDR131CQ03899 556 aa2.11□□□□□ -2.07
PRE4YFR050C TDA9Q04545 1251 aa2.11□□□□□ -2.07
PRE4YFR050C BUD7Q08754 746 aa2.11□□□□□ -2.07
PRE4YFR050C SWT1Q12104 458 aa2.11□□□□□ -2.07
PRE4YFR050C TPO4Q12256 659 aa2.11□□□□□ -2.07
PRE4YFR050C YOR111WQ99210 232 aa2.11□□□□□ -2.07
PRE4YFR050C ATP2P00830 511 aaKnown RBP2.1□□□□□ -2.07
PRE4YFR050C HEM2P05373 342 aa2.1□□□□□ -2.07
PRE4YFR050C YKR104WP0CE69 306 aa2.1□□□□□ -2.07
PRE4YFR050C BIK1P11709 440 aa2.1□□□□□ -2.07
PRE4YFR050C SPO16P17122 198 aa2.1□□□□□ -2.07
PRE4YFR050C DAL81P21657 970 aa2.1□□□□□ -2.07
PRE4YFR050C GFD2P25370 566 aaKnown RBP2.1□□□□□ -2.07
PRE4YFR050C MRPL15P36523 253 aa2.1□□□□□ -2.07
PRE4YFR050C CTM1P38818 585 aa2.1□□□□□ -2.07
PRE4YFR050C LYS1P38998 373 aaRIP-Chip data2.1□□□□□ -2.07not detected
PRE4YFR050C TPA1P40032 644 aaKnown RBP2.1□□□□□ -2.07
PRE4YFR050C VRG4P40107 337 aa2.1□□□□□ -2.07
PRE4YFR050C STB2P46679 850 aa2.1□□□□□ -2.07
PRE4YFR050C MSY1P48527 492 aa2.1□□□□□ -2.07
PRE4YFR050C PRM1P53835 661 aa2.1□□□□□ -2.07
PRE4YFR050C VPS71Q03433 280 aa2.1□□□□□ -2.07
PRE4YFR050C SWA2Q06677 668 aa2.1□□□□□ -2.07
PRE4YFR050C GSH2Q08220 491 aa2.1□□□□□ -2.07
PRE4YFR050C YBR138CP38277 524 aa2.09□□□□□ -2.07
PRE4YFR050C DED81P38707 554 aaKnown RBP2.09□□□□□ -2.07
PRE4YFR050C YIL067CP40514 678 aa2.09□□□□□ -2.07
PRE4YFR050C SSU1P41930 458 aa2.09□□□□□ -2.07
PRE4YFR050C MEP2P41948 499 aa2.09□□□□□ -2.07
PRE4YFR050C GIP3Q03016 1276 aa2.09□□□□□ -2.07
PRE4YFR050C PFA5Q03289 374 aa2.09□□□□□ -2.07
PRE4YFR050C SWF1Q04629 336 aa2.09□□□□□ -2.07
PRE4YFR050C YMR034CQ05131 434 aaPredicted RBP2.09□□□□□ -2.07
PRE4YFR050C TEN1Q07921 160 aa2.09□□□□□ -2.07
PRE4YFR050C DDC1Q08949 612 aa2.09□□□□□ -2.07
PRE4YFR050C NBP2Q12163 236 aa2.09□□□□□ -2.07
PRE4YFR050C YRM1Q12340 786 aa2.09□□□□□ -2.07
PRE4YFR050C UBR1P19812 1950 aa2.09□□□□□ -2.08
PRE4YFR050C YER145C-AA0A023PYF4 145 aa2.08□□□□□ -2.08
PRE4YFR050C RPS19AP07280 144 aaKnown RBP2.08□□□□□ -2.08
PRE4YFR050C RPS19BP07281 144 aaPredicted RBP2.08□□□□□ -2.08
PRE4YFR050C GPA1P08539 472 aa2.08□□□□□ -2.08
PRE4YFR050C YML003WP0CF16 290 aa2.08□□□□□ -2.08
PRE4YFR050C RPL42AP0CX27 106 aaKnown RBP2.08□□□□□ -2.08
PRE4YFR050C RPL42BP0CX28 106 aaKnown RBP2.08□□□□□ -2.08
PRE4YFR050C PCT1P13259 424 aa2.08□□□□□ -2.08
PRE4YFR050C YME1P32795 747 aa2.08□□□□□ -2.08
PRE4YFR050C KDX1P36005 433 aa2.08□□□□□ -2.08
PRE4YFR050C ADE17P38009 592 aaKnown RBP2.08□□□□□ -2.08
PRE4YFR050C ARC40P38328 384 aaKnown RBP2.08□□□□□ -2.08
PRE4YFR050C NPR3P38742 1146 aa2.08□□□□□ -2.08
PRE4YFR050C BZZ1P38822 633 aa2.08□□□□□ -2.08
PRE4YFR050C RCY1P39531 840 aa2.08□□□□□ -2.08
PRE4YFR050C PHM8P40025 321 aa2.08□□□□□ -2.08
PRE4YFR050C MRX1P40050 688 aa2.08□□□□□ -2.08
PRE4YFR050C YER188WP40103 239 aa2.08□□□□□ -2.08
PRE4YFR050C YIL169CP40442 995 aa2.08□□□□□ -2.08
PRE4YFR050C GLG2P47011 380 aa2.08□□□□□ -2.08
PRE4YFR050C COG1P53079 417 aa2.08□□□□□ -2.08
PRE4YFR050C UBX4P54730 416 aa2.08□□□□□ -2.08
PRE4YFR050C MRPL13Q02204 264 aa2.08□□□□□ -2.08
PRE4YFR050C IZH1Q03419 316 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms