RNA–Protein interactions for RNA: YBR178W

YBR178W, Transcript of Dubious open reading frame, yeastyeast

Gene YBR178W, Length 375 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBR178WYBR178W TMA17Q12513 150 aa-0.02□□□□□ -2.41
YBR178WYBR178W YGR161W-CQ3E744 92 aa-0.02□□□□□ -2.41
YBR178WYBR178W RPS19AP07280 144 aaKnown RBP-0.03□□□□□ -2.41
YBR178WYBR178W RPS19BP07281 144 aaPredicted RBP-0.03□□□□□ -2.41
YBR178WYBR178W MSI1P13712 422 aa-0.03□□□□□ -2.41
YBR178WYBR178W PRP2P20095 876 aaPredicted RBP-0.03□□□□□ -2.41
YBR178WYBR178W ZRC1P20107 442 aa-0.03□□□□□ -2.41
YBR178WYBR178W SLY1P22213 666 aa-0.03□□□□□ -2.41
YBR178WYBR178W VMA16P23968 213 aa-0.03□□□□□ -2.41
YBR178WYBR178W SNT1P25357 1226 aa-0.03□□□□□ -2.41
YBR178WYBR178W YCL049CP25577 312 aa-0.03□□□□□ -2.41
YBR178WYBR178W ALK2P32789 676 aaPredicted RBP-0.03□□□□□ -2.41
YBR178WYBR178W YBR144CP34215 104 aa-0.03□□□□□ -2.41
YBR178WYBR178W MRPL36P36531 177 aa-0.03□□□□□ -2.41
YBR178WYBR178W CCT6P39079 546 aa-0.03□□□□□ -2.41
YBR178WYBR178W FHL1P39521 936 aa-0.03□□□□□ -2.41
YBR178WYBR178W SYG1P40528 902 aa-0.03□□□□□ -2.41
YBR178WYBR178W ATG18P43601 500 aa-0.03□□□□□ -2.41
YBR178WYBR178W YFR057WP43625 151 aa-0.03□□□□□ -2.41
YBR178WYBR178W ZPR1P53303 486 aaKnown RBP-0.03□□□□□ -2.41
YBR178WYBR178W RPT6Q01939 405 aaKnown RBP-0.03□□□□□ -2.41
YBR178WYBR178W TOF2Q02208 771 aa-0.03□□□□□ -2.41
YBR178WYBR178W NUP116Q02630 1113 aa-0.03□□□□□ -2.41
YBR178WYBR178W RPL21AQ02753 160 aaKnown RBP-0.03□□□□□ -2.41
YBR178WYBR178W HOT1Q03213 719 aa-0.03□□□□□ -2.41
YBR178WYBR178W RCO1Q04779 684 aa-0.03□□□□□ -2.41
YBR178WYBR178W LDS2Q08218 356 aa-0.03□□□□□ -2.41
YBR178WYBR178W TIR4Q12218 487 aaPredicted RBP-0.03□□□□□ -2.41
YBR178WYBR178W RPL21BQ12672 160 aaKnown RBP-0.03□□□□□ -2.41
YBR178WYBR178W RTP1Q12751 981 aa-0.03□□□□□ -2.41
YBR178WYBR178W YTA7P40340 1379 aa-0.04□□□□□ -2.42
YBR178WYBR178W MSS18P08593 268 aa-0.04□□□□□ -2.42
YBR178WYBR178W PHO81P17442 1178 aa-0.04□□□□□ -2.42
YBR178WYBR178W SSE2P32590 693 aaKnown RBP-0.04□□□□□ -2.42
YBR178WYBR178W FRM2P37261 193 aa-0.04□□□□□ -2.42
YBR178WYBR178W PAF1P38351 445 aa-0.04□□□□□ -2.42
YBR178WYBR178W PFS1P38872 237 aa-0.04□□□□□ -2.42
YBR178WYBR178W PTI1P39927 425 aaPredicted RBP-0.04□□□□□ -2.42
YBR178WYBR178W VHS2P40463 436 aa-0.04□□□□□ -2.42
YBR178WYBR178W AIM22P47051 409 aa-0.04□□□□□ -2.42
YBR178WYBR178W COQ5P49017 307 aa-0.04□□□□□ -2.42
YBR178WYBR178W LCL3P53153 274 aa-0.04□□□□□ -2.42
YBR178WYBR178W VHT1P53241 593 aa-0.04□□□□□ -2.42
YBR178WYBR178W YNR048WP53740 393 aa-0.04□□□□□ -2.42
YBR178WYBR178W MFB1Q04922 465 aa-0.04□□□□□ -2.42
YBR178WYBR178W RIF2Q06208 395 aa-0.04□□□□□ -2.42
YBR178WYBR178W YOR338WQ99326 363 aa-0.04□□□□□ -2.42
YBR178WYBR178W YOL085CQ99345 113 aa-0.04□□□□□ -2.42
YBR178WYBR178W MTF2P10849 440 aa-0.05□□□□□ -2.42
YBR178WYBR178W HSC82P15108 705 aaKnown RBP-0.05□□□□□ -2.42
YBR178WYBR178W DEP1P31385 405 aa-0.05□□□□□ -2.42
YBR178WYBR178W YCR041WP37265 110 aa-0.05□□□□□ -2.42
YBR178WYBR178W JLP2P40206 208 aa-0.05□□□□□ -2.42
YBR178WYBR178W YMR147WP40218 223 aaKnown RBP-0.05□□□□□ -2.42
YBR178WYBR178W IGD1P43598 195 aa-0.05□□□□□ -2.42
YBR178WYBR178W AAD10P47182 288 aa-0.05□□□□□ -2.42
YBR178WYBR178W YIP1P53039 248 aa-0.05□□□□□ -2.42
YBR178WYBR178W VID30P53076 958 aa-0.05□□□□□ -2.42
YBR178WYBR178W MST27P53176 234 aa-0.05□□□□□ -2.42
YBR178WYBR178W SOV1Q04748 898 aa-0.05□□□□□ -2.42
YBR178WYBR178W HIM1Q06674 414 aa-0.05□□□□□ -2.42
YBR178WYBR178W YPR022CQ12139 1133 aa-0.05□□□□□ -2.42
YBR178WYBR178W FRE8Q12209 686 aa-0.05□□□□□ -2.42
YBR178WYBR178W MF(ALPHA)1P01149 165 aa-0.06□□□□□ -2.42
YBR178WYBR178W UBC1P21734 215 aaKnown RBP-0.06□□□□□ -2.42
YBR178WYBR178W YEF1P32622 495 aa-0.06□□□□□ -2.42
YBR178WYBR178W TKL2P33315 681 aa-0.06□□□□□ -2.42
YBR178WYBR178W SKT5P34226 696 aa-0.06□□□□□ -2.42
YBR178WYBR178W ALY1P36117 915 aa-0.06□□□□□ -2.42
YBR178WYBR178W YBL081WP38180 368 aaKnown RBP-0.06□□□□□ -2.42
YBR178WYBR178W REG2P38232 338 aa-0.06□□□□□ -2.42
YBR178WYBR178W ASP1P38986 381 aaPredicted RBP-0.06□□□□□ -2.42
YBR178WYBR178W RHO5P53879 331 aaKnown RBP-0.06□□□□□ -2.42
YBR178WYBR178W TGL2P54857 326 aa-0.06□□□□□ -2.42
YBR178WYBR178W SKI8Q02793 397 aaPredicted RBP-0.06□□□□□ -2.42
YBR178WYBR178W IOC4Q04213 475 aa-0.06□□□□□ -2.42
YBR178WYBR178W VTI1Q04338 217 aa-0.06□□□□□ -2.42
YBR178WYBR178W COQ9Q05779 260 aa-0.06□□□□□ -2.42
YBR178WYBR178W YLL032CQ07834 825 aaKnown RBP RIP-Chip data-0.06□□□□□ -2.42not detected
YBR178WYBR178W YGK3Q12222 375 aaPredicted RBP-0.06□□□□□ -2.42
YBR178WYBR178W NYV1Q12255 253 aa-0.06□□□□□ -2.42
YBR178WYBR178W SNU66Q12420 587 aaPredicted RBP-0.06□□□□□ -2.42
YBR178WYBR178W CEX1Q12453 761 aa-0.06□□□□□ -2.42
YBR178WYBR178W TOP1P04786 769 aa-0.07□□□□□ -2.42
YBR178WYBR178W POL4P25615 582 aa-0.07□□□□□ -2.42
YBR178WYBR178W TCD2P36101 447 aaKnown RBP-0.07□□□□□ -2.42
YBR178WYBR178W FPR3P38911 411 aaKnown RBP-0.07□□□□□ -2.42
YBR178WYBR178W MBB1P39534 108 aa-0.07□□□□□ -2.42
YBR178WYBR178W ERP2P39704 215 aa-0.07□□□□□ -2.42
YBR178WYBR178W PSF2P40359 213 aa-0.07□□□□□ -2.42
YBR178WYBR178W LYS4P49367 693 aaPredicted RBP-0.07□□□□□ -2.42
YBR178WYBR178W ARC35P53731 342 aaKnown RBP-0.07□□□□□ -2.42
YBR178WYBR178W MIX17Q03667 156 aa-0.07□□□□□ -2.42
YBR178WYBR178W INP2Q03824 705 aa-0.07□□□□□ -2.42
YBR178WYBR178W BUD22Q04347 519 aaKnown RBP-0.07□□□□□ -2.42
YBR178WYBR178W RRP9Q06506 573 aaKnown RBP-0.07□□□□□ -2.42
YBR178WYBR178W LUC7Q07508 261 aaPredicted RBP-0.07□□□□□ -2.42
YBR178WYBR178W CDC16P09798 840 aa-0.08□□□□□ -2.42
YBR178WYBR178W FUS3P16892 353 aaKnown RBP-0.08□□□□□ -2.42
YBR178WYBR178W MRP20P32387 263 aa-0.08□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms