RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM6, Length 261 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM6	YDR378C	YHR054C	P38780	354 aa		4.63	□□□□□ -1.67
LSM6	YDR378C	SAS2	P40963	338 aa		4.63	□□□□□ -1.67
LSM6	YDR378C	YJR011C	P47086	261 aa	Predicted RBP	4.63	□□□□□ -1.67
LSM6	YDR378C	YIP1	P53039	248 aa		4.63	□□□□□ -1.67
LSM6	YDR378C	ODC1	Q03028	310 aa		4.63	□□□□□ -1.67
LSM6	YDR378C	PIR3	Q03180	325 aa		4.63	□□□□□ -1.67
LSM6	YDR378C	YMR130W	Q04223	302 aa		4.63	□□□□□ -1.67
LSM6	YDR378C	MUM3	Q08750	479 aa		4.63	□□□□□ -1.67
LSM6	YDR378C	VPS54	Q12071	889 aa		4.63	□□□□□ -1.67
LSM6	YDR378C	CTF3	Q12748	733 aa		4.63	□□□□□ -1.67
LSM6	YDR378C	LPD1	P09624	499 aa	Known RBP	4.62	□□□□□ -1.67
LSM6	YDR378C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
LSM6	YDR378C	ECM25	P32525	599 aa		4.62	□□□□□ -1.67
LSM6	YDR378C	GLC7	P32598	312 aa	Known RBP	4.62	□□□□□ -1.67
LSM6	YDR378C	PEX5	P35056	612 aa		4.62	□□□□□ -1.67
LSM6	YDR378C	YCR041W	P37265	110 aa		4.62	□□□□□ -1.67
LSM6	YDR378C	AVT4	P50944	713 aa		4.62	□□□□□ -1.67
LSM6	YDR378C	COS10	P52924	374 aa		4.62	□□□□□ -1.67
LSM6	YDR378C	POP6	P53218	158 aa		4.62	□□□□□ -1.67
LSM6	YDR378C	CIK1	Q01649	594 aa		4.62	□□□□□ -1.67
LSM6	YDR378C	MED2	Q12124	431 aa		4.62	□□□□□ -1.67
LSM6	YDR378C	HEM2	P05373	342 aa		4.61	□□□□□ -1.67
LSM6	YDR378C	HIP1	P06775	603 aa		4.61	□□□□□ -1.67
LSM6	YDR378C	HOM3	P10869	527 aa		4.61	□□□□□ -1.67
LSM6	YDR378C	SEC63	P14906	663 aa		4.61	□□□□□ -1.67
LSM6	YDR378C	PUT3	P25502	979 aa	Predicted RBP	4.61	□□□□□ -1.67
LSM6	YDR378C	YBP1	P38315	674 aa		4.61	□□□□□ -1.67
LSM6	YDR378C	RRT2	P38332	387 aa		4.61	□□□□□ -1.67
LSM6	YDR378C	TRS85	P46944	698 aa		4.61	□□□□□ -1.67
LSM6	YDR378C	YDL186W	P48568	277 aa		4.61	□□□□□ -1.67
LSM6	YDR378C	RSC1	P53236	928 aa		4.61	□□□□□ -1.67
LSM6	YDR378C	CAF40	P53829	373 aa		4.61	□□□□□ -1.67
LSM6	YDR378C	ACL4	Q03771	387 aa		4.61	□□□□□ -1.67
LSM6	YDR378C	DIS3	Q08162	1001 aa	Known RBP	4.61	□□□□□ -1.67
LSM6	YDR378C	REX4	Q08237	289 aa		4.61	□□□□□ -1.67
LSM6	YDR378C	RKM1	Q08961	583 aa	Predicted RBP	4.61	□□□□□ -1.67
LSM6	YDR378C	LOS1	P33418	1100 aa	Predicted RBP	4.6	□□□□□ -1.67
LSM6	YDR378C	SLM4	P38247	162 aa		4.6	□□□□□ -1.67
LSM6	YDR378C	RFC3	P38629	340 aa		4.6	□□□□□ -1.67
LSM6	YDR378C	TCB2	P48231	1178 aa		4.6	□□□□□ -1.67
LSM6	YDR378C	RPT4	P53549	437 aa	Known RBP	4.6	□□□□□ -1.67
LSM6	YDR378C	DCS1	Q06151	350 aa		4.6	□□□□□ -1.67
LSM6	YDR378C	YPL199C	Q08954	240 aa		4.6	□□□□□ -1.67
LSM6	YDR378C	YBR298C-A	Q8TGK4	73 aa		4.6	□□□□□ -1.67
LSM6	YDR378C	CLN1	P20437	546 aa		4.59	□□□□□ -1.67
LSM6	YDR378C	GCD10	P41814	478 aa		4.59	□□□□□ -1.67
LSM6	YDR378C	SSN8	P47821	323 aa		4.59	□□□□□ -1.67
LSM6	YDR378C	ARK1	P53974	638 aa		4.59	□□□□□ -1.67
LSM6	YDR378C	SXM1	Q04175	944 aa	Known RBP	4.59	□□□□□ -1.67
LSM6	YDR378C	MDM30	Q05930	598 aa		4.59	□□□□□ -1.67
LSM6	YDR378C	MMR1	Q06324	491 aa		4.59	□□□□□ -1.67
LSM6	YDR378C	YMR230W-A	Q3E7B5	62 aa		4.59	□□□□□ -1.67
LSM6	YDR378C	CPR1	P14832	162 aa	Known RBP	4.58	□□□□□ -1.68
LSM6	YDR378C	SPO7	P18410	259 aa		4.58	□□□□□ -1.68
LSM6	YDR378C	AGA1	P32323	725 aa		4.58	□□□□□ -1.68
LSM6	YDR378C	LYS1	P38998	373 aa	RIP-Chip data	4.58	□□□□□ -1.68	not detected
LSM6	YDR378C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
LSM6	YDR378C	YGR111W	P53265	400 aa		4.58	□□□□□ -1.68
LSM6	YDR378C	VPS9	P54787	451 aa		4.58	□□□□□ -1.68
LSM6	YDR378C	MRP51	Q02950	344 aa		4.58	□□□□□ -1.68
LSM6	YDR378C	SCEI	P03882	235 aa		4.57	□□□□□ -1.68
LSM6	YDR378C	MRP4	P32902	394 aa		4.57	□□□□□ -1.68
LSM6	YDR378C	SOR1	P35497	357 aa	Known RBP	4.57	□□□□□ -1.68
LSM6	YDR378C	IDP2	P41939	412 aa		4.57	□□□□□ -1.68
LSM6	YDR378C	YJL132W	P47014	750 aa		4.57	□□□□□ -1.68
LSM6	YDR378C	HMS2	P47175	358 aa		4.57	□□□□□ -1.68
LSM6	YDR378C	FRE4	P53746	719 aa		4.57	□□□□□ -1.68
LSM6	YDR378C	WSC2	P53832	503 aa		4.57	□□□□□ -1.68
LSM6	YDR378C	GYL1	Q04322	720 aa		4.57	□□□□□ -1.68
LSM6	YDR378C	SOR2	Q07786	357 aa		4.57	□□□□□ -1.68
LSM6	YDR378C	AEP3	Q12089	606 aa		4.57	□□□□□ -1.68
LSM6	YDR378C	BUG1	Q12191	341 aa		4.57	□□□□□ -1.68
LSM6	YDR378C	PKH2	Q12236	1081 aa	Known RBP	4.57	□□□□□ -1.68
LSM6	YDR378C	ARG4	P04076	463 aa	Predicted RBP	4.56	□□□□□ -1.68
LSM6	YDR378C	PHO2	P07269	559 aa		4.56	□□□□□ -1.68
LSM6	YDR378C	SAM1	P10659	382 aa	Known RBP	4.56	□□□□□ -1.68
LSM6	YDR378C	SAM2	P19358	384 aa	Known RBP	4.56	□□□□□ -1.68
LSM6	YDR378C	GEX1	P25596	615 aa		4.56	□□□□□ -1.68
LSM6	YDR378C	TIP1	P27654	210 aa	Predicted RBP	4.56	□□□□□ -1.68
LSM6	YDR378C	RRN10	P38204	145 aa		4.56	□□□□□ -1.68
LSM6	YDR378C	YFL067W	P43537	175 aa		4.56	□□□□□ -1.68
LSM6	YDR378C	RRT5	P43607	289 aa		4.56	□□□□□ -1.68
LSM6	YDR378C	SGT1	Q08446	395 aa		4.56	□□□□□ -1.68
LSM6	YDR378C	DCI1	Q08558	271 aa		4.56	□□□□□ -1.68
LSM6	YDR378C	TIM18	Q08749	192 aa		4.56	□□□□□ -1.68
LSM6	YDR378C	YPR022C	Q12139	1133 aa		4.56	□□□□□ -1.68
LSM6	YDR378C	MTR10	Q99189	972 aa		4.56	□□□□□ -1.68
LSM6	YDR378C	TY1B-A	O13527	1196 aa	Known RBP	4.55	□□□□□ -1.68
LSM6	YDR378C	CDC60	P26637	1090 aa	Known RBP	4.55	□□□□□ -1.68
LSM6	YDR378C	SMY1	P32364	656 aa	Known RBP	4.55	□□□□□ -1.68
LSM6	YDR378C	NAT2	P37293	288 aa		4.55	□□□□□ -1.68
LSM6	YDR378C	LRP1	P38801	184 aa	Known RBP	4.55	□□□□□ -1.68
LSM6	YDR378C	MKT1	P40850	830 aa	Known RBP	4.55	□□□□□ -1.68
LSM6	YDR378C	LAM5	P43560	674 aa		4.55	□□□□□ -1.68
LSM6	YDR378C	MSO1	P53604	210 aa	Known RBP	4.55	□□□□□ -1.68
LSM6	YDR378C	RTT103	Q05543	409 aa		4.55	□□□□□ -1.68
LSM6	YDR378C	HEL2	Q05580	639 aa	Known RBP	4.55	□□□□□ -1.68
LSM6	YDR378C	HNT3	Q08702	217 aa		4.55	□□□□□ -1.68
LSM6	YDR378C	YLL056C	Q12177	298 aa		4.55	□□□□□ -1.68
LSM6	YDR378C	GPM3	Q12326	303 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms