RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A BSC2Q05611 235 aa12.28□□□□□ -0.44
LSM3YLR438C-A HAL9Q12180 1030 aa12.28□□□□□ -0.44
LSM3YLR438C-A RPN5Q12250 445 aaKnown RBP12.28□□□□□ -0.44
LSM3YLR438C-A RPS4AP0CX35 261 aaKnown RBP12.27□□□□□ -0.45
LSM3YLR438C-A RPS4BP0CX36 261 aaKnown RBP12.27□□□□□ -0.45
LSM3YLR438C-A SPS22P25380 463 aa12.27□□□□□ -0.45
LSM3YLR438C-A ZIP1P31111 875 aa12.27□□□□□ -0.45
LSM3YLR438C-A HES1P35843 434 aa12.27□□□□□ -0.45
LSM3YLR438C-A EMC3P36039 253 aa12.27□□□□□ -0.45
LSM3YLR438C-A RRN10P38204 145 aa12.27□□□□□ -0.45
LSM3YLR438C-A AXL2P38928 823 aa12.27□□□□□ -0.45
LSM3YLR438C-A LYS1P38998 373 aaRIP-Chip data12.27□□□□□ -0.45not detected
LSM3YLR438C-A APQ12P40532 138 aa12.27□□□□□ -0.45
LSM3YLR438C-A FMP32P43557 207 aa12.27□□□□□ -0.45
LSM3YLR438C-A HXT16P47185 567 aa12.27□□□□□ -0.45
LSM3YLR438C-A ARE2P53629 642 aaKnown RBP12.27□□□□□ -0.45
LSM3YLR438C-A MPS1P54199 764 aa12.27□□□□□ -0.45
LSM3YLR438C-A HXT15P54854 567 aa12.27□□□□□ -0.45
LSM3YLR438C-A SDH1Q00711 640 aa12.27□□□□□ -0.45
LSM3YLR438C-A BNA5Q05979 453 aa12.27□□□□□ -0.45
LSM3YLR438C-A BCP1Q06338 283 aa12.27□□□□□ -0.45
LSM3YLR438C-A YLR413WQ06689 675 aa12.27□□□□□ -0.45
LSM3YLR438C-A NMD4Q12129 218 aa12.27□□□□□ -0.45
LSM3YLR438C-A NSL1Q12143 216 aa12.27□□□□□ -0.45
LSM3YLR438C-A YLL054CQ12244 843 aa12.27□□□□□ -0.45
LSM3YLR438C-A ATP4P05626 244 aa12.26□□□□□ -0.45
LSM3YLR438C-A GCD2P12754 651 aaPredicted RBP12.26□□□□□ -0.45
LSM3YLR438C-A PDC5P16467 563 aaKnown RBP12.26□□□□□ -0.45
LSM3YLR438C-A CCA1P21269 546 aa12.26□□□□□ -0.45
LSM3YLR438C-A TRX3P25372 127 aa12.26□□□□□ -0.45
LSM3YLR438C-A PHO91P27514 894 aa12.26□□□□□ -0.45
LSM3YLR438C-A SPT16P32558 1035 aaKnown RBP12.26□□□□□ -0.45
LSM3YLR438C-A ATO2P32907 282 aa12.26□□□□□ -0.45
LSM3YLR438C-A RGA1P39083 1007 aa12.26□□□□□ -0.45
LSM3YLR438C-A ERV46P39727 415 aa12.26□□□□□ -0.45
LSM3YLR438C-A AZF1P41696 914 aa12.26□□□□□ -0.45
LSM3YLR438C-A IAH1P41734 238 aa12.26□□□□□ -0.45
LSM3YLR438C-A SEC26P41810 973 aaKnown RBP12.26□□□□□ -0.45
LSM3YLR438C-A YJL049WP47048 450 aa12.26□□□□□ -0.45
LSM3YLR438C-A GIP3Q03016 1276 aa12.26□□□□□ -0.45
LSM3YLR438C-A YDR476CQ03362 224 aa12.26□□□□□ -0.45
LSM3YLR438C-A EAF1Q06337 982 aa12.26□□□□□ -0.45
LSM3YLR438C-A NTO1Q12311 748 aa12.26□□□□□ -0.45
LSM3YLR438C-A YDR262WQ12331 272 aa12.26□□□□□ -0.45
LSM3YLR438C-A RAS2P01120 322 aaKnown RBP12.25□□□□□ -0.45
LSM3YLR438C-A TRM1P15565 570 aaKnown RBP12.25□□□□□ -0.45
LSM3YLR438C-A STE14P32584 239 aa12.25□□□□□ -0.45
LSM3YLR438C-A CDC13P32797 924 aaKnown RBP12.25□□□□□ -0.45
LSM3YLR438C-A KKQ8P36004 724 aa12.25□□□□□ -0.45
LSM3YLR438C-A APT2P36973 181 aa12.25□□□□□ -0.45
LSM3YLR438C-A CBP4P37267 147 aa12.25□□□□□ -0.45
LSM3YLR438C-A MET30P39014 640 aa12.25□□□□□ -0.45
LSM3YLR438C-A AYR1P40471 297 aa12.25□□□□□ -0.45
LSM3YLR438C-A MNT3P40549 630 aa12.25□□□□□ -0.45
LSM3YLR438C-A SUM1P46676 1062 aa12.25□□□□□ -0.45
LSM3YLR438C-A EFR3Q03653 782 aaKnown RBP12.25□□□□□ -0.45
LSM3YLR438C-A MTQ2Q03920 221 aaPredicted RBP12.25□□□□□ -0.45
LSM3YLR438C-A OPT2Q06593 877 aa12.25□□□□□ -0.45
LSM3YLR438C-A OSW1Q08692 278 aa12.25□□□□□ -0.45
LSM3YLR438C-A YIG1Q08956 461 aa12.25□□□□□ -0.45
LSM3YLR438C-A YLR111WQ12528 110 aa12.25□□□□□ -0.45
LSM3YLR438C-A MST1P07236 462 aa12.24□□□□□ -0.45
LSM3YLR438C-A KAR1P11927 433 aa12.24□□□□□ -0.45
LSM3YLR438C-A FUR1P18562 216 aaKnown RBP12.24□□□□□ -0.45
LSM3YLR438C-A TYR1P20049 452 aa12.24□□□□□ -0.45
LSM3YLR438C-A MAD2P40958 196 aa12.24□□□□□ -0.45
LSM3YLR438C-A AIM22P47051 409 aa12.24□□□□□ -0.45
LSM3YLR438C-A UPF3P48412 387 aaKnown RBP12.24□□□□□ -0.45
LSM3YLR438C-A SDT1P53078 280 aa12.24□□□□□ -0.45
LSM3YLR438C-A GOR1P53839 350 aa12.24□□□□□ -0.45
LSM3YLR438C-A PRO2P54885 456 aaKnown RBP12.24□□□□□ -0.45
LSM3YLR438C-A ROY1Q04847 553 aa12.24□□□□□ -0.45
LSM3YLR438C-A DYN3Q04949 312 aa12.24□□□□□ -0.45
LSM3YLR438C-A DIN7Q12086 430 aa12.24□□□□□ -0.45
LSM3YLR438C-A RRP12Q12754 1228 aaKnown RBP12.24□□□□□ -0.45
LSM3YLR438C-A LAG2Q92325 660 aa12.24□□□□□ -0.45
LSM3YLR438C-A Q0010Q9ZZX9 128 aa12.24□□□□□ -0.45
LSM3YLR438C-A TPK2P06245 380 aa12.23□□□□□ -0.45
LSM3YLR438C-A CSM1P25651 190 aa12.23□□□□□ -0.45
LSM3YLR438C-A BUB3P26449 341 aa12.23□□□□□ -0.45
LSM3YLR438C-A PET127P32606 800 aa12.23□□□□□ -0.45
LSM3YLR438C-A COS111P38308 924 aa12.23□□□□□ -0.45
LSM3YLR438C-A PLB1P39105 664 aa12.23□□□□□ -0.45
LSM3YLR438C-A PTR3P43606 678 aa12.23□□□□□ -0.45
LSM3YLR438C-A RPM2Q02773 1202 aa12.23□□□□□ -0.45
LSM3YLR438C-A YMR010WQ03687 405 aa12.23□□□□□ -0.45
LSM3YLR438C-A MUS81Q04149 632 aaPredicted RBP12.23□□□□□ -0.45
LSM3YLR438C-A PTP1P25044 335 aa12.22□□□□□ -0.45
LSM3YLR438C-A RVS161P25343 265 aaKnown RBP12.22□□□□□ -0.45
LSM3YLR438C-A ADE1P27616 306 aa12.22□□□□□ -0.45
LSM3YLR438C-A ATP7P30902 174 aa12.22□□□□□ -0.45
LSM3YLR438C-A ATG7P38862 630 aa12.22□□□□□ -0.45
LSM3YLR438C-A LRO1P40345 661 aa12.22□□□□□ -0.45
LSM3YLR438C-A YGR250CP53316 781 aaKnown RBP12.22□□□□□ -0.45
LSM3YLR438C-A MMT1Q03218 510 aa12.22□□□□□ -0.45
LSM3YLR438C-A YHC1Q05900 231 aaKnown RBP12.22□□□□□ -0.45
LSM3YLR438C-A GYP1Q08484 637 aa12.22□□□□□ -0.45
LSM3YLR438C-A JLP1Q12358 412 aa12.22□□□□□ -0.45
LSM3YLR438C-A RKM5Q12367 367 aa12.22□□□□□ -0.45
LSM3YLR438C-A RPL1AP0CX43 217 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms