RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 DHX38Q92620 1227 aaKnown RBP24.39■■□□□ 1.49
SCARB1-210ENST00000545493 SEC63Q9UGP8 760 aaKnown RBP24.39■■□□□ 1.49
SCARB1-210ENST00000545493 YBX2Q9Y2T7 364 aaKnown RBP24.39■■□□□ 1.49
SCARB1-210ENST00000545493 PTPRSQ13332 1948 aa24.39■■□□□ 1.49
SCARB1-210ENST00000545493 MEIS2O14770 477 aa24.38■■□□□ 1.49
SCARB1-210ENST00000545493 CDC45O75419 566 aa24.38■■□□□ 1.49
SCARB1-210ENST00000545493 IQCF3P0C7M6 154 aa24.38■■□□□ 1.49
SCARB1-210ENST00000545493 RFC2P35250 354 aa24.38■■□□□ 1.49
SCARB1-210ENST00000545493 GNAQP50148 359 aa24.38■■□□□ 1.49
SCARB1-210ENST00000545493 SEMA3FQ13275 785 aa24.38■■□□□ 1.49
SCARB1-210ENST00000545493 MFSD10Q14728 455 aa24.38■■□□□ 1.49
SCARB1-210ENST00000545493 USP17L6PQ6QN14 398 aa24.38■■□□□ 1.49
SCARB1-210ENST00000545493 TMTC3Q6ZXV5 915 aa24.38■■□□□ 1.49
SCARB1-210ENST00000545493 MICU3Q86XE3 530 aa24.38■■□□□ 1.49
SCARB1-210ENST00000545493 TMTC2Q8N394 836 aa24.38■■□□□ 1.49
SCARB1-210ENST00000545493 INPP4AQ96PE3 977 aaPredicted RBP24.38■■□□□ 1.49
SCARB1-210ENST00000545493 KATNAL1Q9BW62 490 aa24.38■■□□□ 1.49
SCARB1-210ENST00000545493 SLC12A7Q9Y666 1083 aa24.38■■□□□ 1.49
SCARB1-210ENST00000545493 TET1Q8NFU7 2136 aa24.38■■□□□ 1.49
SCARB1-210ENST00000545493 TRIP12Q14669 1992 aaPredicted RBP24.38■■□□□ 1.49
SCARB1-210ENST00000545493 PIK3CDO00329 1044 aa24.37■■□□□ 1.49
SCARB1-210ENST00000545493 CALM1P0DP23 149 aa24.37■■□□□ 1.49
SCARB1-210ENST00000545493 CALM2P0DP24 149 aa24.37■■□□□ 1.49
SCARB1-210ENST00000545493 CALM3P0DP25 149 aa24.37■■□□□ 1.49
SCARB1-210ENST00000545493 BFSP2Q13515 415 aa24.37■■□□□ 1.49
SCARB1-210ENST00000545493 RAB30Q15771 203 aa24.37■■□□□ 1.49
SCARB1-210ENST00000545493 KIAA0753Q2KHM9 967 aa24.37■■□□□ 1.49
SCARB1-210ENST00000545493 RASEFQ8IZ41 740 aa24.37■■□□□ 1.49
SCARB1-210ENST00000545493 SPATA33Q96N06 139 aa24.37■■□□□ 1.49
SCARB1-210ENST00000545493 ALG1Q9BT22 464 aa24.37■■□□□ 1.49
SCARB1-210ENST00000545493 BCAS3Q9H6U6 928 aa24.37■■□□□ 1.49
SCARB1-210ENST00000545493 HDAC6Q9UBN7 1215 aa24.37■■□□□ 1.49
SCARB1-210ENST00000545493 CNTNAP5Q8WYK1 1306 aa24.36■■□□□ 1.49
SCARB1-210ENST00000545493 ZBBXA8MT70 800 aa24.36■■□□□ 1.49
SCARB1-210ENST00000545493 RNF20Q5VTR2 975 aa24.36■■□□□ 1.49
SCARB1-210ENST00000545493 CAGE1Q8TC20 777 aa24.36■■□□□ 1.49
SCARB1-210ENST00000545493 TCEANC2Q96MN5 208 aa24.36■■□□□ 1.49
SCARB1-210ENST00000545493 NKX2-4Q9H2Z4 354 aa24.36■■□□□ 1.49
SCARB1-210ENST00000545493 SLC4A7Q9Y6M7 1214 aa24.36■■□□□ 1.49
SCARB1-210ENST00000545493 hCG_1642624A0A1W2PR95 340 aa24.35■■□□□ 1.49
SCARB1-210ENST00000545493 TGFB3P10600 412 aa24.35■■□□□ 1.49
SCARB1-210ENST00000545493 ICAM3P32942 547 aa24.35■■□□□ 1.49
SCARB1-210ENST00000545493 RBL2Q08999 1139 aa24.35■■□□□ 1.49
SCARB1-210ENST00000545493 HIC1Q14526 733 aa24.35■■□□□ 1.49
SCARB1-210ENST00000545493 ADCK5Q3MIX3 580 aa24.35■■□□□ 1.49
SCARB1-210ENST00000545493 GNPTABQ3T906 1256 aa24.35■■□□□ 1.49
SCARB1-210ENST00000545493 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.35■■□□□ 1.49
SCARB1-210ENST00000545493 SMARCC2Q8TAQ2 1214 aa24.35■■□□□ 1.49
SCARB1-210ENST00000545493 AFAP1L1Q8TED9 768 aa24.35■■□□□ 1.49
SCARB1-210ENST00000545493 WNT8BQ93098 351 aa24.35■■□□□ 1.49
SCARB1-210ENST00000545493 NEK1Q96PY6 1258 aa24.35■■□□□ 1.49
SCARB1-210ENST00000545493 RBAK-RBAKDNI3L0D1 243 aa24.34■■□□□ 1.49
SCARB1-210ENST00000545493 STAM2O75886 525 aa24.34■■□□□ 1.49
SCARB1-210ENST00000545493 RABGGTBP53611 331 aa24.34■■□□□ 1.49
SCARB1-210ENST00000545493 APOA5Q6Q788 366 aa24.34■■□□□ 1.49
SCARB1-210ENST00000545493 CCDC155Q8N6L0 562 aa24.34■■□□□ 1.49
SCARB1-210ENST00000545493 C7orf31Q8N865 590 aa24.34■■□□□ 1.49
SCARB1-210ENST00000545493 FANCBQ8NB91 859 aa24.34■■□□□ 1.49
SCARB1-210ENST00000545493 RETREG2Q8NC44 543 aa24.34■■□□□ 1.49
SCARB1-210ENST00000545493 CUL5Q93034 780 aa24.34■■□□□ 1.49
SCARB1-210ENST00000545493 C16orf70Q9BSU1 422 aa24.34■■□□□ 1.49
SCARB1-210ENST00000545493 MSRAQ9UJ68 235 aa24.34■■□□□ 1.49
SCARB1-210ENST00000545493 REV3LO60673 3130 aa24.33■■□□□ 1.49
SCARB1-210ENST00000545493 EXOSC10Q01780 885 aaKnown RBP24.33■■□□□ 1.49
SCARB1-210ENST00000545493 GPNMBQ14956 572 aa24.33■■□□□ 1.49
SCARB1-210ENST00000545493 PCNX4Q63HM2 1172 aa24.33■■□□□ 1.49
SCARB1-210ENST00000545493 CCDC82Q8N4S0 544 aa24.33■■□□□ 1.49
SCARB1-210ENST00000545493 MLXIPQ9HAP2 919 aa24.33■■□□□ 1.49
SCARB1-210ENST00000545493 RTEL1Q9NZ71 1219 aa24.33■■□□□ 1.49
SCARB1-210ENST00000545493 TELO2Q9Y4R8 837 aa24.33■■□□□ 1.49
SCARB1-210ENST00000545493 SPATA31C2B4DYI2 1134 aa24.32■■□□□ 1.48
SCARB1-210ENST00000545493 FIBPO43427 364 aa24.32■■□□□ 1.48
SCARB1-210ENST00000545493 PPFIA4O75335 1185 aa24.32■■□□□ 1.48
SCARB1-210ENST00000545493 LGALS2P05162 132 aa24.32■■□□□ 1.48
SCARB1-210ENST00000545493 MYOGP15173 224 aa24.32■■□□□ 1.48
SCARB1-210ENST00000545493 ATP2A2P16615 1042 aaKnown RBP24.32■■□□□ 1.48
SCARB1-210ENST00000545493 UBE2SQ16763 222 aa24.32■■□□□ 1.48
SCARB1-210ENST00000545493 TRIM71Q2Q1W2 868 aaKnown RBP24.32■■□□□ 1.48
SCARB1-210ENST00000545493 TSGA10IPQ3SY00 556 aa24.32■■□□□ 1.48
SCARB1-210ENST00000545493 METTL7BQ6UX53 244 aa24.32■■□□□ 1.48
SCARB1-210ENST00000545493 LRRC8DQ7L1W4 858 aa24.32■■□□□ 1.48
SCARB1-210ENST00000545493 XIRP2A4UGR9 3374 aa24.31■■□□□ 1.48
SCARB1-210ENST00000545493 DLL1O00548 723 aa24.31■■□□□ 1.48
SCARB1-210ENST00000545493 CKBP12277 381 aa24.31■■□□□ 1.48
SCARB1-210ENST00000545493 ACTN1P12814 892 aa24.31■■□□□ 1.48
SCARB1-210ENST00000545493 SELPP16109 830 aa24.31■■□□□ 1.48
SCARB1-210ENST00000545493 ZNF200P98182 395 aaPredicted RBP24.31■■□□□ 1.48
SCARB1-210ENST00000545493 TRAF7Q6Q0C0 670 aa24.31■■□□□ 1.48
SCARB1-210ENST00000545493 USP38Q8NB14 1042 aa24.31■■□□□ 1.48
SCARB1-210ENST00000545493 PRDM12Q9H4Q4 367 aa24.31■■□□□ 1.48
SCARB1-210ENST00000545493 BRPF3Q9ULD4 1205 aa24.31■■□□□ 1.48
SCARB1-210ENST00000545493 TRANK1O15050 2925 aa24.31■■□□□ 1.48
SCARB1-210ENST00000545493 HOXC8P31273 242 aa24.3■■□□□ 1.48
SCARB1-210ENST00000545493 PTK7Q13308 1070 aa24.3■■□□□ 1.48
SCARB1-210ENST00000545493 NEDD9Q14511 834 aa24.3■■□□□ 1.48
SCARB1-210ENST00000545493 WWC2Q6AWC2 1192 aa24.3■■□□□ 1.48
SCARB1-210ENST00000545493 CYFIP1Q7L576 1253 aa24.3■■□□□ 1.48
SCARB1-210ENST00000545493 DHX32Q7L7V1 743 aaKnown RBP24.3■■□□□ 1.48
SCARB1-210ENST00000545493 GPR20Q99678 358 aa24.3■■□□□ 1.48
SCARB1-210ENST00000545493 FTOQ9C0B1 505 aaKnown RBP eCLIP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms