RNA–Protein interactions for RNA: YDL228C

YDL228C, Transcript of Dubious open reading frame, yeastyeast

Gene YDL228C, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDL228CYDL228C YJL049WP47048 450 aa3.95□□□□□ -1.78
YDL228CYDL228C AIF1P52923 378 aa3.95□□□□□ -1.78
YDL228CYDL228C RTS3P53289 263 aa3.95□□□□□ -1.78
YDL228CYDL228C RMI1Q02685 241 aa3.95□□□□□ -1.78
YDL228CYDL228C TRS23Q03784 219 aa3.95□□□□□ -1.78
YDL228CYDL228C VHS1Q03785 461 aa3.95□□□□□ -1.78
YDL228CYDL228C MTQ2Q03920 221 aaPredicted RBP3.95□□□□□ -1.78
YDL228CYDL228C YMR034CQ05131 434 aaPredicted RBP3.95□□□□□ -1.78
YDL228CYDL228C DIC1Q06143 298 aa3.95□□□□□ -1.78
YDL228CYDL228C SFH1Q06168 426 aa3.95□□□□□ -1.78
YDL228CYDL228C BRE4Q07660 1125 aa3.95□□□□□ -1.78
YDL228CYDL228C MED7Q08278 222 aa3.95□□□□□ -1.78
YDL228CYDL228C YDR056CQ12025 205 aa3.95□□□□□ -1.78
YDL228CYDL228C YLR053CQ12026 108 aa3.95□□□□□ -1.78
YDL228CYDL228C HAL9Q12180 1030 aa3.95□□□□□ -1.78
YDL228CYDL228C RGT2Q12300 763 aa3.95□□□□□ -1.78
YDL228CYDL228C GLE1Q12315 538 aa3.95□□□□□ -1.78
YDL228CYDL228C FRE7Q12333 620 aa3.95□□□□□ -1.78
YDL228CYDL228C SPT3P06844 337 aa3.94□□□□□ -1.78
YDL228CYDL228C TYR1P20049 452 aa3.94□□□□□ -1.78
YDL228CYDL228C ARG1P22768 420 aa3.94□□□□□ -1.78
YDL228CYDL228C CLB1P24868 471 aa3.94□□□□□ -1.78
YDL228CYDL228C YSC84P32793 468 aa3.94□□□□□ -1.78
YDL228CYDL228C SKT5P34226 696 aa3.94□□□□□ -1.78
YDL228CYDL228C RIM2P38127 377 aa3.94□□□□□ -1.78
YDL228CYDL228C UBS1P38290 277 aa3.94□□□□□ -1.78
YDL228CYDL228C YDR089WP38966 869 aa3.94□□□□□ -1.78
YDL228CYDL228C MET30P39014 640 aa3.94□□□□□ -1.78
YDL228CYDL228C DHH1P39517 506 aaKnown RBP3.94□□□□□ -1.78
YDL228CYDL228C EMP65P40085 556 aa3.94□□□□□ -1.78
YDL228CYDL228C VMA13P41807 478 aaKnown RBP3.94□□□□□ -1.78
YDL228CYDL228C YJR030CP47101 745 aa3.94□□□□□ -1.78
YDL228CYDL228C YJR149WP47177 404 aa3.94□□□□□ -1.78
YDL228CYDL228C MDM34P53083 459 aa3.94□□□□□ -1.78
YDL228CYDL228C ESF2P53743 316 aaKnown RBP3.94□□□□□ -1.78
YDL228CYDL228C SSY1Q03770 852 aa3.94□□□□□ -1.78
YDL228CYDL228C HPT1Q04178 221 aaKnown RBP3.94□□□□□ -1.78
YDL228CYDL228C TAF11Q04226 346 aa3.94□□□□□ -1.78
YDL228CYDL228C BCH1Q05029 724 aa3.94□□□□□ -1.78
YDL228CYDL228C STE23Q06010 1027 aa3.94□□□□□ -1.78
YDL228CYDL228C ENT4Q07872 247 aa3.94□□□□□ -1.78
YDL228CYDL228C YLR030WQ07967 263 aa3.94□□□□□ -1.78
YDL228CYDL228C YOR114WQ12219 294 aa3.94□□□□□ -1.78
YDL228CYDL228C MHT1Q12525 324 aa3.94□□□□□ -1.78
YDL228CYDL228C RPS21AP0C0V8 87 aaKnown RBP3.93□□□□□ -1.78
YDL228CYDL228C ART10P18634 518 aaKnown RBP3.93□□□□□ -1.78
YDL228CYDL228C RPB4P20433 221 aaPredicted RBP3.93□□□□□ -1.78
YDL228CYDL228C PTP1P25044 335 aa3.93□□□□□ -1.78
YDL228CYDL228C IMG1P25626 169 aa3.93□□□□□ -1.78
YDL228CYDL228C YCR090CP25654 182 aaKnown RBP3.93□□□□□ -1.78
YDL228CYDL228C BUB3P26449 341 aa3.93□□□□□ -1.78
YDL228CYDL228C PRO1P32264 428 aa3.93□□□□□ -1.78
YDL228CYDL228C NTH1P32356 751 aa3.93□□□□□ -1.78
YDL228CYDL228C HXT4P32467 576 aa3.93□□□□□ -1.78
YDL228CYDL228C HOG1P32485 435 aa3.93□□□□□ -1.78
YDL228CYDL228C NFU1P32860 256 aa3.93□□□□□ -1.78
YDL228CYDL228C RMA1P36001 430 aaKnown RBP3.93□□□□□ -1.78
YDL228CYDL228C KKQ8P36004 724 aa3.93□□□□□ -1.78
YDL228CYDL228C OAF3P36023 863 aa3.93□□□□□ -1.78
YDL228CYDL228C MUD2P36084 527 aaKnown RBP3.93□□□□□ -1.78
YDL228CYDL228C MCM7P38132 845 aa3.93□□□□□ -1.78
YDL228CYDL228C YBR032WP38223 100 aa3.93□□□□□ -1.78
YDL228CYDL228C PTC7P38797 343 aa3.93□□□□□ -1.78
YDL228CYDL228C REV7P38927 245 aa3.93□□□□□ -1.78
YDL228CYDL228C HXT6P39003 570 aaKnown RBP3.93□□□□□ -1.78
YDL228CYDL228C HXT7P39004 570 aa3.93□□□□□ -1.78
YDL228CYDL228C NDE1P40215 560 aa3.93□□□□□ -1.78
YDL228CYDL228C PRM2P40534 656 aa3.93□□□□□ -1.78
YDL228CYDL228C AXL1P40851 1208 aa3.93□□□□□ -1.78
YDL228CYDL228C YRB1P41920 201 aaKnown RBP3.93□□□□□ -1.78
YDL228CYDL228C ALR2P43553 858 aa3.93□□□□□ -1.78
YDL228CYDL228C YGL176CP46945 554 aa3.93□□□□□ -1.78
YDL228CYDL228C PAN2P53010 1115 aaPredicted RBP3.93□□□□□ -1.78
YDL228CYDL228C SHY1P53266 389 aa3.93□□□□□ -1.78
YDL228CYDL228C UBX4P54730 416 aa3.93□□□□□ -1.78
YDL228CYDL228C NHP10Q03435 203 aa3.93□□□□□ -1.78
YDL228CYDL228C GAS3Q03655 524 aa3.93□□□□□ -1.78
YDL228CYDL228C ROY1Q04847 553 aa3.93□□□□□ -1.78
YDL228CYDL228C GPB1Q08886 897 aa3.93□□□□□ -1.78
YDL228CYDL228C TMA46Q12000 345 aaKnown RBP3.93□□□□□ -1.78
YDL228CYDL228C ATG29Q12092 213 aa3.93□□□□□ -1.78
YDL228CYDL228C YPL245WQ12179 454 aaKnown RBP3.93□□□□□ -1.78
YDL228CYDL228C YPR011CQ12251 326 aa3.93□□□□□ -1.78
YDL228CYDL228C RRP42Q12277 265 aaPredicted RBP3.93□□□□□ -1.78
YDL228CYDL228C SEC39Q12745 709 aa3.93□□□□□ -1.78
YDL228CYDL228C MEC1P38111 2368 aa3.93□□□□□ -1.78
YDL228CYDL228C LEU4P06208 619 aaKnown RBP3.92□□□□□ -1.78
YDL228CYDL228C YMR085WP0CF18 432 aa3.92□□□□□ -1.78
YDL228CYDL228C BAS1P22035 811 aa3.92□□□□□ -1.78
YDL228CYDL228C DBP2P24783 546 aaKnown RBP3.92□□□□□ -1.78
YDL228CYDL228C TRX3P25372 127 aa3.92□□□□□ -1.78
YDL228CYDL228C CHA1P25379 360 aaKnown RBP3.92□□□□□ -1.78
YDL228CYDL228C CRM1P30822 1084 aaKnown RBP3.92□□□□□ -1.78
YDL228CYDL228C SIN4P32259 974 aa3.92□□□□□ -1.78
YDL228CYDL228C MVD1P32377 396 aaKnown RBP3.92□□□□□ -1.78
YDL228CYDL228C LYP1P32487 611 aa3.92□□□□□ -1.78
YDL228CYDL228C PUB1P32588 453 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
YDL228CYDL228C TAF14P35189 244 aa3.92□□□□□ -1.78
YDL228CYDL228C RRN3P36070 627 aa3.92□□□□□ -1.78
YDL228CYDL228C RRN10P38204 145 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms