RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	GPM3	Q12326	303 aa		4.16	□□□□□ -1.74
UBC8	YEL012W	CYR1	P08678	2026 aa	Known RBP	4.16	□□□□□ -1.74
UBC8	YEL012W	SEC16	P48415	2195 aa	Known RBP	4.15	□□□□□ -1.75
UBC8	YEL012W	ATP2	P00830	511 aa	Known RBP	4.15	□□□□□ -1.75
UBC8	YEL012W	RPL7A	P05737	244 aa	Known RBP	4.15	□□□□□ -1.75
UBC8	YEL012W	RRP43	P25359	394 aa	Predicted RBP	4.15	□□□□□ -1.75
UBC8	YEL012W	GFD2	P25370	566 aa	Known RBP	4.15	□□□□□ -1.75
UBC8	YEL012W	DMC1	P25453	334 aa		4.15	□□□□□ -1.75
UBC8	YEL012W	RFA2	P26754	273 aa	Known RBP	4.15	□□□□□ -1.75
UBC8	YEL012W	YJU2	P28320	278 aa	Predicted RBP	4.15	□□□□□ -1.75
UBC8	YEL012W	YIR014W	P40570	242 aa		4.15	□□□□□ -1.75
UBC8	YEL012W	UPF3	P48412	387 aa	Known RBP	4.15	□□□□□ -1.75
UBC8	YEL012W	YGL260W	P53056	76 aa		4.15	□□□□□ -1.75
UBC8	YEL012W	GIS1	Q03833	894 aa		4.15	□□□□□ -1.75
UBC8	YEL012W	RAD33	Q04231	177 aa		4.15	□□□□□ -1.75
UBC8	YEL012W	EMI1	Q04406	187 aa		4.15	□□□□□ -1.75
UBC8	YEL012W	APL5	Q08951	932 aa	Known RBP	4.15	□□□□□ -1.75
UBC8	YEL012W	PGC1	Q08959	321 aa		4.15	□□□□□ -1.75
UBC8	YEL012W	VPS68	Q12016	184 aa		4.15	□□□□□ -1.75
UBC8	YEL012W	RPL7B	Q12213	244 aa	Known RBP	4.15	□□□□□ -1.75
UBC8	YEL012W	SEC39	Q12745	709 aa		4.15	□□□□□ -1.75
UBC8	YEL012W	EFG1	Q3E705	233 aa	Known RBP	4.15	□□□□□ -1.75
UBC8	YEL012W	VCX1	Q99385	411 aa		4.15	□□□□□ -1.75
UBC8	YEL012W	IPP1	P00817	287 aa	Known RBP	4.14	□□□□□ -1.75
UBC8	YEL012W	RPB2	P08518	1224 aa	Known RBP	4.14	□□□□□ -1.75
UBC8	YEL012W	SAN1	P22470	610 aa		4.14	□□□□□ -1.75
UBC8	YEL012W	UBA1	P22515	1024 aa	Known RBP	4.14	□□□□□ -1.75
UBC8	YEL012W	DCC1	P25559	380 aa		4.14	□□□□□ -1.75
UBC8	YEL012W	MRP20	P32387	263 aa		4.14	□□□□□ -1.75
UBC8	YEL012W	SEF1	P34228	1148 aa		4.14	□□□□□ -1.75
UBC8	YEL012W	PIM1	P36775	1133 aa		4.14	□□□□□ -1.75
UBC8	YEL012W	ARA1	P38115	344 aa		4.14	□□□□□ -1.75
UBC8	YEL012W	SRP72	P38688	640 aa	Known RBP	4.14	□□□□□ -1.75
UBC8	YEL012W	OTU2	P38747	307 aa	Known RBP	4.14	□□□□□ -1.75
UBC8	YEL012W	RTT107	P38850	1070 aa		4.14	□□□□□ -1.75
UBC8	YEL012W	SMF1	P38925	575 aa		4.14	□□□□□ -1.75
UBC8	YEL012W	ERP2	P39704	215 aa		4.14	□□□□□ -1.75
UBC8	YEL012W	MKT1	P40850	830 aa	Known RBP	4.14	□□□□□ -1.75
UBC8	YEL012W	TDA10	P42938	290 aa		4.14	□□□□□ -1.75
UBC8	YEL012W	ROK1	P45818	564 aa	Predicted RBP	4.14	□□□□□ -1.75
UBC8	YEL012W	SIP4	P46954	829 aa		4.14	□□□□□ -1.75
UBC8	YEL012W	TCB2	P48231	1178 aa		4.14	□□□□□ -1.75
UBC8	YEL012W	YNL143C	P53908	130 aa		4.14	□□□□□ -1.75
UBC8	YEL012W	SXM1	Q04175	944 aa	Known RBP	4.14	□□□□□ -1.75
UBC8	YEL012W	MCP2	Q06567	569 aa		4.14	□□□□□ -1.75
UBC8	YEL012W	YOR338W	Q99326	363 aa		4.14	□□□□□ -1.75
UBC8	YEL012W	FAS1	P07149	2051 aa	Known RBP	4.14	□□□□□ -1.75
UBC8	YEL012W	FUM1	P08417	488 aa	Known RBP	4.13	□□□□□ -1.75
UBC8	YEL012W	HSC82	P15108	705 aa	Known RBP	4.13	□□□□□ -1.75
UBC8	YEL012W	CDC43	P18898	376 aa		4.13	□□□□□ -1.75
UBC8	YEL012W	SCL1	P21243	252 aa	Known RBP	4.13	□□□□□ -1.75
UBC8	YEL012W	EPT1	P22140	391 aa		4.13	□□□□□ -1.75
UBC8	YEL012W	ERG8	P24521	451 aa		4.13	□□□□□ -1.75
UBC8	YEL012W	YSP3	P25036	478 aa		4.13	□□□□□ -1.75
UBC8	YEL012W	MEI4	P29467	408 aa		4.13	□□□□□ -1.75
UBC8	YEL012W	MRPL9	P31334	269 aa		4.13	□□□□□ -1.75
UBC8	YEL012W	YMC1	P32331	307 aa		4.13	□□□□□ -1.75
UBC8	YEL012W	CNS1	P33313	385 aa		4.13	□□□□□ -1.75
UBC8	YEL012W	IML3	P38265	245 aa		4.13	□□□□□ -1.75
UBC8	YEL012W	TDP1	P38319	544 aa		4.13	□□□□□ -1.75
UBC8	YEL012W	DED81	P38707	554 aa	Known RBP	4.13	□□□□□ -1.75
UBC8	YEL012W	LNP1	P38878	278 aa		4.13	□□□□□ -1.75
UBC8	YEL012W	AIM18	P38884	321 aa		4.13	□□□□□ -1.75
UBC8	YEL012W	CYC2	P38909	366 aa		4.13	□□□□□ -1.75
UBC8	YEL012W	YAL037W	P39728	267 aa		4.13	□□□□□ -1.75
UBC8	YEL012W	SAP1	P39955	897 aa	Known RBP	4.13	□□□□□ -1.75
UBC8	YEL012W	YEL020C	P39994	560 aa		4.13	□□□□□ -1.75
UBC8	YEL012W	NOP16	P40007	231 aa	Known RBP	4.13	□□□□□ -1.75
UBC8	YEL012W	RIC1	P40395	1056 aa		4.13	□□□□□ -1.75
UBC8	YEL012W	QRI1	P43123	477 aa	Known RBP	4.13	□□□□□ -1.75
UBC8	YEL012W	YJL132W	P47014	750 aa		4.13	□□□□□ -1.75
UBC8	YEL012W	STR3	P53101	465 aa	Known RBP	4.13	□□□□□ -1.75
UBC8	YEL012W	SUR7	P54003	302 aa		4.13	□□□□□ -1.75
UBC8	YEL012W	EGD1	Q02642	157 aa	Known RBP	4.13	□□□□□ -1.75
UBC8	YEL012W	RSM10	Q03201	203 aa		4.13	□□□□□ -1.75
UBC8	YEL012W	ARX1	Q03862	593 aa	Known RBP	4.13	□□□□□ -1.75
UBC8	YEL012W	RCO1	Q04779	684 aa		4.13	□□□□□ -1.75
UBC8	YEL012W	ARP9	Q05123	467 aa		4.13	□□□□□ -1.75
UBC8	YEL012W	SMF3	Q12078	473 aa	Predicted RBP	4.13	□□□□□ -1.75
UBC8	YEL012W	YDR262W	Q12331	272 aa		4.13	□□□□□ -1.75
UBC8	YEL012W	SEY1	Q99287	776 aa		4.13	□□□□□ -1.75
UBC8	YEL012W	AAC3	P18238	307 aa		4.12	□□□□□ -1.75
UBC8	YEL012W	CLN1	P20437	546 aa		4.12	□□□□□ -1.75
UBC8	YEL012W	PTP1	P25044	335 aa		4.12	□□□□□ -1.75
UBC8	YEL012W	AEP1	P32493	518 aa		4.12	□□□□□ -1.75
UBC8	YEL012W	NUP120	P35729	1037 aa		4.12	□□□□□ -1.75
UBC8	YEL012W	HES1	P35843	434 aa		4.12	□□□□□ -1.75
UBC8	YEL012W	YBP1	P38315	674 aa		4.12	□□□□□ -1.75
UBC8	YEL012W	PCA1	P38360	1216 aa		4.12	□□□□□ -1.75
UBC8	YEL012W	MSR1	P38714	643 aa		4.12	□□□□□ -1.75
UBC8	YEL012W	FLC2	P39719	783 aa		4.12	□□□□□ -1.75
UBC8	YEL012W	YEL068C	P39977	110 aa		4.12	□□□□□ -1.75
UBC8	YEL012W	DJP1	P40564	432 aa		4.12	□□□□□ -1.75
UBC8	YEL012W	IST3	P40565	148 aa	Predicted RBP	4.12	□□□□□ -1.75
UBC8	YEL012W	IKS1	P47042	667 aa		4.12	□□□□□ -1.75
UBC8	YEL012W	MSY1	P48527	492 aa		4.12	□□□□□ -1.75
UBC8	YEL012W	YGL108C	P53139	140 aa		4.12	□□□□□ -1.75
UBC8	YEL012W	ARE2	P53629	642 aa	Known RBP	4.12	□□□□□ -1.75
UBC8	YEL012W	VPS9	P54787	451 aa		4.12	□□□□□ -1.75
UBC8	YEL012W	IVY1	Q04934	453 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 146.8 ms