RNA–Protein interactions for RNA: YBR173C

UMP1, Transcript of Chaperone required for correct maturation of the 20S proteasome, yeast

Gene UMP1, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UMP1	YBR173C	SUC2	P00724	532 aa		4.56	□□□□□ -1.68
UMP1	YBR173C	PHO3	P24031	467 aa		4.56	□□□□□ -1.68
UMP1	YBR173C	PMT1	P33775	817 aa		4.56	□□□□□ -1.68
UMP1	YBR173C	LDB7	P38210	180 aa		4.56	□□□□□ -1.68
UMP1	YBR173C	LRO1	P40345	661 aa		4.56	□□□□□ -1.68
UMP1	YBR173C	SWC4	P53201	476 aa		4.56	□□□□□ -1.68
UMP1	YBR173C	PEF1	P53238	335 aa		4.56	□□□□□ -1.68
UMP1	YBR173C	PEX8	P53248	589 aa		4.56	□□□□□ -1.68
UMP1	YBR173C	BUD32	P53323	261 aa		4.56	□□□□□ -1.68
UMP1	YBR173C	BUD17	P53727	317 aa		4.56	□□□□□ -1.68
UMP1	YBR173C	UBX4	P54730	416 aa		4.56	□□□□□ -1.68
UMP1	YBR173C	OSH6	Q02201	448 aa		4.56	□□□□□ -1.68
UMP1	YBR173C	YMR209C	Q03648	457 aa		4.56	□□□□□ -1.68
UMP1	YBR173C	YML053C	Q04978	212 aa		4.56	□□□□□ -1.68
UMP1	YBR173C	HEL2	Q05580	639 aa	Known RBP	4.56	□□□□□ -1.68
UMP1	YBR173C	ORM2	Q06144	216 aa		4.56	□□□□□ -1.68
UMP1	YBR173C	ATG10	Q07879	167 aa		4.56	□□□□□ -1.68
UMP1	YBR173C	YLR053C	Q12026	108 aa		4.56	□□□□□ -1.68
UMP1	YBR173C	NUS1	Q12063	375 aa		4.56	□□□□□ -1.68
UMP1	YBR173C	YMR030W-A	Q3E760	96 aa		4.56	□□□□□ -1.68
UMP1	YBR173C	YOR338W	Q99326	363 aa		4.56	□□□□□ -1.68
UMP1	YBR173C	MSB2	P32334	1306 aa		4.55	□□□□□ -1.68
UMP1	YBR173C	STE2	D6VTK4	431 aa		4.55	□□□□□ -1.68
UMP1	YBR173C	SEC53	P07283	254 aa	Known RBP	4.55	□□□□□ -1.68
UMP1	YBR173C	SEC12	P11655	471 aa		4.55	□□□□□ -1.68
UMP1	YBR173C	SRV2	P17555	526 aa	Known RBP	4.55	□□□□□ -1.68
UMP1	YBR173C	UBA1	P22515	1024 aa	Known RBP	4.55	□□□□□ -1.68
UMP1	YBR173C	MTC7	P32633	139 aa		4.55	□□□□□ -1.68
UMP1	YBR173C	TOM20	P35180	183 aa		4.55	□□□□□ -1.68
UMP1	YBR173C	APD1	P38281	316 aa		4.55	□□□□□ -1.68
UMP1	YBR173C	YJL193W	P39542	402 aa		4.55	□□□□□ -1.68
UMP1	YBR173C	SSP120	P39931	234 aa	Known RBP	4.55	□□□□□ -1.68
UMP1	YBR173C	PEP8	P40335	379 aa		4.55	□□□□□ -1.68
UMP1	YBR173C	NUP84	P52891	726 aa		4.55	□□□□□ -1.68
UMP1	YBR173C	SLT2	Q00772	484 aa		4.55	□□□□□ -1.68
UMP1	YBR173C	CSN9	Q03981	162 aa		4.55	□□□□□ -1.68
UMP1	YBR173C	NAG1	Q8TGN9	163 aa		4.55	□□□□□ -1.68
UMP1	YBR173C	RPL7A	P05737	244 aa	Known RBP	4.54	□□□□□ -1.68
UMP1	YBR173C	SPT15	P13393	240 aa	Known RBP	4.54	□□□□□ -1.68
UMP1	YBR173C	VPS33	P20795	691 aa		4.54	□□□□□ -1.68
UMP1	YBR173C	AAD3	P25612	363 aa		4.54	□□□□□ -1.68
UMP1	YBR173C	CWH43	P25618	953 aa		4.54	□□□□□ -1.68
UMP1	YBR173C	SPS19	P32573	292 aa	Known RBP	4.54	□□□□□ -1.68
UMP1	YBR173C	PRP18	P33411	251 aa	Predicted RBP	4.54	□□□□□ -1.68
UMP1	YBR173C	ASK1	P35734	292 aa		4.54	□□□□□ -1.68
UMP1	YBR173C	RRN3	P36070	627 aa		4.54	□□□□□ -1.68
UMP1	YBR173C	PHO89	P38361	574 aa		4.54	□□□□□ -1.68
UMP1	YBR173C	SRP72	P38688	640 aa	Known RBP	4.54	□□□□□ -1.68
UMP1	YBR173C	TIF34	P40217	347 aa	Known RBP	4.54	□□□□□ -1.68
UMP1	YBR173C	YJR061W	P40355	935 aa		4.54	□□□□□ -1.68
UMP1	YBR173C	DSN1	P40568	576 aa		4.54	□□□□□ -1.68
UMP1	YBR173C	CTK3	P46963	296 aa	Predicted RBP	4.54	□□□□□ -1.68
UMP1	YBR173C	COQ5	P49017	307 aa		4.54	□□□□□ -1.68
UMP1	YBR173C	TAF12	Q03761	539 aa		4.54	□□□□□ -1.68
UMP1	YBR173C	ARX1	Q03862	593 aa	Known RBP	4.54	□□□□□ -1.68
UMP1	YBR173C	EMI1	Q04406	187 aa		4.54	□□□□□ -1.68
UMP1	YBR173C	YDR109C	Q04585	715 aa		4.54	□□□□□ -1.68
UMP1	YBR173C	RCO1	Q04779	684 aa		4.54	□□□□□ -1.68
UMP1	YBR173C	FAR8	Q05040	523 aa		4.54	□□□□□ -1.68
UMP1	YBR173C	CIA1	Q05583	330 aa		4.54	□□□□□ -1.68
UMP1	YBR173C	ARR3	Q06598	404 aa		4.54	□□□□□ -1.68
UMP1	YBR173C	SAM4	Q08985	325 aa	Known RBP	4.54	□□□□□ -1.68
UMP1	YBR173C	SMF3	Q12078	473 aa	Predicted RBP	4.54	□□□□□ -1.68
UMP1	YBR173C	APC9	Q12107	265 aa		4.54	□□□□□ -1.68
UMP1	YBR173C	RPL7B	Q12213	244 aa	Known RBP	4.54	□□□□□ -1.68
UMP1	YBR173C	UBX3	Q12229	455 aa		4.54	□□□□□ -1.68
UMP1	YBR173C	RGS2	Q99188	309 aa		4.54	□□□□□ -1.68
UMP1	YBR173C	APA1	P16550	321 aa	Known RBP	4.53	□□□□□ -1.68
UMP1	YBR173C	MDM10	P18409	493 aa		4.53	□□□□□ -1.68
UMP1	YBR173C	EPT1	P22140	391 aa		4.53	□□□□□ -1.68
UMP1	YBR173C	RFA2	P26754	273 aa	Known RBP	4.53	□□□□□ -1.68
UMP1	YBR173C	RIM1	P32445	135 aa	Known RBP	4.53	□□□□□ -1.68
UMP1	YBR173C	HXT4	P32467	576 aa		4.53	□□□□□ -1.68
UMP1	YBR173C	SRX1	P36077	127 aa		4.53	□□□□□ -1.68
UMP1	YBR173C	HOT13	P36078	116 aa		4.53	□□□□□ -1.68
UMP1	YBR173C	STB6	P36085	766 aa		4.53	□□□□□ -1.68
UMP1	YBR173C	EFM1	P38732	585 aa		4.53	□□□□□ -1.68
UMP1	YBR173C	LIN1	P38852	340 aa	Predicted RBP	4.53	□□□□□ -1.68
UMP1	YBR173C	BAT1	P38891	393 aa	Known RBP	4.53	□□□□□ -1.68
UMP1	YBR173C	RPH1	P39956	796 aa		4.53	□□□□□ -1.68
UMP1	YBR173C	LSM5	P40089	93 aa	Known RBP	4.53	□□□□□ -1.68
UMP1	YBR173C	GPP2	P40106	250 aa	Known RBP	4.53	□□□□□ -1.68
UMP1	YBR173C	PFK26	P40433	827 aa	Known RBP	4.53	□□□□□ -1.68
UMP1	YBR173C	IME4	P41833	600 aa		4.53	□□□□□ -1.68
UMP1	YBR173C	YJL107C	P42947	387 aa		4.53	□□□□□ -1.68
UMP1	YBR173C	BNA3	P47039	444 aa	Known RBP	4.53	□□□□□ -1.68
UMP1	YBR173C	BOL2	P53082	120 aa		4.53	□□□□□ -1.68
UMP1	YBR173C	YDR131C	Q03899	556 aa		4.53	□□□□□ -1.68
UMP1	YBR173C	YLR177W	Q06251	628 aa		4.53	□□□□□ -1.68
UMP1	YBR173C	VTA1	Q06263	330 aa		4.53	□□□□□ -1.68
UMP1	YBR173C	NGL1	Q08213	363 aa	Known RBP	4.53	□□□□□ -1.68
UMP1	YBR173C	BUD7	Q08754	746 aa		4.53	□□□□□ -1.68
UMP1	YBR173C	TRM8	Q12009	286 aa		4.53	□□□□□ -1.68
UMP1	YBR173C	NCA2	Q12374	616 aa		4.53	□□□□□ -1.68
UMP1	YBR173C	ICT1	Q12385	394 aa		4.53	□□□□□ -1.68
UMP1	YBR173C	YKR104W	P0CE69	306 aa		4.52	□□□□□ -1.69
UMP1	YBR173C	YMR085W	P0CF18	432 aa		4.52	□□□□□ -1.69
UMP1	YBR173C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
UMP1	YBR173C	AMD2	P22580	549 aa		4.52	□□□□□ -1.69
UMP1	YBR173C	PTP1	P25044	335 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms