RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W YGR111WP53265 400 aa2.56□□□□□ -2
PEP12YOR036W ZPR1P53303 486 aaKnown RBP2.56□□□□□ -2
PEP12YOR036W RPT4P53549 437 aaKnown RBP2.56□□□□□ -2
PEP12YOR036W PEX25Q02969 394 aa2.56□□□□□ -2
PEP12YOR036W IZH1Q03419 316 aa2.56□□□□□ -2
PEP12YOR036W ACL4Q03771 387 aa2.56□□□□□ -2
PEP12YOR036W RSF1Q05043 376 aa2.56□□□□□ -2
PEP12YOR036W DIC1Q06143 298 aa2.56□□□□□ -2
PEP12YOR036W MMR1Q06324 491 aa2.56□□□□□ -2
PEP12YOR036W UAF30Q08747 228 aa2.56□□□□□ -2
PEP12YOR036W RKM1Q08961 583 aaPredicted RBP2.56□□□□□ -2
PEP12YOR036W KEL3Q08979 651 aaPredicted RBP2.56□□□□□ -2
PEP12YOR036W MED2Q12124 431 aa2.56□□□□□ -2
PEP12YOR036W VAM3Q12241 283 aa2.56□□□□□ -2
PEP12YOR036W SEC63P14906 663 aa2.55□□□□□ -2
PEP12YOR036W ATP10P18496 279 aa2.55□□□□□ -2
PEP12YOR036W URA4P20051 364 aa2.55□□□□□ -2
PEP12YOR036W CLN1P20437 546 aa2.55□□□□□ -2
PEP12YOR036W RRP7P25368 297 aaPredicted RBP2.55□□□□□ -2
PEP12YOR036W HIR2P32480 875 aa2.55□□□□□ -2
PEP12YOR036W UTR4P32626 227 aa2.55□□□□□ -2
PEP12YOR036W YER130CP39959 443 aa2.55□□□□□ -2
PEP12YOR036W SYG1P40528 902 aa2.55□□□□□ -2
PEP12YOR036W YNL234WP53857 426 aa2.55□□□□□ -2
PEP12YOR036W ESBP6P53918 673 aa2.55□□□□□ -2
PEP12YOR036W KTR5P53966 522 aaPredicted RBP2.55□□□□□ -2
PEP12YOR036W SMA1Q02651 245 aa2.55□□□□□ -2
PEP12YOR036W GYL1Q04322 720 aa2.55□□□□□ -2
PEP12YOR036W THI20Q08224 551 aa2.55□□□□□ -2
PEP12YOR036W RSA1Q08932 381 aa2.55□□□□□ -2
PEP12YOR036W RPN5Q12250 445 aaKnown RBP2.55□□□□□ -2
PEP12YOR036W HSP42Q12329 375 aa2.55□□□□□ -2
PEP12YOR036W SKS1Q12505 502 aa2.55□□□□□ -2
PEP12YOR036W CTF3Q12748 733 aa2.55□□□□□ -2
PEP12YOR036W SPT7P35177 1332 aa2.54□□□□□ -2
PEP12YOR036W BRF1P29056 596 aa2.54□□□□□ -2
PEP12YOR036W SEC1P30619 724 aaKnown RBP2.54□□□□□ -2
PEP12YOR036W MCM4P30665 933 aaKnown RBP2.54□□□□□ -2
PEP12YOR036W SIN4P32259 974 aa2.54□□□□□ -2
PEP12YOR036W DPH2P32461 534 aa2.54□□□□□ -2
PEP12YOR036W PRP21P32524 280 aaPredicted RBP2.54□□□□□ -2
PEP12YOR036W PDR3P33200 976 aa2.54□□□□□ -2
PEP12YOR036W HEL1P36113 551 aa2.54□□□□□ -2
PEP12YOR036W VHC1P38329 1120 aa2.54□□□□□ -2
PEP12YOR036W EFM2P38347 419 aa2.54□□□□□ -2
PEP12YOR036W ERG7P38604 731 aa2.54□□□□□ -2
PEP12YOR036W RFC3P38629 340 aa2.54□□□□□ -2
PEP12YOR036W CCT2P39076 527 aaKnown RBP2.54□□□□□ -2
PEP12YOR036W CAJ1P39101 391 aa2.54□□□□□ -2
PEP12YOR036W SER3P40054 469 aa2.54□□□□□ -2
PEP12YOR036W YTA12P40341 825 aa2.54□□□□□ -2
PEP12YOR036W CSM2P40465 213 aa2.54□□□□□ -2
PEP12YOR036W GUF1P46943 645 aa2.54□□□□□ -2
PEP12YOR036W CUL3P53202 744 aa2.54□□□□□ -2
PEP12YOR036W YGR016WP53209 190 aa2.54□□□□□ -2
PEP12YOR036W MSS11Q03825 758 aa2.54□□□□□ -2
PEP12YOR036W YMR130WQ04223 302 aa2.54□□□□□ -2
PEP12YOR036W HEL2Q05580 639 aaKnown RBP2.54□□□□□ -2
PEP12YOR036W MDM30Q05930 598 aa2.54□□□□□ -2
PEP12YOR036W BNA5Q05979 453 aa2.54□□□□□ -2
PEP12YOR036W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
PEP12YOR036W CFT2Q12102 859 aaPredicted RBP2.54□□□□□ -2
PEP12YOR036W BSC1Q12140 328 aa2.54□□□□□ -2
PEP12YOR036W MES1P00958 751 aaKnown RBP2.53□□□□□ -2
PEP12YOR036W RPL1AP0CX43 217 aaKnown RBP2.53□□□□□ -2
PEP12YOR036W RPL1BP0CX44 217 aaKnown RBP2.53□□□□□ -2
PEP12YOR036W AMD1P15274 810 aaKnown RBP2.53□□□□□ -2
PEP12YOR036W PRP16P15938 1071 aaPredicted RBP2.53□□□□□ -2
PEP12YOR036W GLK1P17709 500 aaKnown RBP2.53□□□□□ -2
PEP12YOR036W SPO7P18410 259 aa2.53□□□□□ -2
PEP12YOR036W MGR1P25573 417 aa2.53□□□□□ -2
PEP12YOR036W NIP1P32497 812 aaKnown RBP2.53□□□□□ -2
PEP12YOR036W REC114P32841 428 aa2.53□□□□□ -2
PEP12YOR036W ECM15P35195 104 aa2.53□□□□□ -2
PEP12YOR036W SWH1P35845 1188 aa2.53□□□□□ -2
PEP12YOR036W YHR054CP38780 354 aa2.53□□□□□ -2
PEP12YOR036W BZZ1P38822 633 aa2.53□□□□□ -2
PEP12YOR036W FAU1P40099 211 aa2.53□□□□□ -2
PEP12YOR036W EFM4P40516 257 aa2.53□□□□□ -2
PEP12YOR036W AZF1P41696 914 aa2.53□□□□□ -2
PEP12YOR036W SCD6P45978 349 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
PEP12YOR036W YJL132WP47014 750 aa2.53□□□□□ -2
PEP12YOR036W GPI1P53306 609 aa2.53□□□□□ -2
PEP12YOR036W SAM50P53969 484 aa2.53□□□□□ -2
PEP12YOR036W SLD5Q03406 294 aa2.53□□□□□ -2
PEP12YOR036W YMR254CQ04838 102 aa2.53□□□□□ -2
PEP12YOR036W IVY1Q04934 453 aa2.53□□□□□ -2
PEP12YOR036W GLO2Q05584 274 aa2.53□□□□□ -2
PEP12YOR036W DCS1Q06151 350 aa2.53□□□□□ -2
PEP12YOR036W PHO92Q06390 306 aa2.53□□□□□ -2
PEP12YOR036W DCI1Q08558 271 aa2.53□□□□□ -2
PEP12YOR036W YLR278CQ05854 1341 aa2.52□□□□□ -2.01
PEP12YOR036W SCEIP03882 235 aa2.52□□□□□ -2.01
PEP12YOR036W LPD1P09624 499 aaKnown RBP2.52□□□□□ -2.01
PEP12YOR036W FUN19P28003 413 aaPredicted RBP2.52□□□□□ -2.01
PEP12YOR036W BEM1P29366 551 aa2.52□□□□□ -2.01
PEP12YOR036W ACH1P32316 526 aa2.52□□□□□ -2.01
PEP12YOR036W ANP1P32629 500 aa2.52□□□□□ -2.01
PEP12YOR036W VPS17P32913 551 aa2.52□□□□□ -2.01
PEP12YOR036W MIC60P36112 540 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms