RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W OSH3P38713 996 aaKnown RBP1.39□□□□□ -2.19
SLX4YLR135W YIR016WP40572 265 aa1.39□□□□□ -2.19
SLX4YLR135W SCD6P45978 349 aaKnown RBP RIP-Chip data1.39□□□□□ -2.19 RIP-Chip
SLX4YLR135W YGL082WP53155 381 aa1.39□□□□□ -2.19
SLX4YLR135W ART5P53244 586 aaKnown RBP1.39□□□□□ -2.19
SLX4YLR135W RPT4P53549 437 aaKnown RBP1.39□□□□□ -2.19
SLX4YLR135W YPL068CQ02749 293 aa1.39□□□□□ -2.19
SLX4YLR135W RPM2Q02773 1202 aa1.39□□□□□ -2.19
SLX4YLR135W GLO2Q05584 274 aa1.39□□□□□ -2.19
SLX4YLR135W HCR1Q05775 265 aaKnown RBP1.39□□□□□ -2.19
SLX4YLR135W MDM30Q05930 598 aa1.39□□□□□ -2.19
SLX4YLR135W PHO92Q06390 306 aa1.39□□□□□ -2.19
SLX4YLR135W LSP1Q12230 341 aaKnown RBP1.39□□□□□ -2.19
SLX4YLR135W YLR278CQ05854 1341 aa1.39□□□□□ -2.19
SLX4YLR135W MES1P00958 751 aaKnown RBP1.39□□□□□ -2.19
SLX4YLR135W LEU4P06208 619 aaKnown RBP1.39□□□□□ -2.19
SLX4YLR135W SPO7P18410 259 aa1.39□□□□□ -2.19
SLX4YLR135W HNM1P19807 563 aa1.39□□□□□ -2.19
SLX4YLR135W URA4P20051 364 aa1.39□□□□□ -2.19
SLX4YLR135W ERV1P27882 189 aa1.39□□□□□ -2.19
SLX4YLR135W HIR2P32480 875 aa1.39□□□□□ -2.19
SLX4YLR135W YNK1P36010 153 aaKnown RBP1.39□□□□□ -2.19
SLX4YLR135W ARC40P38328 384 aaKnown RBP1.39□□□□□ -2.19
SLX4YLR135W VHC1P38329 1120 aa1.39□□□□□ -2.19
SLX4YLR135W SEC28P40509 296 aaKnown RBP1.39□□□□□ -2.19
SLX4YLR135W DIM1P41819 318 aaKnown RBP1.39□□□□□ -2.19
SLX4YLR135W YJL055WP47044 245 aa1.39□□□□□ -2.19
SLX4YLR135W YJR011CP47086 261 aaPredicted RBP1.39□□□□□ -2.19
SLX4YLR135W CUL3P53202 744 aa1.39□□□□□ -2.19
SLX4YLR135W YGR111WP53265 400 aa1.39□□□□□ -2.19
SLX4YLR135W KTR5P53966 522 aaPredicted RBP1.39□□□□□ -2.19
SLX4YLR135W OAZ1Q02803 292 aa1.39□□□□□ -2.19
SLX4YLR135W ERO1Q03103 563 aa1.39□□□□□ -2.19
SLX4YLR135W YMR130WQ04223 302 aa1.39□□□□□ -2.19
SLX4YLR135W YMR087WQ04299 284 aa1.39□□□□□ -2.19
SLX4YLR135W RBA50Q04418 439 aa1.39□□□□□ -2.19
SLX4YLR135W HSP31Q04432 237 aa1.39□□□□□ -2.19
SLX4YLR135W SIL1Q08199 421 aa1.39□□□□□ -2.19
SLX4YLR135W GEP3Q08622 556 aa1.39□□□□□ -2.19
SLX4YLR135W UAF30Q08747 228 aa1.39□□□□□ -2.19
SLX4YLR135W SPE3Q12074 293 aaKnown RBP1.39□□□□□ -2.19
SLX4YLR135W YDL009CQ12210 107 aa1.39□□□□□ -2.19
SLX4YLR135W GPM3Q12326 303 aa1.39□□□□□ -2.19
SLX4YLR135W SKS1Q12505 502 aa1.39□□□□□ -2.19
SLX4YLR135W CTF3Q12748 733 aa1.39□□□□□ -2.19
SLX4YLR135W TPM1P17536 199 aaKnown RBP1.38□□□□□ -2.19
SLX4YLR135W BUB3P26449 341 aa1.38□□□□□ -2.19
SLX4YLR135W PPZ1P26570 692 aa1.38□□□□□ -2.19
SLX4YLR135W BRF1P29056 596 aa1.38□□□□□ -2.19
SLX4YLR135W SWH1P35845 1188 aa1.38□□□□□ -2.19
SLX4YLR135W RXT2P38255 430 aa1.38□□□□□ -2.19
SLX4YLR135W MMS4P38257 691 aa1.38□□□□□ -2.19
SLX4YLR135W YHR054CP38780 354 aa1.38□□□□□ -2.19
SLX4YLR135W VHS2P40463 436 aa1.38□□□□□ -2.19
SLX4YLR135W LCB2P40970 561 aa1.38□□□□□ -2.19
SLX4YLR135W POP1P41812 875 aa1.38□□□□□ -2.19
SLX4YLR135W TDA7P53882 636 aaPredicted RBP1.38□□□□□ -2.19
SLX4YLR135W PEX25Q02969 394 aa1.38□□□□□ -2.19
SLX4YLR135W TAF12Q03761 539 aa1.38□□□□□ -2.19
SLX4YLR135W MRPL51Q06090 140 aaPredicted RBP1.38□□□□□ -2.19
SLX4YLR135W DCS1Q06151 350 aa1.38□□□□□ -2.19
SLX4YLR135W VPS74Q06385 345 aa1.38□□□□□ -2.19
SLX4YLR135W SYO1Q07395 620 aa1.38□□□□□ -2.19
SLX4YLR135W SRL1Q08673 210 aa1.38□□□□□ -2.19
SLX4YLR135W RUP1Q12242 671 aa1.38□□□□□ -2.19
SLX4YLR135W RPN5Q12250 445 aaKnown RBP1.38□□□□□ -2.19
SLX4YLR135W PAR32Q12515 295 aaKnown RBP1.38□□□□□ -2.19
SLX4YLR135W MTR10Q99189 972 aa1.38□□□□□ -2.19
SLX4YLR135W HIS4P00815 799 aaKnown RBP1.38□□□□□ -2.19
SLX4YLR135W ADE4P04046 510 aaKnown RBP1.38□□□□□ -2.19
SLX4YLR135W CDC23P16522 626 aa1.38□□□□□ -2.19
SLX4YLR135W SEC62P21825 274 aa1.38□□□□□ -2.19
SLX4YLR135W OPI1P21957 404 aa1.38□□□□□ -2.19
SLX4YLR135W RHB1P25378 209 aa1.38□□□□□ -2.19
SLX4YLR135W FUN19P28003 413 aaPredicted RBP1.38□□□□□ -2.19
SLX4YLR135W BEM1P29366 551 aa1.38□□□□□ -2.19
SLX4YLR135W ECM25P32525 599 aa1.38□□□□□ -2.19
SLX4YLR135W VPH1P32563 840 aaKnown RBP1.38□□□□□ -2.19
SLX4YLR135W FRE1P32791 686 aa1.38□□□□□ -2.19
SLX4YLR135W SIP2P34164 415 aaKnown RBP1.38□□□□□ -2.19
SLX4YLR135W HEL1P36113 551 aa1.38□□□□□ -2.19
SLX4YLR135W ASC1P38011 319 aaKnown RBP1.38□□□□□ -2.19
SLX4YLR135W DED81P38707 554 aaKnown RBP1.38□□□□□ -2.19
SLX4YLR135W GDI1P39958 451 aaKnown RBP1.38□□□□□ -2.19
SLX4YLR135W YND1P40009 630 aa1.38□□□□□ -2.19
SLX4YLR135W SER3P40054 469 aa1.38□□□□□ -2.19
SLX4YLR135W AZF1P41696 914 aa1.38□□□□□ -2.19
SLX4YLR135W RPS0BP46654 252 aaKnown RBP1.38□□□□□ -2.19
SLX4YLR135W YJL132WP47014 750 aa1.38□□□□□ -2.19
SLX4YLR135W RPN9Q04062 393 aaKnown RBP1.38□□□□□ -2.19
SLX4YLR135W FMP42Q04991 504 aa1.38□□□□□ -2.19
SLX4YLR135W YMR034CQ05131 434 aaPredicted RBP1.38□□□□□ -2.19
SLX4YLR135W HEL2Q05580 639 aaKnown RBP1.38□□□□□ -2.19
SLX4YLR135W NDL1Q06568 189 aa1.38□□□□□ -2.19
SLX4YLR135W SGT1Q08446 395 aa1.38□□□□□ -2.19
SLX4YLR135W DCI1Q08558 271 aa1.38□□□□□ -2.19
SLX4YLR135W RGT2Q12300 763 aa1.38□□□□□ -2.19
SLX4YLR135W RKM5Q12367 367 aa1.38□□□□□ -2.19
SLX4YLR135W SPT7P35177 1332 aa1.37□□□□□ -2.19
SLX4YLR135W CAR1P00812 333 aaKnown RBP1.37□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms