RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C IDI1P15496 288 aa8.36□□□□□ -1.07
RPD3YNL330C DAL81P21657 970 aa8.36□□□□□ -1.07
RPD3YNL330C MNE1P24720 663 aa8.36□□□□□ -1.07
RPD3YNL330C GUT1P32190 709 aa8.36□□□□□ -1.07
RPD3YNL330C SDH3P33421 198 aa8.36□□□□□ -1.07
RPD3YNL330C RMA1P36001 430 aaKnown RBP8.36□□□□□ -1.07
RPD3YNL330C TSL1P38427 1098 aaKnown RBP8.36□□□□□ -1.07
RPD3YNL330C RCK1P38622 512 aa8.36□□□□□ -1.07
RPD3YNL330C TPA1P40032 644 aaKnown RBP8.36□□□□□ -1.07
RPD3YNL330C GAT1P43574 510 aa8.36□□□□□ -1.07
RPD3YNL330C NNF1P47149 201 aa8.36□□□□□ -1.07
RPD3YNL330C IMD4P50094 524 aaKnown RBP8.36□□□□□ -1.07
RPD3YNL330C SDH1Q00711 640 aa8.36□□□□□ -1.07
RPD3YNL330C NPL3Q01560 414 aaKnown RBP RIP-Chip data8.36□□□□□ -1.07not detected
RPD3YNL330C YMR206WQ03695 313 aa8.36□□□□□ -1.07
RPD3YNL330C NEJ1Q06148 342 aa8.36□□□□□ -1.07
RPD3YNL330C MDM36Q06820 579 aa8.36□□□□□ -1.07
RPD3YNL330C BUD7Q08754 746 aa8.36□□□□□ -1.07
RPD3YNL330C RCN2Q12044 265 aa8.36□□□□□ -1.07
RPD3YNL330C YLR046CQ12253 270 aa8.36□□□□□ -1.07
RPD3YNL330C AI3P03877 415 aa8.35□□□□□ -1.07
RPD3YNL330C CDC31P06704 161 aaKnown RBP8.35□□□□□ -1.07
RPD3YNL330C CDC4P07834 779 aa8.35□□□□□ -1.07
RPD3YNL330C ENA1P13587 1091 aa8.35□□□□□ -1.07
RPD3YNL330C KGD1P20967 1014 aaKnown RBP8.35□□□□□ -1.07
RPD3YNL330C PRP19P32523 503 aaKnown RBP8.35□□□□□ -1.07
RPD3YNL330C YPT52P36018 234 aaKnown RBP8.35□□□□□ -1.07
RPD3YNL330C EDS1P38073 919 aa8.35□□□□□ -1.07
RPD3YNL330C DSF2P38213 736 aa8.35□□□□□ -1.07
RPD3YNL330C FMP23P38231 175 aa8.35□□□□□ -1.07
RPD3YNL330C HSE1P38753 452 aa8.35□□□□□ -1.07
RPD3YNL330C RPH1P39956 796 aa8.35□□□□□ -1.07
RPD3YNL330C AIM22P47051 409 aa8.35□□□□□ -1.07
RPD3YNL330C BIR1P47134 954 aa8.35□□□□□ -1.07
RPD3YNL330C IMD3P50095 523 aaKnown RBP8.35□□□□□ -1.07
RPD3YNL330C ROM1P53046 1155 aa8.35□□□□□ -1.07
RPD3YNL330C TWF1P53250 332 aa8.35□□□□□ -1.07
RPD3YNL330C VPS62P53285 467 aa8.35□□□□□ -1.07
RPD3YNL330C GOR1P53839 350 aa8.35□□□□□ -1.07
RPD3YNL330C YNL260CP53846 198 aa8.35□□□□□ -1.07
RPD3YNL330C MPS1P54199 764 aa8.35□□□□□ -1.07
RPD3YNL330C ENA2Q01896 1091 aa8.35□□□□□ -1.07
RPD3YNL330C MET31Q03081 177 aa8.35□□□□□ -1.07
RPD3YNL330C MCA1Q08601 432 aa8.35□□□□□ -1.07
RPD3YNL330C SRF1Q12516 437 aa8.35□□□□□ -1.07
RPD3YNL330C DCP1Q12517 231 aaPredicted RBP8.35□□□□□ -1.07
RPD3YNL330C ENA5Q12691 1091 aa8.35□□□□□ -1.07
RPD3YNL330C YOR338WQ99326 363 aa8.35□□□□□ -1.07
RPD3YNL330C PRC1P00729 532 aa8.34□□□□□ -1.07
RPD3YNL330C YAR066WP0CX18 203 aa8.34□□□□□ -1.07
RPD3YNL330C YHR214WP0CX19 203 aa8.34□□□□□ -1.07
RPD3YNL330C PET122P10355 254 aa8.34□□□□□ -1.07
RPD3YNL330C SGV1P23293 657 aaKnown RBP8.34□□□□□ -1.07
RPD3YNL330C RHB1P25378 209 aa8.34□□□□□ -1.07
RPD3YNL330C GEX1P25596 615 aa8.34□□□□□ -1.07
RPD3YNL330C HCS1P34243 683 aa8.34□□□□□ -1.07
RPD3YNL330C DCW1P36091 449 aa8.34□□□□□ -1.07
RPD3YNL330C GEX2P36173 615 aa8.34□□□□□ -1.07
RPD3YNL330C COS111P38308 924 aa8.34□□□□□ -1.07
RPD3YNL330C YHR020WP38708 688 aaKnown RBP8.34□□□□□ -1.07
RPD3YNL330C YHR112CP38716 378 aa8.34□□□□□ -1.07
RPD3YNL330C SSN3P39073 555 aa8.34□□□□□ -1.07
RPD3YNL330C DDI1P40087 428 aa8.34□□□□□ -1.07
RPD3YNL330C YIL161WP40449 235 aaKnown RBP8.34□□□□□ -1.07
RPD3YNL330C SYG1P40528 902 aa8.34□□□□□ -1.07
RPD3YNL330C REF2P42073 533 aaPredicted RBP8.34□□□□□ -1.07
RPD3YNL330C YFL052WP43551 465 aa8.34□□□□□ -1.07
RPD3YNL330C YJR124CP47159 448 aa8.34□□□□□ -1.07
RPD3YNL330C SPC105P53148 917 aa8.34□□□□□ -1.07
RPD3YNL330C SMA1Q02651 245 aa8.34□□□□□ -1.07
RPD3YNL330C VHS1Q03785 461 aa8.34□□□□□ -1.07
RPD3YNL330C CIA1Q05583 330 aa8.34□□□□□ -1.07
RPD3YNL330C BSP1Q06604 576 aa8.34□□□□□ -1.07
RPD3YNL330C RSC3Q06639 885 aa8.34□□□□□ -1.07
RPD3YNL330C BRE4Q07660 1125 aa8.34□□□□□ -1.07
RPD3YNL330C NDD1Q08887 554 aa8.34□□□□□ -1.07
RPD3YNL330C YPQ1Q12010 308 aa8.34□□□□□ -1.07
RPD3YNL330C YLR125WQ12138 136 aa8.34□□□□□ -1.07
RPD3YNL330C RRP42Q12277 265 aaPredicted RBP8.34□□□□□ -1.07
RPD3YNL330C PST2Q12335 198 aaKnown RBP8.34□□□□□ -1.07
RPD3YNL330C MHT1Q12525 324 aa8.34□□□□□ -1.07
RPD3YNL330C STE3P06783 470 aa8.33□□□□□ -1.08
RPD3YNL330C KAR1P11927 433 aa8.33□□□□□ -1.08
RPD3YNL330C UNG1P12887 359 aa8.33□□□□□ -1.08
RPD3YNL330C MET8P15807 274 aa8.33□□□□□ -1.08
RPD3YNL330C APA1P16550 321 aaKnown RBP8.33□□□□□ -1.08
RPD3YNL330C THR1P17423 357 aaKnown RBP8.33□□□□□ -1.08
RPD3YNL330C PDE1P22434 369 aa8.33□□□□□ -1.08
RPD3YNL330C CMK1P27466 446 aaKnown RBP8.33□□□□□ -1.08
RPD3YNL330C SPS19P32573 292 aaKnown RBP8.33□□□□□ -1.08
RPD3YNL330C ARN2P38724 620 aa8.33□□□□□ -1.08
RPD3YNL330C EXO1P39875 702 aa8.33□□□□□ -1.08
RPD3YNL330C COG3P40094 801 aa8.33□□□□□ -1.08
RPD3YNL330C MMF1P40185 145 aaKnown RBP8.33□□□□□ -1.08
RPD3YNL330C PIR1Q03178 341 aa8.33□□□□□ -1.08
RPD3YNL330C ATG38Q05789 226 aaKnown RBP8.33□□□□□ -1.08
RPD3YNL330C ARR1Q06596 294 aa8.33□□□□□ -1.08
RPD3YNL330C SGO1Q08490 590 aa8.33□□□□□ -1.08
RPD3YNL330C UIP4Q08926 304 aa8.33□□□□□ -1.08
RPD3YNL330C RKM1Q08961 583 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms