RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W GAL7P08431 366 aa6.92□□□□□ -1.3
HDA1YNL021W PET111P08468 800 aa6.92□□□□□ -1.3
HDA1YNL021W PUT4P15380 627 aa6.92□□□□□ -1.3
HDA1YNL021W CNE1P27825 502 aa6.92□□□□□ -1.3
HDA1YNL021W YBL055CP34220 418 aaPredicted RBP6.92□□□□□ -1.3
HDA1YNL021W ELF1P36053 145 aa6.92□□□□□ -1.3
HDA1YNL021W YBR139WP38109 508 aa6.92□□□□□ -1.3
HDA1YNL021W RFT1P38206 574 aaPredicted RBP6.92□□□□□ -1.3
HDA1YNL021W RFC3P38629 340 aa6.92□□□□□ -1.3
HDA1YNL021W FAD1P38913 306 aa6.92□□□□□ -1.3
HDA1YNL021W SHC1P39000 512 aa6.92□□□□□ -1.3
HDA1YNL021W PIG2P40187 538 aa6.92□□□□□ -1.3
HDA1YNL021W AIM20P40451 204 aa6.92□□□□□ -1.3
HDA1YNL021W COS5P47187 383 aa6.92□□□□□ -1.3
HDA1YNL021W KTR5P53966 522 aaPredicted RBP6.92□□□□□ -1.3
HDA1YNL021W SKO1Q02100 647 aa6.92□□□□□ -1.3
HDA1YNL021W MRPL1Q04599 285 aa6.92□□□□□ -1.3
HDA1YNL021W COQ9Q05779 260 aa6.92□□□□□ -1.3
HDA1YNL021W YDL242WQ07746 117 aa6.92□□□□□ -1.3
HDA1YNL021W COS7Q07788 383 aa6.92□□□□□ -1.3
HDA1YNL021W TY3A-GQ12173 290 aa6.92□□□□□ -1.3
HDA1YNL021W TY3A-IQ99219 290 aa6.92□□□□□ -1.3
HDA1YNL021W MAK31P23059 88 aa6.92□□□□□ -1.3
HDA1YNL021W CDC15P27636 974 aa6.92□□□□□ -1.3
HDA1YNL021W NTC20P38302 140 aaPredicted RBP6.92□□□□□ -1.3
HDA1YNL021W VPS73P53142 486 aaKnown RBP6.92□□□□□ -1.3
HDA1YNL021W YGR130CP53278 816 aa6.92□□□□□ -1.3
HDA1YNL021W NSG2P53898 299 aa6.92□□□□□ -1.3
HDA1YNL021W ORC3P54790 616 aa6.92□□□□□ -1.3
HDA1YNL021W RSM28Q03430 361 aa6.92□□□□□ -1.3
HDA1YNL021W YDL177CQ12257 170 aa6.92□□□□□ -1.3
HDA1YNL021W DFG16Q99234 619 aa6.92□□□□□ -1.3
HDA1YNL021W FLO1P32768 1537 aa6.92□□□□□ -1.3
HDA1YNL021W CBP2P03874 630 aaPredicted RBP6.91□□□□□ -1.3
HDA1YNL021W ILV2P07342 687 aaKnown RBP6.91□□□□□ -1.3
HDA1YNL021W MRPL25P23369 157 aa6.91□□□□□ -1.3
HDA1YNL021W CTP1P38152 299 aa6.91□□□□□ -1.3
HDA1YNL021W DIA4P38705 446 aaPredicted RBP6.91□□□□□ -1.3
HDA1YNL021W MSC1Q03104 513 aa6.91□□□□□ -1.3
HDA1YNL021W MYO5Q04439 1219 aaKnown RBP6.91□□□□□ -1.3
HDA1YNL021W BAG7Q12128 409 aa6.91□□□□□ -1.3
HDA1YNL021W YDR061WQ12298 539 aa6.91□□□□□ -1.3
HDA1YNL021W CBP1P07252 654 aa6.91□□□□□ -1.3
HDA1YNL021W CLN1P20437 546 aa6.91□□□□□ -1.3
HDA1YNL021W ZTA1P38230 334 aaKnown RBP6.91□□□□□ -1.3
HDA1YNL021W SPT8P38915 602 aa6.91□□□□□ -1.3
HDA1YNL021W LOC1P43586 204 aaPredicted RBP6.91□□□□□ -1.3
HDA1YNL021W EGD1Q02642 157 aaKnown RBP6.91□□□□□ -1.3
HDA1YNL021W YDL176WQ12027 708 aa6.91□□□□□ -1.3
HDA1YNL021W MLH3Q12083 715 aa6.91□□□□□ -1.3
HDA1YNL021W URA4P20051 364 aa6.9□□□□□ -1.3
HDA1YNL021W ELO1P39540 310 aa6.9□□□□□ -1.3
HDA1YNL021W CSM2P40465 213 aa6.9□□□□□ -1.3
HDA1YNL021W YPT11P48559 417 aa6.9□□□□□ -1.3
HDA1YNL021W PAN2P53010 1115 aaPredicted RBP6.9□□□□□ -1.3
HDA1YNL021W VPS63O13549 108 aa6.89□□□□□ -1.31
HDA1YNL021W SCH9P11792 824 aaKnown RBP6.89□□□□□ -1.31
HDA1YNL021W MER1P16523 270 aa6.89□□□□□ -1.31
HDA1YNL021W ART10P18634 518 aaKnown RBP6.89□□□□□ -1.31
HDA1YNL021W RNR3P21672 869 aaKnown RBP6.89□□□□□ -1.31
HDA1YNL021W ADH7P25377 361 aa6.89□□□□□ -1.31
HDA1YNL021W MVD1P32377 396 aaKnown RBP6.89□□□□□ -1.31
HDA1YNL021W SNU114P36048 1008 aaKnown RBP6.89□□□□□ -1.31
HDA1YNL021W RPC37P36121 282 aa6.89□□□□□ -1.31
HDA1YNL021W LIN1P38852 340 aaPredicted RBP6.89□□□□□ -1.31
HDA1YNL021W YJL107CP42947 387 aa6.89□□□□□ -1.31
HDA1YNL021W YGL138CP53122 345 aa6.89□□□□□ -1.31
HDA1YNL021W YNR014WP53719 212 aa6.89□□□□□ -1.31
HDA1YNL021W SMA2Q04658 369 aa6.89□□□□□ -1.31
HDA1YNL021W STE23Q06010 1027 aa6.89□□□□□ -1.31
HDA1YNL021W YLR413WQ06689 675 aa6.89□□□□□ -1.31
HDA1YNL021W MRPL23Q12487 163 aaPredicted RBP6.89□□□□□ -1.31
HDA1YNL021W NBL1Q3E7Y6 73 aa6.89□□□□□ -1.31
HDA1YNL021W YLR278CQ05854 1341 aa6.89□□□□□ -1.31
HDA1YNL021W HOM2P13663 365 aaKnown RBP6.89□□□□□ -1.31
HDA1YNL021W YKT6P36015 200 aaKnown RBP6.89□□□□□ -1.31
HDA1YNL021W MMS4P38257 691 aa6.89□□□□□ -1.31
HDA1YNL021W MSG5P38590 489 aa6.89□□□□□ -1.31
HDA1YNL021W IMD2P38697 523 aaKnown RBP6.89□□□□□ -1.31
HDA1YNL021W ETP1P38748 585 aaKnown RBP6.89□□□□□ -1.31
HDA1YNL021W MNN9P39107 395 aaKnown RBP6.89□□□□□ -1.31
HDA1YNL021W VHS2P40463 436 aa6.89□□□□□ -1.31
HDA1YNL021W HPF1Q05164 967 aa6.89□□□□□ -1.31
HDA1YNL021W SMD2Q06217 110 aaKnown RBP6.89□□□□□ -1.31
HDA1YNL021W YFH1Q07540 174 aa6.89□□□□□ -1.31
HDA1YNL021W AEP3Q12089 606 aa6.89□□□□□ -1.31
HDA1YNL021W GPA1P08539 472 aa6.88□□□□□ -1.31
HDA1YNL021W KRS1P15180 591 aaKnown RBP6.88□□□□□ -1.31
HDA1YNL021W MSB1P21339 1137 aaKnown RBP6.88□□□□□ -1.31
HDA1YNL021W CAD1P24813 409 aaKnown RBP6.88□□□□□ -1.31
HDA1YNL021W ASC1P38011 319 aaKnown RBP6.88□□□□□ -1.31
HDA1YNL021W PCI8P40512 444 aa6.88□□□□□ -1.31
HDA1YNL021W OPT1P40897 799 aa6.88□□□□□ -1.31
HDA1YNL021W NOP12Q08208 459 aaKnown RBP6.88□□□□□ -1.31
HDA1YNL021W ULA1Q12059 462 aa6.88□□□□□ -1.31
HDA1YNL021W DMC1P25453 334 aa6.88□□□□□ -1.31
HDA1YNL021W PRO3P32263 286 aaKnown RBP6.88□□□□□ -1.31
HDA1YNL021W GDT1P38301 280 aaPredicted RBP6.88□□□□□ -1.31
HDA1YNL021W MSR1P38714 643 aa6.88□□□□□ -1.31
HDA1YNL021W TOM71P38825 639 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms