RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	ACO2	P39533	789 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	FMP52	P40008	231 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	VMA13	P41807	478 aa	Known RBP	5.29	□□□□□ -1.56
VTC2	YFL004W	LSB6	P42951	607 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	GYP8	P43570	497 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	SSY5	P47002	699 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	YJR141W	P47172	347 aa	Predicted RBP	5.29	□□□□□ -1.56
VTC2	YFL004W	HXT16	P47185	567 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	PMT5	P52867	743 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	AIM14	P53109	570 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	SCW11	P53189	542 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	RPT4	P53549	437 aa	Known RBP	5.29	□□□□□ -1.56
VTC2	YFL004W	INN1	P53901	409 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	LSM3	P57743	89 aa	Known RBP	5.29	□□□□□ -1.56
VTC2	YFL004W	TIM44	Q01852	431 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	PRM15	Q03262	622 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	RAD33	Q04231	177 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	CDC123	Q05791	360 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	WHI4	Q07655	649 aa	Known RBP	5.29	□□□□□ -1.56
VTC2	YFL004W	SLF1	Q12034	447 aa	Known RBP	5.29	□□□□□ -1.56
VTC2	YFL004W	YPR063C	Q12160	140 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	ECM3	Q99252	613 aa		5.29	□□□□□ -1.56
VTC2	YFL004W	ERR1	P0CX10	437 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	ERR2	P0CX11	437 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	MAS1	P10507	462 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	FRS1	P15624	595 aa	Known RBP	5.28	□□□□□ -1.56
VTC2	YFL004W	FUS3	P16892	353 aa	Known RBP	5.28	□□□□□ -1.56
VTC2	YFL004W	AAC3	P18238	307 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	PDR3	P33200	976 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	PPE1	P38796	400 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	GEP4	P38812	185 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	ERR3	P42222	437 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	MNT2	P53059	558 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	RRT6	P53117	311 aa	Predicted RBP	5.28	□□□□□ -1.56
VTC2	YFL004W	YGR053C	P53234	283 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	YPR003C	P53394	754 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	ALG11	P53954	548 aa	Known RBP	5.28	□□□□□ -1.56
VTC2	YFL004W	CDC55	Q00362	526 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	YLR345W	Q06137	509 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	FMP40	Q08968	688 aa	Predicted RBP	5.28	□□□□□ -1.56
VTC2	YFL004W	AEP3	Q12089	606 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	FLP1	P03870	423 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	ALG7	P07286	448 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	ART10	P18634	518 aa	Known RBP	5.28	□□□□□ -1.56
VTC2	YFL004W	SED4	P25365	1065 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	PEX34	P25584	144 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	ITR1	P30605	584 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	PAH1	P32567	862 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	PES4	P39684	611 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	MAD2	P40958	196 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	PTR3	P43606	678 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	MPS3	P47069	682 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	ARH1	P48360	493 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	YGL036W	P53185	909 aa	Predicted RBP	5.28	□□□□□ -1.56
VTC2	YFL004W	LSB1	P53281	241 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	HXT11	P54862	567 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	ARV1	Q06541	321 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	RAD34	Q06665	692 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	YLR413W	Q06689	675 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	CDA2	Q06703	312 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	FRE3	Q08905	711 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	PNS1	Q12412	539 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	RTN2	Q12443	393 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	SUS1	Q6WNK7	96 aa		5.28	□□□□□ -1.56
VTC2	YFL004W	YER152C	P10356	443 aa		5.27	□□□□□ -1.57
VTC2	YFL004W	DBR1	P24309	405 aa	Known RBP	5.27	□□□□□ -1.57
VTC2	YFL004W	SYP1	P25623	870 aa	Known RBP	5.27	□□□□□ -1.57
VTC2	YFL004W	SYN8	P31377	255 aa		5.27	□□□□□ -1.57
VTC2	YFL004W	ISC10	P32645	267 aa		5.27	□□□□□ -1.57
VTC2	YFL004W	PGM1	P33401	570 aa	Known RBP	5.27	□□□□□ -1.57
VTC2	YFL004W	BAP2	P38084	609 aa		5.27	□□□□□ -1.57
VTC2	YFL004W	NDT80	P38830	627 aa		5.27	□□□□□ -1.57
VTC2	YFL004W	PAC1	P39946	494 aa	Known RBP	5.27	□□□□□ -1.57
VTC2	YFL004W	FOL2	P51601	243 aa	Known RBP	5.27	□□□□□ -1.57
VTC2	YFL004W	TAM41	P53230	385 aa		5.27	□□□□□ -1.57
VTC2	YFL004W	LSM7	P53905	115 aa	Known RBP	5.27	□□□□□ -1.57
VTC2	YFL004W	NUP116	Q02630	1113 aa		5.27	□□□□□ -1.57
VTC2	YFL004W	BMT6	Q12291	365 aa		5.27	□□□□□ -1.57
VTC2	YFL004W	TY1A-DR3	Q12441	440 aa		5.27	□□□□□ -1.57
VTC2	YFL004W	ISN1	Q99312	450 aa		5.27	□□□□□ -1.57
VTC2	YFL004W	TDH1	P00360	332 aa	Known RBP	5.26	□□□□□ -1.57
VTC2	YFL004W	HOM2	P13663	365 aa	Known RBP	5.26	□□□□□ -1.57
VTC2	YFL004W	GUK1	P15454	187 aa	Known RBP	5.26	□□□□□ -1.57
VTC2	YFL004W	SRM1	P21827	482 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.26	□□□□□ -1.57	not detected
VTC2	YFL004W	SIP1	P32578	815 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	MGE1	P38523	228 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	QNS1	P38795	714 aa	Known RBP	5.26	□□□□□ -1.57
VTC2	YFL004W	NSG1	P38837	291 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	YHR182W	P38870	785 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	RMD6	P39975	231 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	COG3	P40094	801 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	YJL043W	P47053	257 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	ACF4	P47129	309 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	MKC7	P53379	596 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	RCO1	Q04779	684 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	IRC3	Q06683	689 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	SYT1	Q06836	1226 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	YDL086W	Q07505	273 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	BUD20	Q08004	166 aa	Predicted RBP	5.26	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms