RNA–Protein interactions for RNA: YNL054W-A

YNL054W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YNL054W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-AYNL054W-A RPL1BP0CX44 217 aaKnown RBP4.46□□□□□ -1.7
YNL054W-AYNL054W-A AIM17P23180 465 aaKnown RBP4.46□□□□□ -1.7
YNL054W-AYNL054W-A GID7P25569 745 aa4.46□□□□□ -1.7
YNL054W-AYNL054W-A HIR2P32480 875 aa4.46□□□□□ -1.7
YNL054W-AYNL054W-A SPC34P36131 295 aa4.46□□□□□ -1.7
YNL054W-AYNL054W-A RFC3P38629 340 aa4.46□□□□□ -1.7
YNL054W-AYNL054W-A OCA1P50946 238 aaPredicted RBP4.46□□□□□ -1.7
YNL054W-AYNL054W-A ALT2P52892 507 aa4.46□□□□□ -1.7
YNL054W-AYNL054W-A LGE1Q02796 332 aaKnown RBP4.46□□□□□ -1.7
YNL054W-AYNL054W-A SEG1Q04279 960 aa4.46□□□□□ -1.7
YNL054W-AYNL054W-A HEL2Q05580 639 aaKnown RBP4.46□□□□□ -1.7
YNL054W-AYNL054W-A MDM30Q05930 598 aa4.46□□□□□ -1.7
YNL054W-AYNL054W-A RKM1Q08961 583 aaPredicted RBP4.46□□□□□ -1.7
YNL054W-AYNL054W-A ATX2Q12067 313 aa4.46□□□□□ -1.7
YNL054W-AYNL054W-A SKS1Q12505 502 aa4.46□□□□□ -1.7
YNL054W-AYNL054W-A BRR1Q99177 341 aaPredicted RBP4.46□□□□□ -1.7
YNL054W-AYNL054W-A BAR1P12630 587 aa4.45□□□□□ -1.7
YNL054W-AYNL054W-A TYR1P20049 452 aa4.45□□□□□ -1.7
YNL054W-AYNL054W-A URA4P20051 364 aa4.45□□□□□ -1.7
YNL054W-AYNL054W-A CLN1P20437 546 aa4.45□□□□□ -1.7
YNL054W-AYNL054W-A KRE2P27809 442 aa4.45□□□□□ -1.7
YNL054W-AYNL054W-A YPK3P38070 525 aa4.45□□□□□ -1.7
YNL054W-AYNL054W-A RTS2P40962 232 aa4.45□□□□□ -1.7
YNL054W-AYNL054W-A FET5P43561 622 aa4.45□□□□□ -1.7
YNL054W-AYNL054W-A CUL3P53202 744 aa4.45□□□□□ -1.7
YNL054W-AYNL054W-A RIM13Q03792 727 aa4.45□□□□□ -1.7
YNL054W-AYNL054W-A RSF1Q05043 376 aa4.45□□□□□ -1.7
YNL054W-AYNL054W-A ECI1Q05871 280 aa4.45□□□□□ -1.7
YNL054W-AYNL054W-A THI7Q05998 598 aa4.45□□□□□ -1.7
YNL054W-AYNL054W-A SSK1Q07084 712 aa4.45□□□□□ -1.7
YNL054W-AYNL054W-A GSH2Q08220 491 aa4.45□□□□□ -1.7
YNL054W-AYNL054W-A KEL3Q08979 651 aaPredicted RBP4.45□□□□□ -1.7
YNL054W-AYNL054W-A PPZ1P26570 692 aa4.44□□□□□ -1.7
YNL054W-AYNL054W-A SIN4P32259 974 aa4.44□□□□□ -1.7
YNL054W-AYNL054W-A ANP1P32629 500 aa4.44□□□□□ -1.7
YNL054W-AYNL054W-A PEX2P32800 271 aa4.44□□□□□ -1.7
YNL054W-AYNL054W-A PHD1P36093 366 aa4.44□□□□□ -1.7
YNL054W-AYNL054W-A ARA1P38115 344 aa4.44□□□□□ -1.7
YNL054W-AYNL054W-A YHR054CP38780 354 aa4.44□□□□□ -1.7
YNL054W-AYNL054W-A FLO5P38894 1075 aa4.44□□□□□ -1.7
YNL054W-AYNL054W-A CCT2P39076 527 aaKnown RBP4.44□□□□□ -1.7
YNL054W-AYNL054W-A YER130CP39959 443 aa4.44□□□□□ -1.7
YNL054W-AYNL054W-A VRG4P40107 337 aa4.44□□□□□ -1.7
YNL054W-AYNL054W-A SYG1P40528 902 aa4.44□□□□□ -1.7
YNL054W-AYNL054W-A RMD9P53140 646 aaKnown RBP4.44□□□□□ -1.7
YNL054W-AYNL054W-A IZH1Q03419 316 aa4.44□□□□□ -1.7
YNL054W-AYNL054W-A YDR286CQ05530 114 aa4.44□□□□□ -1.7
YNL054W-AYNL054W-A PGC1Q08959 321 aa4.44□□□□□ -1.7
YNL054W-AYNL054W-A HER1Q12276 1246 aa4.44□□□□□ -1.7
YNL054W-AYNL054W-A YNL162W-AQ3E7A8 72 aa4.44□□□□□ -1.7
YNL054W-AYNL054W-A LPD1P09624 499 aaKnown RBP4.43□□□□□ -1.7
YNL054W-AYNL054W-A MDM10P18409 493 aa4.43□□□□□ -1.7
YNL054W-AYNL054W-A YCP4P25349 247 aaKnown RBP4.43□□□□□ -1.7
YNL054W-AYNL054W-A BRF1P29056 596 aa4.43□□□□□ -1.7
YNL054W-AYNL054W-A UTR4P32626 227 aa4.43□□□□□ -1.7
YNL054W-AYNL054W-A GYP6P32806 458 aa4.43□□□□□ -1.7
YNL054W-AYNL054W-A PDR3P33200 976 aa4.43□□□□□ -1.7
YNL054W-AYNL054W-A PCL6P40038 420 aa4.43□□□□□ -1.7
YNL054W-AYNL054W-A IAH1P41734 238 aa4.43□□□□□ -1.7
YNL054W-AYNL054W-A PSA1P41940 361 aaKnown RBP4.43□□□□□ -1.7
YNL054W-AYNL054W-A YJL132WP47014 750 aa4.43□□□□□ -1.7
YNL054W-AYNL054W-A YNL181WP53878 407 aa4.43□□□□□ -1.7
YNL054W-AYNL054W-A ESBP6P53918 673 aa4.43□□□□□ -1.7
YNL054W-AYNL054W-A SMA1Q02651 245 aa4.43□□□□□ -1.7
YNL054W-AYNL054W-A YMR130WQ04223 302 aa4.43□□□□□ -1.7
YNL054W-AYNL054W-A YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
YNL054W-AYNL054W-A THI20Q08224 551 aa4.43□□□□□ -1.7
YNL054W-AYNL054W-A DCI1Q08558 271 aa4.43□□□□□ -1.7
YNL054W-AYNL054W-A BSC1Q12140 328 aa4.43□□□□□ -1.7
YNL054W-AYNL054W-A ARP6Q12509 438 aa4.43□□□□□ -1.7
YNL054W-AYNL054W-A SPT7P35177 1332 aa4.43□□□□□ -1.7
YNL054W-AYNL054W-A RPL42AP0CX27 106 aaKnown RBP4.42□□□□□ -1.7
YNL054W-AYNL054W-A RPL42BP0CX28 106 aaKnown RBP4.42□□□□□ -1.7
YNL054W-AYNL054W-A ARO3P14843 370 aaKnown RBP4.42□□□□□ -1.7
YNL054W-AYNL054W-A GLK1P17709 500 aaKnown RBP4.42□□□□□ -1.7
YNL054W-AYNL054W-A SPO7P18410 259 aa4.42□□□□□ -1.7
YNL054W-AYNL054W-A YCR007CP25354 239 aa4.42□□□□□ -1.7
YNL054W-AYNL054W-A FUN19P28003 413 aaPredicted RBP4.42□□□□□ -1.7
YNL054W-AYNL054W-A MCM4P30665 933 aaKnown RBP4.42□□□□□ -1.7
YNL054W-AYNL054W-A NIP1P32497 812 aaKnown RBP4.42□□□□□ -1.7
YNL054W-AYNL054W-A PRP21P32524 280 aaPredicted RBP4.42□□□□□ -1.7
YNL054W-AYNL054W-A CUE2P36075 443 aaKnown RBP4.42□□□□□ -1.7
YNL054W-AYNL054W-A VHC1P38329 1120 aa4.42□□□□□ -1.7
YNL054W-AYNL054W-A GUF1P46943 645 aa4.42□□□□□ -1.7
YNL054W-AYNL054W-A SLD5Q03406 294 aa4.42□□□□□ -1.7
YNL054W-AYNL054W-A BNA5Q05979 453 aa4.42□□□□□ -1.7
YNL054W-AYNL054W-A DCS1Q06151 350 aa4.42□□□□□ -1.7
YNL054W-AYNL054W-A YLR456WQ06199 204 aa4.42□□□□□ -1.7
YNL054W-AYNL054W-A VPS54Q12071 889 aa4.42□□□□□ -1.7
YNL054W-AYNL054W-A SMF3Q12078 473 aaPredicted RBP4.42□□□□□ -1.7
YNL054W-AYNL054W-A CFT2Q12102 859 aaPredicted RBP4.42□□□□□ -1.7
YNL054W-AYNL054W-A FRE6Q12473 712 aa4.42□□□□□ -1.7
YNL054W-AYNL054W-A MES1P00958 751 aaKnown RBP4.41□□□□□ -1.7
YNL054W-AYNL054W-A KRR1P25586 316 aaPredicted RBP4.41□□□□□ -1.7
YNL054W-AYNL054W-A POT1P27796 417 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
YNL054W-AYNL054W-A ERG7P38604 731 aa4.41□□□□□ -1.7
YNL054W-AYNL054W-A ATF1P40353 525 aa4.41□□□□□ -1.7
YNL054W-AYNL054W-A VHS2P40463 436 aa4.41□□□□□ -1.7
YNL054W-AYNL054W-A RPS0BP46654 252 aaKnown RBP4.41□□□□□ -1.7
YNL054W-AYNL054W-A BNA3P47039 444 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 38.8 ms