RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C SPC110P32380 944 aa2.93□□□□□ -1.94
MSH4YFL003C NIP1P32497 812 aaKnown RBP2.93□□□□□ -1.94
MSH4YFL003C SHP1P34223 423 aa2.93□□□□□ -1.94
MSH4YFL003C PCA1P38360 1216 aa2.93□□□□□ -1.94
MSH4YFL003C ZPR1P53303 486 aaKnown RBP2.93□□□□□ -1.94
MSH4YFL003C HST1P53685 503 aa2.93□□□□□ -1.94
MSH4YFL003C ARP10Q04549 284 aa2.93□□□□□ -1.94
MSH4YFL003C PML1Q07930 204 aaPredicted RBP2.93□□□□□ -1.94
MSH4YFL003C MES1P00958 751 aaKnown RBP2.93□□□□□ -1.94
MSH4YFL003C AMD1P15274 810 aaKnown RBP2.93□□□□□ -1.94
MSH4YFL003C SUI2P20459 304 aaKnown RBP2.93□□□□□ -1.94
MSH4YFL003C SPE2P21182 396 aa2.93□□□□□ -1.94
MSH4YFL003C AIM17P23180 465 aaKnown RBP2.93□□□□□ -1.94
MSH4YFL003C RTT105P40063 208 aa2.93□□□□□ -1.94
MSH4YFL003C YPT11P48559 417 aa2.93□□□□□ -1.94
MSH4YFL003C RPT4P53549 437 aaKnown RBP2.93□□□□□ -1.94
MSH4YFL003C SMM1P53720 384 aaKnown RBP2.93□□□□□ -1.94
MSH4YFL003C PDR16P53860 351 aaKnown RBP2.93□□□□□ -1.94
MSH4YFL003C SKO1Q02100 647 aa2.93□□□□□ -1.94
MSH4YFL003C SLK19Q08581 821 aaKnown RBP2.93□□□□□ -1.94
MSH4YFL003C CFT2Q12102 859 aaPredicted RBP2.93□□□□□ -1.94
MSH4YFL003C HOM2P13663 365 aaKnown RBP2.92□□□□□ -1.94
MSH4YFL003C HIR2P32480 875 aa2.92□□□□□ -1.94
MSH4YFL003C SUR1P33300 382 aa2.92□□□□□ -1.94
MSH4YFL003C ROT2P38138 954 aa2.92□□□□□ -1.94
MSH4YFL003C CHS6P40955 746 aa2.92□□□□□ -1.94
MSH4YFL003C RHO5P53879 331 aaKnown RBP2.92□□□□□ -1.94
MSH4YFL003C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
MSH4YFL003C VPS54Q12071 889 aa2.92□□□□□ -1.94
MSH4YFL003C PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
MSH4YFL003C YML133CQ03099 1374 aa2.92□□□□□ -1.94
MSH4YFL003C YLL067CQ07888 1374 aa2.92□□□□□ -1.94
MSH4YFL003C YLL066CQ99208 1374 aa2.92□□□□□ -1.94
MSH4YFL003C RPL6BP05739 176 aaKnown RBP2.92□□□□□ -1.94
MSH4YFL003C MDM10P18409 493 aa2.92□□□□□ -1.94
MSH4YFL003C ILV6P25605 309 aaKnown RBP2.92□□□□□ -1.94
MSH4YFL003C AFG1P32317 509 aa2.92□□□□□ -1.94
MSH4YFL003C PCH2P38126 564 aa2.92□□□□□ -1.94
MSH4YFL003C BNA4P38169 460 aa2.92□□□□□ -1.94
MSH4YFL003C GDT1P38301 280 aaPredicted RBP2.92□□□□□ -1.94
MSH4YFL003C MLH1P38920 769 aa2.92□□□□□ -1.94
MSH4YFL003C OSW5P40219 148 aa2.92□□□□□ -1.94
MSH4YFL003C RPL6AQ02326 176 aaKnown RBP2.92□□□□□ -1.94
MSH4YFL003C SMA1Q02651 245 aa2.92□□□□□ -1.94
MSH4YFL003C VTC3Q02725 835 aa2.92□□□□□ -1.94
MSH4YFL003C PPM1Q04081 328 aa2.92□□□□□ -1.94
MSH4YFL003C RRP45Q05636 305 aaKnown RBP2.92□□□□□ -1.94
MSH4YFL003C RTC5Q12108 567 aaKnown RBP2.92□□□□□ -1.94
MSH4YFL003C CRC1Q12289 327 aa2.92□□□□□ -1.94
MSH4YFL003C YCR022CP25620 114 aa2.91□□□□□ -1.94
MSH4YFL003C PPQ1P32945 549 aa2.91□□□□□ -1.94
MSH4YFL003C RIB7P33312 244 aa2.91□□□□□ -1.94
MSH4YFL003C WSS1P38838 269 aa2.91□□□□□ -1.94
MSH4YFL003C YJL132WP47014 750 aa2.91□□□□□ -1.94
MSH4YFL003C URB2P47108 1174 aa2.91□□□□□ -1.94
MSH4YFL003C UBP8P50102 471 aa2.91□□□□□ -1.94
MSH4YFL003C YGL138CP53122 345 aa2.91□□□□□ -1.94
MSH4YFL003C ARK1P53974 638 aa2.91□□□□□ -1.94
MSH4YFL003C SLD5Q03406 294 aa2.91□□□□□ -1.94
MSH4YFL003C THI7Q05998 598 aa2.91□□□□□ -1.94
MSH4YFL003C SPH1Q06160 661 aa2.91□□□□□ -1.94
MSH4YFL003C PHO92Q06390 306 aa2.91□□□□□ -1.94
MSH4YFL003C NOP6Q07623 225 aaKnown RBP2.91□□□□□ -1.94
MSH4YFL003C THI20Q08224 551 aa2.91□□□□□ -1.94
MSH4YFL003C MDY2Q12285 212 aa2.91□□□□□ -1.94
MSH4YFL003C YBT1P32386 1661 aa2.91□□□□□ -1.94
MSH4YFL003C NUP188P52593 1655 aaKnown RBP2.91□□□□□ -1.94
MSH4YFL003C SPO7P18410 259 aa2.91□□□□□ -1.94
MSH4YFL003C UTR4P32626 227 aa2.91□□□□□ -1.94
MSH4YFL003C PDR3P33200 976 aa2.91□□□□□ -1.94
MSH4YFL003C NTC20P38302 140 aaPredicted RBP2.91□□□□□ -1.94
MSH4YFL003C OCA2P53949 197 aa2.91□□□□□ -1.94
MSH4YFL003C SHR3Q02774 210 aa2.91□□□□□ -1.94
MSH4YFL003C IZH1Q03419 316 aa2.91□□□□□ -1.94
MSH4YFL003C POS5Q06892 414 aa2.91□□□□□ -1.94
MSH4YFL003C ATX2Q12067 313 aa2.91□□□□□ -1.94
MSH4YFL003C VAM3Q12241 283 aa2.91□□□□□ -1.94
MSH4YFL003C NDJ1Q12366 352 aa2.91□□□□□ -1.94
MSH4YFL003C TYR1P20049 452 aa2.9□□□□□ -1.94
MSH4YFL003C DBP3P20447 523 aaKnown RBP2.9□□□□□ -1.94
MSH4YFL003C GID7P25569 745 aa2.9□□□□□ -1.94
MSH4YFL003C DAL80P26343 269 aa2.9□□□□□ -1.94
MSH4YFL003C FUN19P28003 413 aaPredicted RBP2.9□□□□□ -1.94
MSH4YFL003C YKL023WP36103 277 aaKnown RBP2.9□□□□□ -1.94
MSH4YFL003C YDR089WP38966 869 aa2.9□□□□□ -1.94
MSH4YFL003C SAS2P40963 338 aa2.9□□□□□ -1.94
MSH4YFL003C ALK1P43633 760 aaKnown RBP2.9□□□□□ -1.94
MSH4YFL003C TRS85P46944 698 aa2.9□□□□□ -1.94
MSH4YFL003C RPN9Q04062 393 aaKnown RBP2.9□□□□□ -1.94
MSH4YFL003C CDC45Q08032 650 aa2.9□□□□□ -1.94
MSH4YFL003C UBX3Q12229 455 aa2.9□□□□□ -1.94
MSH4YFL003C MRS3P10566 314 aa2.9□□□□□ -1.95
MSH4YFL003C RAD14P28519 371 aa2.9□□□□□ -1.95
MSH4YFL003C SRB2P34162 210 aa2.9□□□□□ -1.95
MSH4YFL003C LAG1P38703 411 aa2.9□□□□□ -1.95
MSH4YFL003C TOM71P38825 639 aaKnown RBP2.9□□□□□ -1.95
MSH4YFL003C YTA12P40341 825 aa2.9□□□□□ -1.95
MSH4YFL003C VHS2P40463 436 aa2.9□□□□□ -1.95
MSH4YFL003C TFG2P41896 400 aaPredicted RBP2.9□□□□□ -1.95
MSH4YFL003C SNO3P43544 222 aa2.9□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms